Ll_transcript_448284

• Id Trinity: TRINITY_DN51880_c1_g2_i3
• Name Transcript: Ll_transcript_448284
• Sequence: CTCTGACAGACGTGTAATCACGGAATACGTGTCTGTAACTCACATTCCTCCGCCATCGTTTCCGCTTAACCAATCGAAGTGTTTCCGTTTGAATTTCATG CTTCACTTCATTGCCTTCTTCAACATACTCCTTTATCCCAATTCATTTCACCATTCTCCATTCTTCCACCTTCTACAAGTGTGTTAAGAATTAGGGTAAT GATGGAGAAGGCTGATTCAGTGAAGAAGCTATACACACAAATGCGACTTTGGGAATTTCCTGATCAATATGTGATTCAACCAACGGATGGATCTTCTTGT TCTTCATTGTCGATCAGTCGAAAAGATGGCTCCATGAAACTCATTGATGAGATTCCGGAATACAGGACCATTAGAATTCCTAAGATTTTCACAATTTTTG GTGTGGTTGGGATGATGAGGCTTTTGGCTGGGTCATATTTGATGGTTATAACTGGGCGGAAATGTGTTGGATCATATTTGGGGCATCCAATTTTTAAAAT TTCATCCATGAAGGTTTTTCCATGTGATCACTCTCTTAAACATACCCCTGCTGAACAAAAGAGGACAGAGATGGGATTTTCTGCACTTTTAAATGTAGCT GAGAGGACTTCTGGTCTGTTCTTCTCGTATGACACTAATTTAACTCTGAGTGCTCAACGACTGAATGACCTGGGCGACGAGTCTAGATCGCTTCCTCTTT GGAGACAGGCAGAGCCTCGATTTCTTTGGAACAATTATATGTTGGAAGTAATCATAGATAACAAGCTTGACCCATACTTGCTCCCTATTGTTCAAGGAAG TATCATTTTCTTATTGTTGTATTCATTTTATGGTTGTTTTCTAAGACATGCATTGTTTTTCGGTTTGTTTAATCTGACCGTTTTCATTGTTATCTCGCAA TGACGTAACTATTTCCTTTTAAGATTATCCTTAACAATGCATCAGGCTTTCATTACTTTCAAGCAGCCATTGGAAAAGATATTATCGACATCACTTTGAT TGCTAGGAGATGCACAAGAAGAAATGGTATTTAATACTTTTGAATTGATTCTGTATATTTACAGATAGACAGTACAGTTATAAATATCATAAGTAATAGT ATATTCTTACAATTTAGAGAATCAATATCCTTTAGGCCATGAAATTAACTTGAGGAAAAATGTCATTTCCTTAGCATTCTAACTTCATGTTTTCAACAAA ACTCCATCAAGTACCTCAAGCAAGGAAAAGTTACATACAATCAGAATTAGTCAATGTCTCCAAAATCCATAAGATACATAACCAAGACGTACTCTAATGT TTCCCTAAAAAAGATACATACCCTAATGTTTTAATAGAAATAAACAAAAAACAAAACAAAAAAGTATATCTGGAACATAGCCATGTGCTCTCTGTCCCAA TGTGTACCTAGTACAAATATGGCAGCCAAGTACAAATGACTTTTTGTTGGGTACATTCATCTGTTTTTGGTACACAATTGTGCAAGCAATTGGCATCACA ATTTTGGGTCAGGATGACAATTAGGTAAAACCCTCTCTAAAGTGGCAACTCCAGGATTTGAACCCCTAAAATTGTTGATAAGTTTCACCCAGGGATGAAA TAAATTTGCCTGATATTCTTCATGTTTAGAATGAGACAATAAAAAAGATTGTTAATTACAAGTATTTCGGAGGAGAAACAAAAACACAGTTGATTCTAGT TGCAATTGGCTTCTGTATCTATTACTTTCCCTTTAATGAGGAAAATTGGAGAGCTAATGTTATCTCGGAATTTGAAATTTTTTTGTGAGGAGAAAACTTG TGGTTATCATTTTGGGATGCTTAGTGAAGGCTGTGTGGCTGGCCCGTGAGCCATGAGCTACCATATTAAGGATTAAGGGCTACCTGGTTGCATAAAATAA TTTCAACTACTTGCGTTGGAATGGCATCATCTTTTGCTGGTTGGTTGGCTAATGCTTCAAATACAATTTCATTTCCTGGAAGGAACTCGAATGTGGAGAA GAGGAGCTGACCCTGATGGGTATGTCGCCAATTTTGTGGAAACGGAGCAAATTATGCAGATCAATGGGTATACAGCATCCTTTGTTCAGGTTCGTGGTTC AATTCCACTGCTTTGGGAGCAAATTGTTGACTTGACATATAAACCGAAGTTTGAGTTATTGAAACTTGAAGAAGCTCCTCGAGTCCTAGAACGCCATTTC TTAGATTTAAGAAAAAAATATGGGGCTGTGGTAGCTGTTGATCTCGTCAACAAGCATGGAGGAGAAGGGCGACTATGTGAAAAATTTGGAAGTACAATGC AGCAAGTGGCTAGTGATGATGTAAGATATATACACTTTGATTTCCATCACATCTGCGGGCACGTTCATTTTGAGAATCTCGCAATCCTTTATGATCAAAT TTCAGATTTTCTTGAGACAAATGGGGTTGAACTAATTCCTATGACTTATAATACTCTTCTGTTATTGTGCATACTGTGAAACTATCTGATATCTTCTGTT AGATGAAAAGGGAGAGAAAATGAAGGAGCAACTTGGGGTTGTTAGGACCAATTGTATTGATTGTCTGGACCGTACAAATGTTACTCAGAGCATGATAGGC CGAAATATGCTAGAATACCAGCTTAGAAGACTAGGTGTCTTTGGTGCTGAAGAAACCATTAGTTCACATCCAAACCTGGACGACAGCTTCAAGATCTTGT GGGCTAATCATGGGGATGATATAAGTGTTCAGTACTCAGGCACTCCTGCTCTGAAAGGAGATTTTGTTCGATACGGACACCGCACTATAGAAGGGATACT AGCAGATGGTTGGAATGCTCTTATGCGCTATTATTTGAATAATTTTTGTGATGGAACAAAGCAGGATACAATTGATCTCCTGCAAGGACATTATATAGTT TCTGTTGGCCGAGATATGACTCCCTCTTCTCAGAATGGAGGTCTTGAAGCTATCGCTTCATTTCCTCTGGCTTTGGGTCTGGTTTTGATAGGATTCCTTT TTGCAACAATGTCATTGAGGCAAGTTAGATATGATTTTCGGCACTTCTTCTTTTCGCTAATGTGGGCAAGCATTAGTGTTGGAATAGCAGCATTTGTGAG GGTCAACGGTCGGGTTTTCTGCAACAGGCCTCGTTTAAACAAACCCAGGTGTTAACTTTTATATACATACCACTTTCAGCAATTAACATTCCCCCCGGAA GTGCCGCGCTTCTGCAACAGGCCACACTAGCAGAAATCCTCTGCATCTAGATCACTTTAATGAATTCAATCCTTTACACAAGGCTCCTAGCATGCTGCTT ATTACATTCTATTCATTCATACTGATTTTCTAATCATTATAGCTTCCAAAAAATTCATTCATACCCCATCTCTGTGCCTTGTTTAAGATAGAAGCACTCA AGGTTCTTGGAAATCAGATTTTGAGTTCATTCTTTAACAGAATTCATGTTTCATGCACTAGAACCCTTGCAGGTCTTTATTTCAGTGAAGGTTATTGCAA TCAAGATGAGTTTACTTTAGTTAACATTTTATGTTACATTTGGTTAGGGTCATTGACTTATTATGTAACTGAGAAAAGGTTACTGGCTTACTGCATGCAA AATTCATCAAATTTTGGCAATCTAATCTCTTAAATTAAGGGAATCCATATTATCCTTTTCGAAAATTGTTGTTTTATTTGAGCTAGAAATCAGG
• Tissue: pods
• Gene name: LI_gene_188262;
• Additional information: details;

Expression of Ll_transcript_448284

FPKM

• PAB: 0.3
• PNAB: 0
• PS1: 0
• PS2: 0.2
• PS3: 0
• PW1: 0.2
• PW2: 0.1
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_448284

• Blastp: Phosphoinositide phosphatase SAC7 from Arabidopsis with 68% of identity
• Blastx: Phosphoinositide phosphatase SAC6 from Arabidopsis with 74.09% of identity
• Eggnog: Phosphatase(COG5329)
• Kegg: Link to kegg annotations (AT3G51460)
• CantataDB: Link to cantataDB annotations (CNT0000925)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_015954386.1)
• Pfam: SacI homology domain (PF02383.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;