Ll_transcript_448310

• Id Trinity: TRINITY_DN51880_c1_g2_i22
• Name Transcript: Ll_transcript_448310
• Sequence: CTCTGACAGACGTGTAATCACGGAATACGTGTCTGTAACTCACATTCCTCCGCCATCGTTTCCGCTTAACCAATCGAAGTGTTTCCGTTTGAATTTCATG CTTCACTTCATTGCCTTCTTCAACATACTCCTTTATCCCAATTCATTTCACCATTCTCCATTCTTCCACCTTCTACAAGTGTGTTAAGAATTAGGGTAAT GATGGAGAAGGCTGATTCAGTGAAGAAGCTATACACACAAATGCGACTTTGGGAATTTCCTGATCAATATGTGATTCAACCAACGGATGGATCTTCTTGT TCTTCATTGTCGATCAGTCGAAAAGATGGCTCCATGAAACTCATTGATGAGATTCCGGAATACAGGACCATTAGAATTCCTAAGATTTTCACAATTTTTG GTGTGGTTGGGATGATGAGGCTTTTGGCTGGGTCATATTTGATGGTTATAACTGGGCGGAAATGTGTTGGATCATATTTGGGGCATCCAATTTTTAAAAT TTCATCCATGAAGGTTTTTCCATGTGATCACTCTCTTAAACATACCCCTGCTGAACAAAAGAGGACAGAGATGGGATTTTCTGCACTTTTAAATGTAGCT GAGAGGACTTCTGGTCTGTTCTTCTCGTATGACACTAATTTAACTCTGAGTGCTCAACGACTGAATGACCTGGGCGACGAGTCTAGATCGCTTCCTCTTT GGAGACAGGCAGAGCCTCGATTTCTTTGGAACAATTATATGTTGGAAGTAATCATAGATAACAAGCTTGACCCATACTTGCTCCCTATTGTTCAAGGAAG TATCATTTTCTTATTGTTGCTTTCATTACTTTCAAGCAGCCATTGGAAAAGATATTATCGACATCACTTTGATTGCTAGGAGATGCACAAGAAGAAATGG TATTTAATACTTTTGAATTGATTCTGTATATTTACAGATAGACAGTACAGTTATAAATATCATAAGTAATAGTATATTCTTACAATTTAGAGAATCAATA TCCTTTAGGCCATGAAATTAACTTGAGGAAAAATGTCATTTCCTTAGCATTCTAACTTCATGTTTTCAACAAAACTCCATCAAGTACCTCAAGCAAGGAA AAGTTACATACAATCAGAATTAGTCAATGTCTCCAAAATCCATAAGATACATAACCAAGACGTACTCTAATGTTTCCCTAAAAAAGATACATACCCTAAT GTTTTAATAGAAATAAACAAAAAACAAAACAAAAAAGTATATCTGGAACATAGCCATGTGCTCTCTGTCCCAATGTGTACCTAGTACAAATATGGCAGCC AAGTACAAATGACTTTTTGTTGGGTACATTCATCTGTTTTTGGTACACAATTGTGCAAGCAATTGGCATCACAATTTTGGGTCAGGATGACAATTAGGTA AAACCCTCTCTAAAGTGGCAACTCCAGGATTTGAACCCCTAAAATTGTTGATAAGTTTCACCCAGGGATGAAATAAATTTGCCTGATATTCTTCATGTTT AGAATGAGACAATAAAAAAGATTGTTAATTACAAGTATTTCGGAGGAGAAACAAAAACACAGTTGATTCTAGTTGCAATTGGCTTCTGTATCTATTACTT TCCCTTTAATGAGGAAAATTGGAGAGCTAATGTTATCTCGGAATTTGAAATTTTTTTGTGAGGAGAAAACTTGTGGTTATCATTTTGGGATGCTTAGTGA AGGCTGTGTGGCTGGCCCGTGAGCCATGAGCTACCATATTAAGGATTAAGGGCTACCTGGTTGCATAAAATAATTTCAACTACTTGCGTTGGAATGGCAT CATCTTTTGCTGGTTGGTTGGCTAATGCTTCAAATACAATTTCATTTCCTGGAAGGAACTCGAATGTGGAGAAGAGGAGCTGACCCTGATGGGTATGTCG CCAATTTTGTGGAAACGGAGCAAATTATGCAGATCAATGGGTATACAGCATCCTTTGTTCAGGTTCGTGGTTCAATTCCACTGCTTTGGGAGCAAATTGT TGACTTGACATATAAACCGAAGTTTGAGTTATTGAAACTTGAAGAAGCTCCTCGAGTCCTAGAACGCCATTTCTTAGATTTAAGAAAAAAATATGGGGCT GTGGTAGCTGTTGATCTCGTCAACAAGCATGGAGGAGAAGGGCGACTATGTGAAAAATTTGGAAGTACAATGCAGCAAGTGGCTAGTGATGATGTAAGAT ATATACACTTTGATTTCCATCACATCTGCGGGCACGTTCATTTTGAGAATCTCGCAATCCTTTATGATCAAATTTCAGATTTTCTTGAGACAAATGGATA TCTTCTGTTAGATGAAAAGGGAGAGAAAATGAAGGAGCAACTTGGGGTTGTTAGGACCAATTGTATTGATTGTCTGGACCGTACAAATGTTACTCAGAGC ATGATAGGCCGAAATATGCTAGAATACCAGCTTAGAAGACTAGGTGTCTTTGGTGCTGAAGAAACCATTAGTTCACATCCAAACCTGGACGACAGCTTCA AGATCTTGTGGGCTAATCATGGGGATGATATAAGTGTTCAGTACTCAGGCACTCCTGCTCTGAAAGGAGATTTTGTTCGATACGGACACCGCACTATAGA AGGGATACTAGCAGATGGTTGGAATGCTCTTATGCGCTATTATTTGAATAATTTTTGTGATGGAACAAAGCAGGATACAATTGATCTCCTGCAAGGACAT TATATAGTTTCTGTTGGCCGAGATATGACTCCCTCTTCTCAGAATGGAGGTCTTGAAGCTATCGCTTCATTTCCTCTGGCTTTGGGTCTGGTTTTGATAG GATTCCTTTTTGCAACAATGTCATTGAGGCAAGTTAGATATGATTTTCGGCACTTCTTCTTTTCGCTAATGTGGGCAAGCATTAGTGTTGGAATAGCAGC ATTTGTGAGGGTCAACGGTCGGGTTTTCTGCAACAGGCCTCGTTTAAACAAACCCAGGTGTTAACTTTTATATACATACCACTTTCAGCAATTAACATTC CCCCCGGAAGTGCCGCGCTTCTGCAACAGGCCACACTAGCAGAAATCCTCTGCATCTAGATCACTTTAATGAATTCAATCCTTTACACAAGGCTCCTAGC ATGCTGCTTATTACATTCTATTCATTCATACTGATTTTCTAATCATTATAGCTTCCAAAAAATTCATTCATACCCCATCTCTGTGCCTTGTTTAAGATAG AAGCACTCAAGGTTCTTGGAAATCAGATTTTGAGTTCATTCTTTAACAGAATTCATGTTTCATGCACTAGAACCCTTGCAGGTCTTTATTTCAGTGAAGG TTATTGCAATCAAGATGAGTTTACTTTAGTTAACATTTTATGTTACATTTGGTTAGGGTCATTGACTTATTATGTAACTGAGAAAAGGTTACTGGCTTAC TGCATGCAAAATTCATCAAATTTTGGCAATCTAATCTCTTAAATTAAGGGAATCCATATTATCCTTTTCGAAAATTGTTGTTTTATTTGAGCTAGAAATC AGG
• Tissue: pods
• Gene name: LI_gene_188262;
• Additional information: details;

Expression of Ll_transcript_448310

FPKM

• PAB: 0
• PNAB: 0
• PS1: 0.3
• PS2: 0.1
• PS3: 0.1
• PW1: 0
• PW2: 0
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_448310

• Blastp: Phosphoinositide phosphatase SAC6 from Arabidopsis with 75.54% of identity
• Blastx: Phosphoinositide phosphatase SAC6 from Arabidopsis with 75.54% of identity
• Eggnog: Phosphatase(COG5329)
• Kegg: Link to kegg annotations (AT5G66020)
• CantataDB: Link to cantataDB annotations (CNT0000925)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019421966.1)
• Pfam: SacI homology domain (PF02383.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;