Ll_transcript_448308

• Id Trinity: TRINITY_DN51880_c1_g2_i20
• Name Transcript: Ll_transcript_448308
• Sequence: CTCTGACAGACGTGTAATCACGGAATACGTGTCTGTAACTCACATTCCTCCGCCATCGTTTCCGCTTAACCAATCGAAGTGTTTCCGTTTGAATTTCATG CTTCACTTCATTGCCTTCTTCAACATACTCCTTTATCCCAATTCATTTCACCATTCTCCATTCTTCCACCTTCTACAAGTGTGTTAAGAATTAGGGTAAT GATGGAGAAGGCTGATTCAGTGAAGAAGCTATACACACAAATGCGACTTTGGGAATTTCCTGATCAATATGTGATTCAACCAACGGATGGATCTTCTTGT TCTTCATTGTCGATCAGTCGAAAAGATGGCTCCATGAAACTCATTGATGAGATTCCGGAATACAGGACCATTAGAATTCCTAAGATTTTCACAATTTTTG GTGTGGTTGGGATGATGAGGCTTTTGGCTGGGTCATATTTGATGGTTATAACTGGGCGGAAATGTGTTGGATCATATTTGGGGCATCCAATTTTTAAAAT TTCATCCATGAAGGTTTTTCCATGTGATCACTCTCTTAAACATACCCCTGCTGAACAAAAGAGGACAGAGATGGGATTTTCTGCACTTTTAAATGTAGCT GAGAGGACTTCTGGTCTGTTCTTCTCGTATGACACTAATTTAACTCTGAGTGCTCAACGACTGAATGACCTGGGCGACGAGTCTAGATCGCTTCCTCTTT GGAGACAGGCAGAGCCTCGATTTCTTTGGAACAATTATATGTTGGAAGTAATCATAGATAACAAGCTTGACCCATACTTGCTCCCTATTGTTCAAGGAAG CTTTCATTACTTTCAAGCAGCCATTGGAAAAGATATTATCGACATCACTTTGATTGCTAGGAGATGCACAAGAAGAAATGGTATTTAATACTTTTGAATT GATTCTGTATATTTACAGATAGACAGTACAGTTATAAATATCATAAGTAATAGTATATTCTTACAATTTAGAGAATCAATATCCTTTAGGCCATGAAATT AACTTGAGGAAAAATGTCATTTCCTTAGCATTCTAACTTCATGTTTTCAACAAAACTCCATCAAGTACCTCAAGCAAGGAAAAGTTACATACAATCAGAA TTAGTCAATGTCTCCAAAATCCATAAGATACATAACCAAGACGTACTCTAATGTTTCCCTAAAAAAGATACATACCCTAATGTTTTAATAGAAATAAACA AAAAACAAAACAAAAAAGTATATCTGGAACATAGCCATGTGCTCTCTGTCCCAATGTGTACCTAGTACAAATATGGCAGCCAAGTACAAATGACTTTTTG TTGGGTACATTCATCTGTTTTTGGTACACAATTGTGCAAGCAATTGGCATCACAATTTTGGGTCAGGATGACAATTAGGTAAAACCCTCTCTAAAGTGGC AACTCCAGGATTTGAACCCCTAAAATTGTTGATAAGTTTCACCCAGGGATGAAATAAATTTGCCTGATATTCTTCATGTTTAGAATGAGACAATAAAAAA GATTGTTAATTACAAGTATTTCGGAGGAGAAACAAAAACACAGTTGATTCTAGTTGCAATTGGCTTCTGTATCTATTACTTTCCCTTTAATGAGGAAAAT TGGAGAGCTAATGTTATCTCGGAATTTGAAATTTTTTTGTGAGGAGAAAACTTGTGGTTATCATTTTGGGATGCTTAGTGAAGGCTGTGTGGCTGGCCCG TGAGCCATGAGCTACCATATTAAGGATTAAGGGCTACCTGGTTGCATAAAATAATTTCAACTACTTGCGTTGGAATGGCATCATCTTTTGCTGGTTGGTT GGCTAATGCTTCAAATACAATTTCATTTCCTGGAAGGAACTCGAATGTGGAGAAGAGGAGCTGACCCTGATGGGTATGTCGCCAATTTTGTGGAAACGGA GCAAATTATGCAGATCAATGGGTATACAGCATCCTTTGTTCAGGTTCGTGGTTCAATTCCACTGCTTTGGGAGCAAATTGTTGACTTGACATATAAACCG AAGTTTGAGTTATTGAAACTTGAAGAAGCTCCTCGAGTCCTAGAACGCCATTTCTTAGATTTAAGAAAAAAATATGGGGCTGTGGTAGCTGTTGATCTCG TCAACAAGCATGGAGGAGAAGGGCGACTATGTGAAAAATTTGGAAGTACAATGCAGCAAGTGGCTAGTGATGATGTAAGATATATACACTTTGATTTCCA TCACATCTGCGGGCACGTTCATTTTGAGAATCTCGCAATCCTTTATGATCAAATTTCAGATTTTCTTGAGACAAATGGGGTTGAACTAATTCCTATGACT TATAATACTCTTCTGTTATTGTGCATACTGTGAAACTATCTGATATCTTCTGTTAGATGAAAAGGGAGAGAAAATGAAGGAGCAACTTGGGGTTGTTAGG ACCAATTGTATTGATTGTCTGGACCGTACAAATGTTACTCAGAGCATGATAGGCCGAAATATGCTAGAATACCAGCTTAGAAGACTAGGTGTCTTTGGTG CTGAAGAAACCATTAGTTCACATCCAAACCTGGACGACAGCTTCAAGATCTTGTGGGCTAATCATGGGGATGATATAAGTGTTCAGTACTCAGGCACTCC TGCTCTGAAAGGAGATTTTGTTCGATACGGACACCGCACTATAGAAGGGATACTAGCAGATGGTTGGAATGCTCTTATGCGCTATTATTTGAATAATTTT TGTGATGGAACAAAGCAGGATACAATTGATCTCCTGCAAGGACATTATATAGTTTCTGTTGGCCGAGATATGACTCCCTCTTCTCAGAATGGAGGTCTTG AAGCTATCGCTTCATTTCCTCTGGCTTTGGGTCTGGTTTTGATAGGATTCCTTTTTGCAACAATGTCATTGAGGCAAGTTAGATATGATTTTCGGCACTT CTTCTTTTCGCTAATGTGGGCAAGCATTAGTGTTGGAATAGCAGCATTTGTGAGGGTCAACGGTCGGGTTTTCTGCAACAGGCCTCGTTTAAACAAACCC AGGTGTTAACTTTTATATACATACCACTTTCAGCAATTAACATTCCCCCCGGAAGTGCCGCGCTTCTGCAACAGGCCACACTAGCAGAAATCCTCTGCAT CTAGATCACTTTAATGAATTCAATCCTTTACACAAGGCTCCTAGCATGCTGCTTATTACATTCTATTCATTCATACTGATTTTCTAATCATTATAGCTTC CAAAAAATTCATTCATACCCCATCTCTGTGCCTTGTTTAAGATAGAAGCACTCAAGGTTCTTGGAAATCAGATTTTGAGTTCATTCTTTAACAGAATTCA TGTTTCATGCACTAGAACCCTTGCAGGTCTTTATTTCAGTGAAGGTTATTGCAATCAAGATGAGTTTACTTTAGTTAACATTTTATGTTACATTTGGTTA GGGTCATTGACTTATTATGTAACTGAGAAAAGGTTACTGGCTTACTGCATGCAAAATTCATCAAATTTTGGCAATCTAATCTCTTAAATTAAGGGAATCC ATATTATCCTTTTCGAAAATTGTTGTTTTATTTGAGCTAGAAATCAGG
• Tissue: pods
• Gene name: LI_gene_188262;
• Additional information: details;

Expression of Ll_transcript_448308

FPKM

• PAB: 0.8
• PNAB: 0.2
• PS1: 0.3
• PS2: 0.2
• PS3: 0.6
• PW1: 0
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_448308

• Blastp: Phosphoinositide phosphatase SAC7 from Arabidopsis with 69.16% of identity
• Blastx: Phosphoinositide phosphatase SAC6 from Arabidopsis with 74.09% of identity
• Eggnog: Phosphatase(COG5329)
• Kegg: Link to kegg annotations (AT3G51460)
• CantataDB: Link to cantataDB annotations (CNT0000925)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_015954386.1)
• Pfam: SacI homology domain (PF02383.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;