Id Trinity | TRINITY_DN51880_c1_g2_i5 |
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Name Transcript | Ll_transcript_448287 |
Sequence | AATTCAGCCCTCAACTTTCAAAGCAAAAACAAACGTAACGAATTGTGAACACTTAAAACACTTTTTCTCTTCCGCAAAAAATCACACATCGCATTCCAAC TTGCGAACACAGTGAGGTGGAGTTTCAATAATGATGGAGAGAGCAGATTCTGTGCAGAAGCTGTACACACGCATGCGTCTATGGGAATTTCCGGATCAGT ATGTGATTGAACCAACTGATGGATCTTCCGGTTCTTCTTTGGCTGTTAGTCGAACCGATGGCTCCATGAAGCTCATTGATGAAGTTCCAGAGTGCAGCTC CCTTCGAGTTCCTAAGATTTATACGATTTTTGGTGTGATTGGGATTTTGAGGCTTTTGGCTGGATCATATTTACTGGTTATAACTGAGCGCGAGTGTGTT GGATCTTACTTGGGACATCCAATTTTCAAAATTTCCTCCATGAAGATTTTCCCATGTGATCATTCTCTTAAAAGTACCCCTGCTGAACAGAAAAAGACTG AGATGGAATTTTCCGGGCTGCTAAATGTTGCTGAGAAAACCTCTGGTCTATTCTTCTCATATGAAACTAATATAACACTGAGTGCCCAGCGATTGAATGA CCTGGGTGATGAGTCTAGATTGCTTCCTCTTTGGAGACAGGCAGAGCCTCGATTTCTTTGGAACAATTATATGTTAGAAGTGCTCATAGATAACAAGCTT GACCCATACTTACTCCCTGTAATCCAAGGCAGCTTTAATTACTTTCAAGCAGCCATTGGGAAAGATATTATTGACATCACTTTAATTGCTAGGAGATGCA CAAGAAGAAATGGAACTCGGATGTGGAGAAGAGGAGCTGATCCTGATGGCTATGTCGCCAATTTTGTCGAAACAGAGCAAATCATGCAGTTCAATGGGTA TACCGCATCACTTGTTCAGGTTCGTGGTTCAATTCCACTGCGCTGGCAGCAAATTGTTGACTTGACATATAAACCGAAGTTTGAGTTATTGAAACTTGAG GAAGCTCCTCGAGTCCTAGAGAGACATTTCTTAGACTTACGAAAAAAATATGGGGCAGTTCTGGCTGTTGACCTTGTTAACAAGCATGGAGGAGAAGGGC GGCTGTGTGAAAAGTTTGGCGACACAATGCAGCACGTGGCTGGTGATGATGTAAGATATGTGCACTTTGATTTTCATCAGGTCTGTGGGCACGTTCATTT TGAGCGTCTCTCAATCCTCTATGAACAAATTTCAGATTTCCTTGAGAGAAATGGATATCTTCTGTTGAATGAAAAGGGAGAGAAAATGAAGGAGCAACTT GGGGTTGTCAGGACCAATTGTATTGATTGTCTAGACCGTACAAATGTAACCCAGAGCATGATAGGCCGAAATATGTTGGAATGCCAGCTTAGAAGGCTTG GTGTCTTTGGTGCTGAAGAAACCATTAGCTCACATCCAAATCTAGATGACAGCTTTAAGATCTTGTGGGCTAATCATGGGGATGATGTAAGTATTCAGTA TTCAGGAACTCCTGCTCTAAAAGGAGACTTTGTCAGGTACTTTCCCATGAATATTTCCAAAGTTTTTACCATATATAAAGACGGTCTAGAACTTATGAAT CCACAAAAGGTTTTTCTTTGGAATTACGTTAGCATGTAATAATTTAAATAACCATTTGTAATGTCTTGTATTATGATGGCTTTAGTTGTATTTTCTAAAT CGGTAGTGTATGTCTCTTGGAAGTAGTATTAGGGTATGACTTTTACCTATTGTTCCATGGTTTTTCTTTTTACCATTGTGGTAATTTGGAAAATATCATG CGTTTTGTTCTTCCGTGTTAGTAGCCGGTTTCTCTTTTTACCAAGGGTAGTGTTTACTGTGGTGGCGGGATGATGTGGCAAAGACTGATATGAGAGGTTC ATCTTGAACACGGCTGAAGCCGGCCTTGGGCGGACCGGGTGATACCTGAAAAGGCTTAAAAGGGACTCCAACACTGAAATTAGTACAAGTATAATGCAGG GAGGGGATGAGGTAGAGAGAGTGAGTTAGAGAGAAGTTGTAATCTCGAAATGGTGCCCCTATTTATACCACACGGTTGGGATTTCTTCCCCCCGAAGGAA GGCATAATGTCGTCATGGTCCTGTCCAATCCAGCCTCAGTTTGGCAGGCCTGTTCCTGGGTCTACTGGCCCCTAGGTGCCCTCTAGGGGTGTCATCCTTT GTAAGCTATTCAGGTAAGCTTGTTAGACTGGTGTGCCAAACACTCGGACGAGGTGTTCTTGTTATGTTAGAACTCAATATTTTGTCTTGGGTTATTTCAG ATGTAGTTTCAAGTATGTTTCTGTTATGATTTAAAATTTAAACTTCGTGCCTTGCCTAATTAACTTTTTGGTGGGATTCAGATGTGGGCACCGCACAGTT CAAGGGATCCTAAAGGATGGTGTGAATGCCCTTCTACGCTATTATTACAATAATTTTAGTGATGGAACAAAGCAGGTTTGTAGATCTCATTTCTCATACG TGTGGGTGCTGTAGCTGTGGTGTAGAATTCCTTAGTACTGATTGGTCATAATTCATCATTATCTAGGCCAGGTCGTTTTTTAAGTTTGAACTGCAACTGC TCCATATGGCAATTATGATTTAGGAGATGATGCTCTGTGCATGCATATCTCACTGTCAATCATAATCAGGATTATGTCCTTTACCCCACCTGAAAACATT TCTGAATCTGACATCTTTTCTAAGTTTGTTAATTAAAAAAACTATTAGTTTATTTGGAATTCATTTATGCTGTTGATGATTTTTTTTTTATTACATGAAG GATGCAATTGATCTCTTGCAAGGACATTACATAGTTTCCGTCGGCCGTGACACAGCTGCCTCTTCTCAGAAAGGAGGCCTTGAAGCTATAGCTTCATTTC CTCTGGCTTTGGGTCTGGTTTTGACTGGATTCTTTTTTGCAACCATGTCGTTGGGGCAAGTTCGATATGATTTTCGGCACTTCTTCCTTTCGCTTATGTG GGCAAGCATTAGTATCGGTATAGCGGCATTTGTGAGGGCCAACGGCCGAGTTTTCTGCAACCGACCTCGCCTGCACAAGCCCTGTTAGCTTCTATACTAC TCGATTTGAGCAATTAAATTTCTCGAAGTATCAAGCTTCTGCAACAGGACTCAACGGTAGAGACCATTGTTTTATCTCTAGACGGCTTTAAAGAGCTCAA CGTTTACATAAGGCTTCTTGCTTGGTGTTTATTATATTTATTCTCTTCCTAATTTTCTAGTCGATATAGCTTCTAGAAATTTATTCATGTCATAGTCCAG TCACGCCCCATTTGAGGGATTGCTGCTTTATTGGTGTTTTTTGCGCATCCTCTTCTCATTGATGGAACCATTGTCACGTAAGAAGCACTGAGGTTCTTGG AAAACATGTATTGATTTGATTATTTTGGATGCTTAATGTTTTTAAGCAAAATTCATGTAATAGCATTTATATTTCACATAAGACCATTGATTTGATTGTC ACGTAAGACCATTGTAATAGCATTGATTGATATTTTACATTCCATTTCATCAATATTATATATAGACCTTAAAGGTTTAACTGATTTGTA BLAST |
Tissue | pods |
Gene name | LI_gene_188262; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_448287
Blastp | Phosphoinositide phosphatase SAC7 from Arabidopsis with 77.61% of identity |
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Blastx | Phosphoinositide phosphatase SAC7 from Arabidopsis with 77.61% of identity |
Eggnog | Phosphatase(COG5329) |
Kegg | Link to kegg annotations (AT3G51460) |
CantataDB | Link to cantataDB annotations (CNT0000925) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019424254.1) |
Pfam | SacI homology domain (PF02383.17) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |