Ll_transcript_447002

• Id Trinity: TRINITY_DN51882_c0_g3_i2
• Name Transcript: Ll_transcript_447002
• Sequence: CATATATGTTCTCCTAAAAAGCATAAAAAATTTCGATTACCCTCTTCTCTTTCTTCCTTTCCATACATTTTCTTCTTCACTTTTCACTTCCATGCCAATA ATCTTAGCTGCTATGTGAGAAAAAAAGAAACCTTATTTTTGTGTTTTCTTCTCTTCTTCTGTTTGGATCTCTGAGCAACGGTAAAAGAATCACCACCATG TCAACGCCTAGTTCAACTTCACCTCTGAAATCTTCCGGCACCGTCTCCGACCAATTCCCGGCGGGTCTCCGGGTACTTGTGGTGGATGATGACCCCACTT GCCTTATGATTCTTGATAGGATGCTTCGTGCTTGCTTCTATGAAGTGACCAAATGCAAAAGAGCAGAGATCGCATTGTCTCTTCTGAGAGAGAACAAAAA TGGGTTTGATATTGTTCTAAGCGACGTGCATATGCCGGATATGGATGGTTTTAAACTTCTAGAGCATATTGGATTGGAGATGGACCTTCCGGTTATTATG ATGTCAGCAGATGATGGAAAGCAAGTTGTAATGAAGGGTGTGACACATGGTGCTTGCGATTATCTAATTAAACCTGTTCGTATTGAGGCATTGAAGAATA TATGGCAGCATGTGGTTCGGAGAAGAAAGAACGAGTGGAAAGATCTGGAGCAGTCGGGTAGTGTAGACGAAGTAGATCGACAGCTAAAGGGATCTGATGA TGCAGATTATTCATCATCCGCAAATGAAGGGAAATCCTCAAAGAAGAGAAGGGACGAGGAAGAAGATCCAGATGAGAGGGATGATTCTTCAACGTTAAAG AAGCCACGCGTCGTTTGGTCTGTTGAACTCCATCAGCAGTTTATGGCTGCTGTCAATCAACTGGGTCTCGATAAGGCTGTTCCTAAAAAAATTCTGGAAT TGATGAATGTTCCTGGGCTAACTAGAGAAAATGTTGCTAGCCACCTCCAGAAATACCGTTTATATCTTAGAAGGCTTAGCGGAGTATCACCGATGCAGAA TAACTTGAACAACCCTTTCATCAGCCCCCAGGCGGCATCGTTTGGGGCAACTTCAATCAGTGGAATTGATCTTGAAACACTTCAAGCTTCTGGACACCTC CCAGCACAAAGTCTAGCTAAGCTTCAAGCAGCAGGGCTTGGCAGGCCAACTACAAATGCAGGCACATCTATACCTCTAGTGGAACAAAGGAACCTTTTCA GTTTTGAGAACCCAGGAATAAGATTTGGAGAAAGCCAACTGCAACATTTGAGCAATAGTAAACCAACGAACTTACTTCACGGAATCCCTACCAACATGGA GCCAAAACAGCTTGCCAATTTGCACCAACCTACCCAGTCCCTTGGCAACTTGAACATGGGAATAAATTCTTCTGCTGCACAGAGCAACCCCTTGTTGATG CATATGGCTCAATCCCAATCAAGAGGTCAGGTGCTAGGTGAAAATACTTGTTCTCATGTTAATAGGCTTTCATCATCTTTGGTGCAGCCTACATTACGAA ATGGAATTTCTAATGGTGTTTTAGGAAACGGGATTGCTGGTATGAGCAACATAACTCCTGCTTATAATGCAGTTCAACAAAACTCTTCAATGTTGAGTTT TCCTATGAACCAATCGGCTGAAATGTCTGTCAGTACTTTTCCTCTCAGAAGCACTCCACGGATATCCAATATGGCAACAGAAGGCATGTTTCATGAGGAA GTTTCCATAGGAATTAAGGGATCAAGTGGATCTGTTCCAAGTTATGATATCTTTAATGAACTTAATCACCATCATAAGTCTCATGATTGGGACATAACGA ATGTGGGCCTAACATTTGATGCCTCTCAGCATGCAAATCCTTTGCAAGGTAACATTGATGTCTCACCGTCAGTTATAGTCCATCAGAGTTTTTCCTCCAT CCACCAGACTGGACAAAATAGAGATGCTACTTCAATCGGAAAAGGTATGTTCTCAATAGGTGAAGGCATGAGTCACGGTAATCTTCAAAACCTTGCTCAA CACCTCAATACGCATCTTGTTGACAATTCAGTAAAGGTCAAGGCTGAAAGAATTCACGATCCAAGATCCCAGATTAATCTCTTCCCTGATCAGTATGCGC AGGAGGATCTTATGAGTGCACTTCTGAAACAGCAAGGAGGCATTGGATTAGCTGAAAATGAGTTCGACTTTGATGGATATTCGTTAGACAATATTCCAGT CTAGAACATATTCTGCCGGTTCTCTTTCTAATTGCAGTCGCCAATGTAAATAGTTGGTGTTCCATGTGGACCTATTCATATTCTGCAGTTAGTTAGTTTG GACCTTAGTTATTGTTCAACAAATAGAATTTAATTGATGTAAAAAATCCACGCGTCAAGGACTAATGTATTATGATGGTTTAGTCTAGAAGCTCATGACG AATAACTATAAACTTCTGCTGC
• Tissue: pods
• Gene name: LI_gene_188273;
• Additional information: details;

Expression of Ll_transcript_447002

FPKM

• PAB: 11.1
• PNAB: 13.8
• PS1: 21.6
• PS2: 8.7
• PS3: 14.8
• PW1: 19.2
• PW2: 18
• PW3: 15

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_447002

• Blastp: Two-component response regulator ARR2 from Arabidopsis with 51.58% of identity
• Blastx: Two-component response regulator ARR2 from Arabidopsis with 51.09% of identity
• Eggnog: two component, sigma54 specific, transcriptional regulator, Fis family(COG2204)
• Kegg: Link to kegg annotations (AT4G16110)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019425652.1)
• Pfam: Response regulator receiver domain (PF00072.23)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;