| Id Trinity | TRINITY_DN51899_c1_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_445779 |
| Sequence | CCACTCTATCTGTTCATCAGTTGGTTGAGAATGCTGATGAGTGCATGGTTTTGGATAATGAGGCCCTCTATGATATCTGCTTCAGGACTCTCAAATTAAC TACTCCTAGCTGTAAGTACTTAATGCTCAGCTTATCATAAGAATGGATTAAGTTGTAAATACATGTTTAGGTTGAACATCACATACTCCAAGAATGCCTA TTGTTAACTTATACATAGTTATATGACTGCTTCAGAAGATTATTGTGTTTTAAGATATTAGAATCATTATGAACTAGATCTGTAATTCAAAACCTTTAAT GAATTACTTATTTAATTTGTGATTGATCTTAATATTTTTGGCTTTAATAATGAGTTGGATGACCTTGTCCTGTTCTGTATTATTGCTGTTTTAGTTACTC AAAATATGATTGTTTGATGCAGTTGGTGACTTAAACCATCTGATCTCAGCAACCATGAGCGGAGTCACTTGCTGCCTTCGTTTTCCAGGTCAACTCAACT CTGATCTCCGAAAACTGGCTGTAAATCTCATCCCCTTCCCTCGCCTGCACTTCTTCATGGTAGGCTTTGCACCCCTCACCTCCCGTGGATCTCAGCAGTA CCGTGCTTTAACAGTTCCAGAACTGACCCAGCAAATGTGGGACGCCAAAAACATGATGTGTGCTGCTGATCCTAGGCACGGTCGATACCTCACCGCATCG GCAATGTTCAGGGGTAAGATGAGCACCAAGGAAGTAGATGAGCAAATGATCAATGTCCAAAACAAGAACTCTTCCTACTTTGTTGAGTGGATCCCCAATA ATGTTAAGTCAAGTGTTTGTGACATTGCACCTAGAGGCCTTTCCATGGCTTCGACCTTCATCGGAAACTCAACCTCCATCCAGGAAATGTTCAGGAGAGT TAGCGAGCAATTTACTGCCATGTTCAGGAGAAAGGCTTTCTTGCATTGGTACACCGGGGAAGGCATGGATGAGATGGAGTTCACTGAGGCCGAAAGCAAC ATGAATGACTTGGTATCTGAATATCAGCAGTATCAAGATGCCACTGCTGAAGATGATGAGTATGAAGAGGAAGAAGAGGATGACTATCAACAACATGACA TTTGAGTTCGATTTTCGGTATCTTGCGGTGGCTATATGATGGAGTACATGCTGATGCTGCAACTTCCTGTTGCCGGTTCATTGCTTGCCTTTTCGTGGGG ATAGTTACTGGTCTGGCTAGCATTAGCAGCAGCTATATATGCCATTCTATTCTATAAACTATTTCTATTTTTAATTTATGTTTCAATGTACCATTTTGGT TGGGAAGAAGAAAGACAACTGCTATTGTTCTAAGCATCAATTGCAATCTTTGAGTATTGATTAATATTTTGAAGTATTTTTGAGTAAATGTTGTGTTTTG AATGAAATGTTTTGCTCTAACAAACATAAGTAATTATTCAACAAGGTTAAAATGGTTGTTGGGACTTGAGAGTCTTTTATACTAAAAGATCTCATTATGA TGAGCCAAAAGTTGATGGTGTGAAATTG BLAST |
| Tissue | pods |
| Gene name | LI_gene_188408; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_445779
| Blastp | Tubulin beta-2 chain from Eleusine with 93.52% of identity |
|---|---|
| Blastx | Tubulin beta-3 chain from Pisum with 98.57% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (NP_001239638.1) |
| Pfam | Tubulin C-terminal domain (PF03953.16) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |