Ll_transcript_398066

• Id Trinity: TRINITY_DN51900_c6_g2_i1
• Name Transcript: Ll_transcript_398066
• Sequence: AAGAAAGAAAGAAGATAATATAAAAGGTGGAAGGGATAAGAAATTAGTGAGTGATTGAGTCTTTGTCATTCTGATATGATTTCTTCAATGGCTTTCACAT TCACACTTCCTCATTCAAATCTTGTTCTCAATCCTCACTCTATTTTTCCTACACTTACATCAATTCGAAAGCAACGTTGTTATTCAAGAGGAACAGTTAC TATTGTTAATGCTTCAGCTTCTCAATCTGAAAATGGAGCTGTGGCGGTTACTACTTCTGAAAAGCCTAACAAAGATATTCAAAGAACTGATTATGGAAGA CAATATTTTCCTCTTGCTGCTGTTATAGGCCAAGATGCTATAAAAACTGCTCTTTTGCTTGGAGCTACTGACCCAAGAATTGGGGGAATTGCCATACAAG GAAAGCGAGGAACGGCTAAAACTGTAATGGCACGGGGGTTGCATGCGGTACTGCCACCTATTGAAGTAGTAGCAGGGTCAATTGCCAATGCAGATCCAAC CTGCCCAGAAGAGTGGGAAGATGATCTTACCCAACACCTGGAATATGATTCTTCTGGAAATGTTAAAACCCGTATTGTGAAGTCTCCCTTTGTTCAGATT CCTCTAGGAGTCACGGAGGACAGACTCATTGGATCAGTTGATGTTGAGGACTCTGTGAAAACCGGCACAACTGTTTTCCAGCCAGGCCTACTTGCAGAAG CTCACAGAGGAGTTTTATATGTTGACGAGATTAATCTTTTGGATGAGGGTATTAGTAATTTGCTCCTTAATGTATTGACTGAAGGAGTGAATGTTGTTGA AAGAGAGGGAATCAGCTTCAGGCACCCCTGCAGGCCCCTTCTGATTGCCACCTATAACCCAGATGAGGGTGCTGTTCGTGAACATTTGCTTGATCGCATT GCAATTAATTTGAGTGCAGATCTTCCAATGAGTTTTGAAAACCGTGTTGCGGCTGTTGGAATTGCTACAGAATTTCAGGAAAACAGCAGCCAAATATTTA AAATGGTTGAAGAAGAAACAGACTTAGCAAAAACTCAGATCATCTTGGCTAGAGAGTATTTAAAGGATGTTACTATTAGCACTGAACAATTAAAGTACCT GGTTCTTGAAGCTTTACGAGGTGGTTGCCAGGGGCACAGAGCTGAGCTATATGCTGCCCGTGTTGCAAAGTGCTTAGCTGCTCTGGAAGGACGTGAAAAG GTTTATGCAGATGACCTTAAAAAAGCTGTAGAATTGGTCATTCTTCCCCGTTCAATCGTTAGTGAGAACCCACCAGATCAACAAAATCAGCAGCCTCCAC CTCCACCACCTCCACAAAACCAGGAATCTAGCGAAGAACAGAATGAAGAGGAAGAAAAAGAGGAAGAGGATGATGATGATGATAAAGAGAATGAACAACA GCAAGAGCAATTGCCTGAAGAGTTTATCTTTGATGCTGAAGGGGGCTTGGTGGATGAAAAACTCCTCTTCTTTGCCCAACAAGCACAGAGACGCCGTGGG AAGGCTGGAAGGGCAAAAAATGTCATATTTTCAGAGGATAGAGGCCGATACATTAAACCAATGCTTCCGAAGGGGCCTGTAAAGAGGTTGGCTGTTGATG CAACCCTTAGAGCTGCTGCGCCTTATCAAAAGTTGCGAAGGGAAAAGGACCCTGAAAGCCGTAGAAAAGTATATGTTGAGAAAACTGACATGAGGGCAAA GAGAATGGCACGCAAAGCAGGGGCTTTGGTACACATGTTCTCACTTCCGAGCTAGCATTTAAAGTTATTTATCAAAATTAATGAAATGAATCATTTTAAA TAATTCTACATTTGTACTCTACGTTTTCTCTAAACATCCACGATCTTCCACTTCTATTGCTTCTAAATTATTCTCAACTTTCCTTGCCATCCTTCCTTTC CTGTATTTTTTCTCTGTAGTTATCGCTTTTATGGCAATCCGCCGTTGCTATACTTATTTTTAAAAATAGTGTTGTATCTTTGCTTATATTTTAGGTTGTA CTATCTGTAATTAGTAATTGTTACGTCAAACTCAGAAGATATTACTGATGTTGGTGTTATACAAAGTCTTGAGAGTTGTCCTATTATCAATATGATTATT AGTAGTTAATCCATTCTGTTTTTTAAAGGATTTAAATGATAACGTTTTTGCATCGTATTCTGCGTAATTAATTAATTAATTTTAGTTTAATTTTTTTACT TCACTTGGCCACTTGGCTAGTATAGAATATAATTTAAACCTCAAGGGTAGATGTGAAGTTTGTTATGAAGCTACTGATAAAAAAATTGGAATAGTTGGTG TAAGCTTTTATGCAAAAAAATAAAAAAAAGGCTTATAACTATCGCAGGTGATATTTGTGGTTGATGCAAGCGGAAGCATGGCATTGAATAGGATGCAGAA TGCAAAAGGTGCAGCACTTAAGCTTCTGGCAGAAAGTTATACAAGCAGGGATCAGGTATCCATAATTCCATTCCGTGGAGATGCAGCTGAAGTTCTCCTG CCACCTTCAAGATCAATTTCAATGGCAAGGAAACGTTTAGAAAGGCTTCCATGTGGTGGAGGGTCCCCCCTTGCTCATGGTCTTACCACGGCTGTTAGAG TTGGATTAAATGCGGAGAAAAGTGGTGACGTTGGACGCATAATGATTGTTGCAATCACTGATGGCAGAGCCAATATATCACTGAAAAGGTCAACTGACCC TGAAGCTGCTGCCGCTTCCGATGCCCCTAAATCTTCACAGCAAGAATTGAAGGATGAAATTCTTGAGGTGGCTGGGAAGATATATAAAGCAGGAATGTCT CTACTTGTCATTGACACTGAAAACAAGTTTGTCTCAACGGGTTTCGCAAAGGAGATTGCTAGAGTTGCCCAAGGGAAGTATTACTATTTGCCAAATGCTT CAGATGCTGTTATCTCATCTGCAACAAAGGAAGCTTTATCAGCTTTGAAAAATTCATGATACCTTATGACAATTAAGTAGCCAAGTTCCACTCTTTAAAG CCTTGTATCATGTAATCTTAGTGTAAATTTGGTGGGAAGAAAGCATATTTCAATAACAAATGAGAATTGTTACTATTATAGATTTCTAGTTCATACACCT CTCAAATAGGCTTATCTTTGAACAACCATAAGATTTGTAAGTAAACAATGGGGAAGAATTAAAAGACAGGAGGGAATCAAGTTACTTCAAGAGTAAGTTT TTTAAACTTGCTATTTCTCCCCTTAAAAGACATGGT
• Tissue: pods
• Gene name: LI_gene_188434;
• Additional information: details;

Expression of Ll_transcript_398066

FPKM

• PAB: 0.5
• PNAB: 0.9
• PS1: 0.7
• PS2: 0.6
• PS3: 0.4
• PW1: 0.3
• PW2: 0.7
• PW3: 0.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_398066

• Blastp: Magnesium-chelatase subunit ChlD, chloroplastic from Pisum with 81.72% of identity
• Blastx: Magnesium-chelatase subunit ChlD, chloroplastic from Pisum with 79.1% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019421319.1)
• Pfam: Magnesium chelatase, subunit ChlI (PF01078.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;