| Id Trinity | TRINITY_DN51900_c4_g2_i2 |
|---|---|
| Name Transcript | Ll_transcript_398052 |
| Sequence | ATCAATTCGAGGGAAATCCAATGGTTTGAATCAGTGGTAAATCTAAACCATTGGATTTCCAATAAATCTGGATTCACCATCACAGTTCAGTTGGGGTGCA ATGCTAAGGTTTTTGGAGTCTGCAAAACTGAGTCCTAACTACTTGAGCCATATTTTTGGGTGATAGTCCATAGCGTAATGGTTTTGGGAATATCCTTTAA AACCTTGGTCTTTGCTACTGCGGCGTCGCATTTGTAACGATTGCGGCTAGCCACAATGGTAACCACAATTTCAACCGAAATCTCATTTGAGTCTTGTCGG AAAAATATGAAATGATCGAGGAAATCTGAATAGGATAATGAATACTTCCTCTCCTCCCTCTGACAATCCCTATTTAACAGTTTGTAAGTGAATCTGAATT AGCATCACTCTATATTGTTTCAAGATGAATGAGTGTTTGGTACTCTTTCAGCTTTACAAGAGATGCCTATTGCAATCGACACTGACAAGGCAAAATCTCA ACATTATGAGTTACCAACCTCTTTCTTCAAGCTGGTTCTCGGAGAGAATCTCAAATACAGTTCTTGTTATTTCTCTTCTCCCTCAAAGACACTGGAAGAG GCTGAAGAAGCAATGCTGGAACTATACTGCGAGAGATCAAAGCTGAAAGATGGTCATACAGTTCTTGATATTGGATGCGGCTGGGGATCACTGCCTTTAT ACATTGCCAAGAAGTACAGTAACTCCAGGGTCACAGGAATCTGCAATTCCACAACTCAAAAAGCTTATATTGAGGAGAGGATCCGGGATCTTCAGCTACA AAATTTGGATATCATTGTTGCAGATATTCGCACATTTGAAATGGAAAGGTCTTTTGACAGAATAATTTCCATAGAAATGTTTGAGGTTGGCGTTTGTGAA TAAATAATCTATATCAAAGTCATGTTTTCCGAAACTTTAAAGTCAGTTTTGATATTGACGCAGCATATGAAGAACTATGGAGAACTTCTCAAGAAGATAT CCAAATGGATGAAAGAGGACAGCCTTTTATTTGTTCAATATTTCTGCCATAAAGTATTTGCTTACCACTTTGAGGACAAAGATGATGATGACTGGATTAC CAGATACTTCTTTACCGGAGGAACTATGCCTTCAGCAAATCTGCTTCTTTACTTCCAAGGTGATGTTACTGTGGTCAACCATTGGCTAGTAAATGGGAAA CATTATGCTCAGACCAGTGAGGAGTGGCTGAAAAGAATGGACAAGAACATTACTTCCATCAAGCCAATTATGGAATCAACGTATGGCAAGGATTCAGCTA CCAAGTGGACTGTCTATTGGAGAACATTCTTCATAGCAGTAGCAGAACTCTTTGGATACAATGATGGCGAAGAATGGATGGTTGCACACTTTCTTTTCAA AAAGAAATAAAATAAGCCACAACCAAATGGCTTAAGGATTAAACAAGATTGCATGCTACAATCATGATTAGCTTATTTTATTTGGTTCTCTGTTTGCAGC TTTATATGTTTTAGCACGTATTGCCTAGCATAAACCTTATTTTACTTTTGGCGTGTGGATTTGGAATTGTAGTTAGGAATTGTAATTCTAATTTCACTTG GAATTGTGAACATAGAATTATAAGCTCAATTTCAATTACGTTTTTGGAGGTAAGAATATAGTTAAGTTAATGATTTCAATTTAACGTTGGAAACTTTTGG TACTTTATAAAGAAGGACGTAGAGTAGAGAGTAGAGACTCATGACAGAAAAGCAAAATATGTTTGTAACACAGATATGCTTGTGTGTTATCACATGTATT AATGAGGAATATTGATGCAAAAATAAAAGTGAGG BLAST |
| Tissue | pods |
| Gene name | LI_gene_188426; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_398052
| Blastp | (S)-coclaurine N-methyltransferase from Thalictrum with 53.19% of identity |
|---|---|
| Blastx | (S)-coclaurine N-methyltransferase from Thalictrum with 50.15% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (AAU20766) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019417540.1) |
| Pfam | Mycolic acid cyclopropane synthetase (PF02353.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |