Id Trinity | TRINITY_DN51879_c2_g3_i19 |
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Name Transcript | Ll_transcript_447966 |
Sequence | TGTATAAAAAAATATTCAGAGGAAGACCAACTTGATGTTGTGTGTACTGTGTATCTTTGCAGTACCCATTTGAGCATTATTCTATTTGTCTATCTTGCAC TTATAGTTTTTTCTCCTTTTGATTGCAGATTTTCCTGTCTTAGTTCTAGATGTTCAATAACAAATACTGATATACATCTGGATCATATCACAACGGATGA CACTGAAGGAGCGTCTTCAGCTGTTGAACCTGAATGTCTGGTGCCAATAGTTAAACTCAATTCTGATATTCTCGAGACTGTATCTTCGAACGTACTTAAT GAAGCCACATTTGTAGATACTCTCTTGACAGCATTACCTGTAGGTTATTTTCCTGCTTTAGGGCGTCAATAAGAATAACCTCACTATTTCTCATTTTTCA TGGTGTGTTCCACAGATTTTGACTGCTGAAGAGCAACATGCCCTAGCAGCTACACCAGCACACCCAGCTGGGTTACATGGTGGGATGATTCTCAGTCTTG CTAACTCCAACTATAACATGGTCGTTTATGAGAATGTTGTTATAGTTCCTGTTACTGAGATTTATGTAGGATTACTTTAACTGGAGTTTCCATTTGGGAT AAATTGAACTGATAACAGATTAAATGCACTTCACTTTTATTTCGGCATCTTGATACTATGTAGGAAAATAGACTGAGATCTTCATGCTTTTTGGCAATTA GCTCTATTTACTTGCAGATTAAGAACTACCATAAATCAAAATCCCCAAATTTACTCCCTTGGATCTAAAAGCATTAAAGAGCCCGTCTATTGCACCAGAT GAAATCAATTACTCTTGGCGTGGCCAGTCTTTTATTTCACACCTATGTTTATTCCTGCAAATTTATCTTAGGGTAGCTTGCCGAGACACTTTTCTTAAAT CTCTAGAGAGATCCCATTAGCATGATGTGCTATCTTCTTTAAGTTGTGTTGAATCTCGCATAGCAATCTTATTGTGTGTCATTTGTCTAAATAATTGTTT TTTATGGCAGTTGATTCTTGTCCAGTGAATCTATCTGATGATCTTGTTTTCTGTCTTTTGTTGTCTACATTAATCGATGACTGTGAAGTTGAATCATCTA AGCAGCTTTTAACTTGAAGGTTATATGTTTTCAGCTTTCTATGCTAGTTGCATAGCTGCAAATATGGTGGAGCAGCTTTGGAATTTTGCTTGGCCTTCTG CCATTGCCTTGATTCATCCAAGTCTTTTGCCTGTTGCTGTGATAGGTTTCTTCACTAAAGTGGCTATAATTATTGGAGCTCCCTTGATTGGCAAAGTTAT GGACCATGCTCCGAGACTGTATGGATATAATTGTTTGACTATCATTCAGGCCACTTCCCAGTTGCTATCTGCTGCAATGATTATTCATGCCTATTCGGTG CCTCCTACTTCAGTTTCAACCCTGCTTCTACGTCCATGGTTTGCCATATTGGTTTCAGCTGGATCTGTTGAGAGGCTATGTGGTGTAGCTTTGGGGGTTG CAAATGAGCGTGACTGGGTTGTATTGCTAGCAGGAGTGAATAGGCCAGTTGCACTTGCACAGGCAAATGCTTTTCTTAACCGGATTGATCTCTTGTCTGA GATAGTTGGGGCATCACTGTTTGGAGTTCTTCTTTCTAAATTTCATCCTGTAATCTGTTTGAAAGTTGCAGCTGGCTTAATAATGGGGTTACTGCCTGTT ACAATTCTTTTCATAAGGTTAGCGAACATGCTTTCTACTGGTGTTCTTGACCGGTCTATGCTTTCACAAACATGTTGCACAACATTCAGTGAAGATTCTG CACCAGATGCTGATAGTATAGTGGTTAAAGGTATGGAAGCCATCATGCTCGGCTGGAAGGAGTATCTGGGGCAGCCTGTTCTTCATGCTAGTCTTGCCTG GGTGCTCCTCTGCTTCAATGTTGTTCTTACTCCAGGCAGTTTGATGACCACATTCTTAACACAGCGCGGCTTAAGCCCATCTATCATTGGAGGATTCAAC GGAATGTGTGCTTTCATGGGTGTCGCAGCAACATTTGTGTCTTCAACACTGGTCAAACAATTTGGCATTTTAAAGGCCGGGGCTATTGGCTTGGTGTTTC AAGCTTTACTTCTCAGCATGGCTGTTGCTGTATATTGGAGTGGATCAATTTCTCGTCAGAGCCCGCTTCTTGTTTTCTTGTCAATGATTATATTATCACG GTTAGGACACATGTCCTATGACATTGTCGGGGCACAGATTATCCAAACCGGAATCCCATCATCGAAAGCAAATCTCATTGGGACAACAGAGGTTGCTGTC GCTAGTTTGGCAGAGTGTATAATGTTGGGGGTTGCAATAATTGCAAACGATCCTTCTCATTTTGGAGGTCTGGCAATGTTGTCTCTTATATCAGTGGTTG TTGCAGCATGGATGTTCTGTAGATGGTTGTTGAATCCAACAGATGAACAAAAAGTCCTCTTTTCTTATGATCCTCGGTTTTAATTTTCATGTAAGTGTAC TTTTGTATTAGCATTTCATTGTTTAATACCATATTTTCAATCTGGCTTTTGCCTTACTATATAAAATGTTCATAATTGCTTACATTATTTTGTTATCTCT CTTATGGTATGGGGGGTTTACATTTTTTTGGGCATGAATTTTCCGCACCACTTTTCTACGCACATACGGTATACCCGTTTACAAAAGACTTTTCCTTTGG AAACGACAATGGTTAGATGAGGAAAAGTGGTCAGATGCAAATATTCCTATCCTTTATCCTTTCTTAGTCCTACAGTGAGCATCGATATAATTATAAGGTT ATTTATCTTGTGACCTAGAGTTTATGGATTTAAATCCTTGAAATGATCTTTCTACTTGCAAGGGTAAAAAATTACGTAAATTTATCCTCCCATGATCCAT TAAGTGAGAATCTCGTACTATGAACCTTTCTTAGTCCGACATTTACTCATGTAAGGTGGAATAGTTTGTTTGGTCTCCTATATGAATTCTGTTGGTGCTT TGAATCTCCTAGTAGTGGTCAAACAATGTTTTATCTAACCAATATCTTATATTTGTGCAGTTGTTCCA BLAST |
Tissue | pods |
Gene name | LI_gene_188251; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_447966
Blastp | Solute carrier family 40 member 3, chloroplastic from Arabidopsis with 67.19% of identity |
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Blastx | Solute carrier family 40 member 3, chloroplastic from Arabidopsis with 67.19% of identity |
Eggnog | solute carrier family 40 (iron-regulated transporter), member 1(ENOG410XS3F) |
Kegg | Link to kegg annotations (AT5G26820) |
CantataDB | Link to cantataDB annotations (CNT0002180) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019428812.1) |
Pfam | Ferroportin1 (FPN1) (PF06963.11) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |