Ll_transcript_445791

• Id Trinity: TRINITY_DN51899_c1_g1_i8
• Name Transcript: Ll_transcript_445791
• Sequence: CCACTCTATCTGTTCATCAGTTGGTTGAGAATGCTGATGAGTGCATGGTTTTGGATAATGAGGCCCTCTATGATATCTGCTTCAGGACTCTCAAATTAAC TACTCCTAGCTGTAAGTACTTAATGCTCAGCTTATCATAAGAATGGATTAAGTTGTAAATACATGTTTAGGTTGAACATCACATACTCCAAGAATGCCTA TTGTTAACTTATACATAGTTATATGACTGCTTCAGAAGATTATTGTGTTTTAAGATATTAGAATCATTATGAACTAGATCTGTAATTCAAAACCTTTAAT GAATTACTTATTTAATTTGTGATTGATCTTAATATTTTTGGCTTTAATAATGAGTTGGATGACCTTGTCCTGTTCTGTATTATTGCTGTTTTAGTTACTC AAAATATGATTGTTTGATGCAGTTGGTGACTTAAACCATCTGATCTCAGCAACCATGAGCGGAGTCACTTGCTGCCTTCGTTTTCCAGGTCAACTCAACT CTGATCTCCGAAAACTGGCTGTAAATCTCATCCCCTTCCCTCGCCTGCACTTCTTCATGGTAGGCTTTGCACCCCTCACCTCCCGTGGATCTCAGCAGTA CCGTGCTTTAACAGTTCCAGAACTGACCCAGCAAATGTGGGACGCCAAAAACATGATGTGTGCTGCTGATCCTAGACACGGGCGTTACTTAACAGCATCT GCCATGTTCCGTGGCAAGATGAGCACCAAGGAAGTTGATGAACAAATGCTTAATGTCCAGAACAAGAATTCGTCTTACTTCGTAGAGTGGATACCCAACA ATGTTAAGTCCACAGTATGTGATATTCCTCCATCTGGGTTGAAGATGGCATCTACATTCATTGGAAACTCGACCTCAATTCAGGAAATGTTCAGGAGGGT GAGTGAGCAATTCACAGCTATGTTCCGAAGAAAGGCTTTCTTGCACTGGTACACTGGTGAGGGTATGGATGAGATGGAGTTCACCGAGGCTGAGAGCAAT ATGAATGATCTAGTCTCTGAGTATCAGCAATACCAAGATGCAACTGCAGATGATGAGGGGTATGAAGATGAGGAAGAAGAATTTCAGGAAGAGGATTAAG TACTTATTGAACTCTTTCGCTTATTGTTGTTATTGTAATCCTAGGATTATATTTCTGAGCATGCTTAAATTGTTGAAATGGTGCCCATATATATAAATTG AGAACTCTGGGTGATTAATTTTCTTATCAGTACTAAACGGAGATTTGGGTAAAAAATTTCTCTATTGCAATTGTACTCAACATTGTAAATAATGTGGTAA GATCCTAATACTTAATCTTCAAATATCAGCTTATATTTATCCAAAAGGGGTTAGCTGATGTATATAAATATGGTCCTTCAAAGTTTGGTACTTTTGAGGT CAAGAAAATTCCCTACCACCTCATGAA
• Tissue: pods
• Gene name: LI_gene_188408;
• Additional information: details;

Expression of Ll_transcript_445791

FPKM

• PAB: 0
• PNAB: 0.7
• PS1: 0.2
• PS2: 0.1
• PS3: 0.2
• PW1: 0.1
• PW2: 0
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_445791

• Blastp: Tubulin beta-2 chain from Eleusine with 94.42% of identity
• Blastx: Tubulin beta-1 chain from Zea with 98.57% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019465027.1)
• Pfam: Tubulin C-terminal domain (PF03953.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;