Ll_transcript_448304

• Id Trinity: TRINITY_DN51880_c1_g2_i16
• Name Transcript: Ll_transcript_448304
• Sequence: AATTCAGCCCTCAACTTTCAAAGCAAAAACAAACGTAACGAATTGTGAACACTTAAAACACTTTTTCTCTTCCGCAAAAAATCACACATCGCATTCCAAC TTGCGAACACAGTGAGGTGGAGTTTCAATAATGATGGAGAGAGCAGATTCTGTGCAGAAGCTGTACACACGCATGCGTCTATGGGAATTTCCGGATCAGT ATGTGATTGAACCAACTGATGGATCTTCCGGTTCTTCTTTGGCTGTTAGTCGAACCGATGGCTCCATGAAGCTCATTGATGAAGTTCCAGAGTGCAGCTC CCTTCGAGTTCCTAAGATTTATACGATTTTTGGTGTGATTGGGATTTTGAGGCTTTTGGCTGGATCATATTTACTGGTTATAACTGAGCGCGAGTGTGTT GGATCTTACTTGGGACATCCAATTTTCAAAATTTCCTCCATGAAGATTTTCCCATGTGATCATTCTCTTAAAAGTACCCCTGCTGAACAGAAAAAGACTG AGATGGAATTTTCCGGGCTGCTAAATGTTGCTGAGAAAACCTCTGGTCTATTCTTCTCATATGAAACTAATATAACACTGAGTGCCCAGCGATTGAATGA CCTGGGTGATGAGTCTAGATTGCTTCCTCTTTGGAGACAGGCAGAGCCTCGATTTCTTTGGAACAATTATATGTTAGAAGTGCTCATAGATAACAAGCTT GACCCATACTTACTCCCTGTAATCCAAGGCAGCTTTAATTACTTTCAAGCAGCCATTGGGAAAGATATTATTGACATCACTTTAATTGCTAGGAGATGCA CAAGAAGAAATGGAACTCGGATGTGGAGAAGAGGAGCTGATCCTGATGGCTATGTCGCCAATTTTGTCGAAACAGAGCAAATCATGCAGTTCAATGGGTA TACCGCATCACTTGTTCAGGTTCGTGGTTCAATTCCACTGCGCTGGCAGCAAATTGTTGACTTGACATATAAACCGAAGTTTGAGTTATTGAAACTTGAG GAAGCTCCTCGAGTCCTAGAGAGACATTTCTTAGACTTACGAAAAAAATATGGGGCAGTTCTGGCTGTTGACCTTGTTAACAAGCATGGAGGAGAAGGGC GGCTGTGTGAAAAGTTTGGCGACACAATGCAGCACGTGGCTGGTGATGATGTAAGATATGTGCACTTTGATTTTCATCAGGTCTGTGGGCACGTTCATTT TGAGCGTCTCTCAATCCTCTATGAACAAATTTCAGATTTCCTTGAGAGAAATGGATATCTTCTGTTGAATGAAAAGGGAGAGAAAATGAAGGAGCAACTT GGGGTTGTCAGGACCAATTGTATTGATTGTCTAGACCGTACAAATGTAACCCAGAGCATGATAGGCCGAAATATGTTGGAATGCCAGCTTAGAAGGCTTG GTGTCTTTGGTGCTGAAGAAACCATTAGCTCACATCCAAATCTAGATGACAGCTTTAAGATCTTGTGGGCTAATCATGGGGATGATGTAAGTATTCAGTA TTCAGGAACTCCTGCTCTAAAAGGAGACTTTGTCAGGTACTTTCCCATGAATATTTCCAAAGTTTTTACCATATATAAAGACGGTCTAGAACTTATGAAT CCACAAAAGGTTTTTCTTTGGAATTACGTTAGCATGTAATAATTTAAATAACCATTTGTAATGTCTTGTATTATGATGGCTTTAGTTGTATTTTCTAAAT CGGTAGTGTATGTCTCTTGGAAGTAGTATTAGGGTATGACTTTTACCTATTGTTCCATGGTTTTTCTTTTTACCATTGTGGTAATTTGGAAAATATCATG CGTTTTGTTCTTCCGTGTTAGTAGCCGGTTTCTCTTTTTACCAAGGGTAGTGTTTACTGTGGTGGCGGGATGATGTGGCAAAGACTGATATGAGAGGTTC ATCTTGAACACGGCTGAAGCCGGCCTTGGGCGGACCGGGTGATACCTGAAAAGGCTTAAAAGGGACTCCAACACTGAAATTAGTACAAGTATAATGCAGG GAGGGGATGAGGTAGAGAGAGTGAGTTAGAGAGAAGTTGTAATCTCGAAATGGTGCCCCTATTTATACCACACGGTTGGGATTTCTTCCCCCCGAAGGAA GGCATAATGTCGTCATGGTCCTGTCCAATCCAGCCTCAGTTTGGCAGGCCTGTTCCTGGGTCTACTGGCCCCTAGGTGCCCTCTAGGGGTGTCATCCTTT GTAAGCTATTCAGGTAAGCTTGTTAGACTGGTGTGCCAAACACTCGGACGAGGTGTTCTTGTTATGTTAGAACTCAATATTTTGTCTTGGGTTATTTCAG ATGTAGTTTCAAGTATGTTTCTGTTATGATTTAAAATTTAAACTTCGTGCCTTGCCTAATTAACTTTTTGGTGGGATTCAGATGTGGGCACCGCACAGTT CAAGGGATCCTAAAGGATGGTGTGAATGCCCTTCTACGCTATTATTACAATAATTTTAGTGATGGAACAAAGCAGGATGCAATTGATCTCTTGCAAGGAC ATTACATAGTTTCCGTCGGCCGTGACACAGCTGCCTCTTCTCAGAAAGGAGGCCTTGAAGCTATAGCTTCATTTCCTCTGGCTTTGGGTCTGGTTTTGAC TGGATTCTTTTTTGCAACCATGTCGTTGGGGCAAGGTGAGTTGACTTTTGTTTTAGTTTAAGGGATACAAAGTACACGTGAGGTCTAAACTAAGAATGAA ATTATCGATCATGCATAGACACAACATTTGCGTATGTTTAATATAAAAATCGAATCAACCCCCTACTATTAAAGGCCTCTGGTTTCAAACCTATAGCTCA CCCTTTTTATAAATGGAGGTTATAGCATTAGGCAGGGACAATAGGGATAAAAACTTAGGTTTTTCAATGGCTTTTAAGTTATAATATTCTGTTCATTATT CCAACAGTTCGATATGATTTTCGGCACTTCTTCCTTTCGCTTATGTGGGCAAGCATTAGTATCGGTATAGCGGCATTTGTGAGGGCCAACGGCCGAGTTT TCTGCAACCGACCTCGCCTGCACAAGCCCTGTTAGCTTCTATACTACTCGATTTGAGCAATTAAATTTCTCGAAGTATCAAGCTTCTGCAACAGGACTCA ACGGTAGAGACCATTGTTTTATCTCTAGACGGCTTTAAAGAGCTCAACGTTTACATAAGGCTTCTTGCTTGGTGTTTATTATATTTATTCTCTTCCTAAT TTTCTAGTCGATATAGCTTCTAGAAATTTATTCATGTCATAGTCCAGTCACGCCCCATTTGAGGGATTGCTGCTTTATTGGTGTTTTTTGCGCATCCTCT TCTCATTGATGGAACCATTGTCACGTAAGAAGCACTGAGGTTCTTGGAAAACATGTATTGATTTGATTATTTTGGATGCTTAATGTTTTTAAGCAAAATT CATGTAATAGCATTTATATTTCACATAAGACCATTGATTTGATTGTCACGTAAGACCATTGTAATAGCATTGATTGATATTTTACATTCCATTTCATCAA TATTATATATAGACCTTAAAGGTTTAACTGATTTGTA
• Tissue: pods
• Gene name: LI_gene_188262;
• Additional information: details;

Expression of Ll_transcript_448304

FPKM

• PAB: 0.2
• PNAB: 0
• PS1: 0.1
• PS2: 0.1
• PS3: 0.2
• PW1: 0.3
• PW2: 0.3
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_448304

• Blastp: Phosphoinositide phosphatase SAC7 from Arabidopsis with 77.61% of identity
• Blastx: Phosphoinositide phosphatase SAC7 from Arabidopsis with 77.61% of identity
• Eggnog: Phosphatase(COG5329)
• Kegg: Link to kegg annotations (AT3G51460)
• CantataDB: Link to cantataDB annotations (CNT0000925)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019424254.1)
• Pfam: SacI homology domain (PF02383.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;