Id Trinity | TRINITY_DN51899_c1_g1_i19 |
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Name Transcript | Ll_transcript_445807 |
Sequence | CATTGATTCTGTGCTTGATGTTGTTCGCAAAGAAGCTGAGAACTGTGATTGCTTGCAAGGTATGTGTTTTTTGTTTTTTTTAATGAAAGGTGAAAACTTT TTGTACTTTTTGTGGTTTATTTTGAATTGGGTTTTTGTTTTTTATGTCTTTTTTCATGAGGGGTGGTTTTGAAATGGTTATGTTTTTTAGGTGATACTTT TTGAATTGGGTTTGTGGTTTTTTTCTTGTGTTTTACGATTGATTTTGAAATGGGTATGTTTTTTCCCCATGAAAGGTGAAAATTGTGTGTTAAAGGTGGA AACTTGATGTAAAGGTGTAATTTTGCAATAGATTTGTTTTACAATTAAAGGTGGAAACTTTGTGTTTTGTGGAATTTGCGTGTAGTATGGTAAGGGTTGA TTTTGATAAAAGATGAAAGCTTTTTTTTATTTTTGTGGCTGATTTTGAATTTGGTATGTGTAGTTTTTTATTTATTTCATTAATTATGAAATCTATATTT TTGAATATTTTTTTGGTTAATTTTCAAATCTGTATTTTGGTTTTGTTCATTTTTCGAATGAAAGATGGAAACCTTGTGTTTGTGCCTTTGATCTATTTTG TTGCAGGTTTTGAACTGGGTTTGGTTTTTCATTTCAGGTTTTCAGGTGTGCCATTCTCTTGGTGGAGGAACTGGGTCTGGAATGGGTACCCTTTTGATTT CAAAGATCAGGGAAGAATACCCTGACAGAATGATGCTTACTTTCTCTGTGTTTCCATCTCCCAAGGTTTCCGACACTGTCGTGGAACCATACAATGCTAC TCTCTCTGTTCACCAGCTTGTTGAAAATGCAGACGAATGTATGGTGCTTGACAATGAAGCTCTCTATGACATTTGCTTCCGTACCTTGAAGCTCACCACG CCGAGCTTTGGTGATTTGAACCATTTGATATCAGCAACTATGTCTGGTGTTACATGTTGTTTGCGTTTCCCGGGTCAGCTTAACTCTGACCTGAGGAAGC TTGCCGTGAATCTCATTCCGTTCCCTCGCCTTCACTTTTTCATGGTCGGGTTTGCTCCTTTGACCTCCCGTGGTTCACAGCAATACAGTGCTCTGAGTGT TCCAGAGCTCACACAACAAATGTGGGATGCAAAGAACATGATGTGTGCTGCTGATCCTAGACACGGGCGTTACTTAACAGCATCTGCCATGTTCCGTGGC AAGATGAGCACCAAGGAAGTTGATGAACAAATGCTTAATGTCCAGAACAAGAATTCGTCTTACTTCGTAGAGTGGATACCCAACAATGTTAAGTCCACAG TATGTGATATTCCTCCATCTGGGTTGAAGATGGCATCTACATTCATTGGAAACTCGACCTCAATTCAGGAAATGTTCAGGAGGGTGAGTGAGCAATTCAC AGCTATGTTCCGAAGAAAGGCTTTCTTGCACTGGTACACTGGTGAGGGTATGGATGAGATGGAGTTCACCGAGGCTGAGAGCAATATGAATGATCTAGTC TCTGAGTATCAGCAATACCAAGATGCAACTGCAGATGATGAGGGGTATGAAGATGAGGAAGAAGAATTTCAGGAAGAGGATTAAGTACTTATTGAACTCT TTCGCTTATTGTTGTTATTGTAATCCTAGGATTATATTTCTGAGCATGCTTAAATTGTTGAAATGGTGCCCATATATATAAATTGAGAACTCTGGGTGAT TAATTTTCTTATCAGTACTAAACGGAGATTTGGGTAAAAAATTTCTCTATTGCAATTGTACTCAACATTGTAAATAATGTGGTAAGATCCTAATACTTAA TCTTCAAATATCAGCTTATATTTATCCAAAAGGGGTTAGCTGATGTATATAAATATGGTCCTTCAAAGTTTGGTACTTTTGAGGTCAAGAAAATTCCCTA CCACCTCATGAA BLAST |
Tissue | pods |
Gene name | LI_gene_188408; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_445807
Blastp | Tubulin beta-1 chain from Zea with 98.94% of identity |
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Blastx | Tubulin beta-1 chain from Zea with 98.01% of identity |
Eggnog | protein polymerization(COG5023) |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019434231.1) |
Pfam | Tubulin/FtsZ family, GTPase domain (PF00091.24) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |