Ll_transcript_447916

• Id Trinity: TRINITY_DN51879_c1_g1_i4
• Name Transcript: Ll_transcript_447916
• Sequence: AATACAACGGCTCCTCGTCATGTCTAACTGATTCTTAATTTGAGGTGTATGTTTCAATATGAACTTTGACCTCTTTCTATGCCTGGTTTCATCAGGTGCA TCTTTCTAATTTCTGAAGCATCTGATTCACAGGGCGCTGTTGAGAGTTTACTAGAGCGTAGTTCATATGTTCAACTTGCCGATGGATCCCTGTTTCCAAT AGATGAGCAATGCAGGGAACTACTTCTTCAAAGACTCCTGGAGATGAGTTCGAAAGGATTGCGTTGCTTGGGTATGGCATATAAGGATAACTTGGGAGAA TTTTCAGATTATTATGCAGATACTCATCCTGCCCATAAGAAGTTGCTTGATCCAGCATGCTACTCATTAATTGAAAGTGATCTAGTTTTTGTTGGTGTTG TTGGTATAAGAGACCCTCCGCGTCCGGAAGTTCACAAAGCAATTGAGGATTGCAAGAAAGCTGGTATTAGAGTTATGGTAATCACCGGAGATAATAAGTC AACAGCAGAGGTTATTTGCCGTGAGATCAAACTGTTCTCTAAAGATGAGGATCTCACATTGAAAAGTCTGACAGGTAAGGAATTCACATCTCTTTCTCAT TCAGAAAAAGTTCAAATATTGTCAAGACCTGGAGGCAAGGTTTTCTCTCGAGCTGAGCCGAGACACAAGCAAGACATTGTGAGGCTACTGAAAGATCTCG GGGATATTGTTGCAATGACTGGAGATGGTGTGAATGATGCACCTGCACTTAAGCTTGCTGACATAGGGATTGCTATGGGCATAACTGGAACAGAGGTTGC AAAAGAAGCTTCAGATATGGTGCTTGCAGATGACAATTTTAGCACCATTGTTTCAGCTATTGCCGAGGGTCGCTCGATTTACAATAACATGAAAGCTTTT ATCAGGTACATGATATCATCAAATGTTGGAGAAGTAATATCCATA
• Tissue: pods
• Gene name: LI_gene_188246;
• Additional information: details;

Expression of Ll_transcript_447916

FPKM

• PAB: 0
• PNAB: 0.5
• PS1: 0
• PS2: 0.3
• PS3: 0.4
• PW1: 0.4
• PW2: 0.7
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_447916

• Blastp: Calcium-transporting ATPase, endoplasmic reticulum-type from Lycopersicon with 80.15% of identity
• Blastx: Calcium-transporting ATPase, endoplasmic reticulum-type from Lycopersicon with 80.15% of identity
• Eggnog: P-type atpase(COG0474)
• Kegg: Link to kegg annotations (543554)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019422322.1)
• Pfam: haloacid dehalogenase-like hydrolase (PF00702.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;