Ll_transcript_398537

Id TrinityTRINITY_DN51901_c2_g1_i16
Name TranscriptLl_transcript_398537
SequenceCATATTTTTCGCGTTACGGACACTCGACTTAGACACCAAATTTTCCATCTCCGTTTCAAACTCAATTCAACTACTGCATCATTCACAATTCTTCTTATTC TTCACTTCAACTGTGAAATTATAAATCTCGATTTCAATTCCATTTCCAAAAACTTGTTTCTCACACTTACCTTCATAATTTGACACCCATAGTTTTATTT CGCATCTCACTTTTTTCGAACATTGATTTCTTCAATGGTTTTCCTTCGCTTCATTAATCTTCCATGTTTTTACACTGTTATGTAACAGGAAGATGAAATT TCACGCATCGTTCTCAAGCTGGTAGGTGCAATTTTGGAATTTCGTTGTTTGAGGTGAAATTAGGGTTTCGTATGTGAAGTTGAACTATATATAAGGGAAT TCATCAAAAGCTGTGTTTGAATGTGAATTGAAGTTTAGGGGACTTGGTTTTAGCTCATTAGGTTTGAAGAAATTAGAAAGTTTCGTGGGTGAAGTAAAGT GAAGAGTAAGAGATGTTTTACTCTCAGTTTATATTGGCCAAGAAAGGGCCACTTGGGACTATATGGATAGCTGCACATTTGGAGAGGAAGCTCCGGAAGA ATCAAGTGGCGGATACCGATATCGGCGTCTCTGTTGATTCCATTCTTTTTCCTGACATGCCAATCGCACTCCGTTTGTCCAGCCATCTTCTGCTTGGTGT TGTGAGGATTTATTCAAGAAAGGTGAATTACCTTTTTGATGACTGCAGTGAGGCATTGCTTAAGGTAAAGCAAGCTTTTCGCTCCACCACAGTTGATTTG CCACCTGAAGAGTCTACTGCTCCTTACCATTCCATCACCTTACCAGAGACTTTTGATCTTGATGATTTTGAACTACCAGATAATGAGCTATTTCAAGGTA ACTATGTTGATCACCATGTCAGTACTAGGGAGCAGATTACACTGCAAGATACCATGGACGGTGTGGTCTACAATAGTTCACAGTTTGGATTGGACGAGCG CTTTGGTGATGGTGATGCATCTCAAATTGGTTTAGACCTTGATGAGGTTCTGTTAACAGACAAAGCTGCTACTCTGGAGCATGATGACTGTAGTGCCGGT CCTCAAAAAGATGAAATGAAAGAGGAGATTGATGAGTTTGCCACTGCTGCTGACGCCGGTGAATGTGCTCAAGGTCCATCTACTCCTGGACTAGAAGAGC CAAACTTGTTTGGTACTCAGGTGGATCAGGTCAATAATGAAGTTTATGATAATAATTCAACAGATTTGGTATCACTGAAGAGCAGGCAAGAAGTTTACCC TGCTCAGCAAAGGGATGAAGATGTTATTGATAGCTCTTTGGAAAATAACGTGCTGCCTGTCAGTGTGGATATAAGTCATGAAGATGATGGCTGCCTTCCA GTTGAATTGGATAGAAATAGAGAGCAACAGGAGCATTTGGAATGTATAATTGTGACAAATGATCAAGATAGTCTTATGCCTAATGATCATTGTTCAACAT TATCACCCTTGATAGTCAATTCCAATCAAGAATGTGCAAGTGGGATGATCAGTTCTTCTGGTATGCCCGAGAAGATGGGAGACTTATATGATGGAGCTTT GATGAACAATGAGCCACTTGTGACTCCTTTGGACCAAACAATTACGAATTGTGTTGTTACTGGAGGAGTTAACGTAAATGAGACCGGTTCATCTCCTAGT TGTTCTCATGTTACATCTGATCAAGAAAATATTTCTTGTAAAAATTTGTCAAAGATGGATGGATCACGAGAGCCTGAATCAGGTGGTCATTTGGAGGATG ATCACACATTGCCGAAGCATGAAATTCTGAATGCCATTGAAATGTCTATCAATGAGGGGCAGTCCTGTCTGATTGATGAGGCTCAAGTATCTAATGTTAG AAGTCCTCGAGGATCAGCTGGTGAACCTCAAGTTGTTGATGGGGAGGCTCAGACCTCTCAACAACTGATGGAAACAGAGTCTTCAAACCATATTCTTCAT GCAGATGTGCAGCCCATCGAGTCACACCTTCGGCCATGCACCTCCCAGCTGAGCTACCATTCTTTGTCAACTGTTGATGGTGAAAACTGTGTTGCAACTG ATGGCGCAGATCCTGCTATAGGTCATCATGAGACCATAGGGCCATTTGTATGTGAAGGAGTCTCAGATTTGAGGAAGTCAGATGTGCAAATTGAGAGTCA GATATTTTGTGATGGAGTGGAAAGTATAAGCAAATCTGCTGCTTCTGACATGCCAGAGCCTGAAAAAATGCTTTCCGTAGCATATCAAAATGATTGTGAA ACAAATAGTCATTTGCCAATGGAGTCTACTCCTAACAACCAGGTTGTATCTGATGGTCATACAGGTGCTGCAGGAGTAAGTTCCATTTCAGGTAAAAAGC GTAGTTTCACAGAAAGTACTCTTACAGTGCATAGTGTGGATTTCGTTCAATCGTATGGTGGGACTCAATCCAAGAGAACCAGAGAGTCCATTCCAGATGA TGATGATTTATTGTCTTCCATTTTAGCTGGTAGAAGATCTTCAGTTTTGAAATTGAAACCCAGTCCGGTTGCCCCTGAAACAGTATCAATGAAATACTCT CGTTCTGCACCGCGCATTTCTGCCTTAAAGAGGAAGGTGCTCATGGATGATATGATGGTCTTGCATGGCGATACAATACGCCAACAGTTGACAAATACTG AAGATATACGTCGCATACGGAAAAAAGCTCCTTGCACTCAGCATGAAATTTTAATGATTCAAAGACAATCTGCGGAGGATGAGATTTTTCATGAATCAAT ATTTACAGGTCTGTCTGCTGCTTTGGTTATTCTGCGAAATGATTCATTTGATCTGACTGGAATCAAGATCTGCGATAATGGTTTAGATAGTTCTTTCTTG GAAAAAACAAATGATGAAGGGTCCCATTCTAGAACAAATACTGAAACTCATGTTGTGGAAAGGAATATTGAAACTATGGCAGTCCAACTCCAAGGAGATG CAGAAGCTCAACCTACCGAGGTGCCTGTTTTGTCTGAGACTCATCAGGCAGGAGTTAACTTGGGATCTCATGATATTGATGTTCATGGTCATTCCAATAT TGTTTCTAATGTGGAAGAGCTTGGCAGTTCTCCAAACATTGAAATGAACAATGCTAGTGGAAACGTTGACGTTTCCATTGCTGAAAAATGCTCTGTTGGC CCTGGGCTTGAATCTTCATCCCTAACGGTGTCTGAAAATAACCTTTGTGTGCCAAATGATTGTGTTGCATCGTTTCCTCTTTTGGATGAAGCAAATGATC TTGTTGGTTCTATGCATACAGATATACCAACCATGCCAACTGATCAGAATTTAAATACATTCCCTCTTGTAGAGGATGAGTTTGTGGAGAAATGTAATAG AAGTGGAATAGATGCTATTGAAGTAACTGAGCGTAGTGTTGAAATTAGAACACAATATCAAACAGATGATTTGGAAGCTAATGATTTATGTTCATCCATG GCTACTGGCTTTAAGGAAACTGATTTATATAATGATAATAAGGCTTCCTTCAACAGAGAACTGCCTTTAGAGGAAAATGTAAACAGCCTGTCAGGGGGCT TACATGAGGACCAAATTGTTGCTTCTGAGCTGGGGTCAAGGGGGTGTGATGACAAGGTCTCAAGGCATGGCCCCATATTTAGTGAAAATACTAAAGTAGC ACTTATTTTGGATGAAAATGAGACTTCTCTGAATGAAGGAAATCAAGTTTGTGAGGAAGCTGGACAACATTCTGTAGCACTTGTTCTGGATGAAAAGGAA ACTTCTCTTAATGAAGAAAATCCAATTTCTGAGGAAGCTGGACAACATTCTGTAGCATTTGTTTTGGATGAAAAGGAGACTGTTCAGAATGAAAGAAATT CAGTCTGTGAGGAAGCTGGATTACAGAGTACATTGTCCCCTGAGATCCCAGCTGTTGAGAGTCCTTTGGTAGATCGTAATGATGAAAATTTCATAGATGC TAATGACACAGGGTTTTTGAATGTTGGTGATGATGAGATGATTGAAGATGATGATGATGATTTTATGCCAAGTGCTGAAGGATCTCACCTTGAAAATAGT GGATGGTCTTCCCGGACCAGGGCTGTTGCCAAGTATCTGCAAATTTCGTTTGAGAAGGAAGATCTACATGGAAGGCAGAACCTGTGCCTTGACAATATAT TAGCTGGTAAAACACGTAAGGAAGCATCAAGGATGTTTTTTGAAACACTGGTATGTTCTTGGTGATTATTTTAGCTGACATGTACTATTTATCTATGTCT AATGAAGTTTGTGCTGTTAGTTTCTTTTTTTTGTATTTATAAATTTGACATCATGTTTAGGATAATATTTTAGACATGTTCTGAATTAATCCCTAGAATT ATCCCTGACAGGCAGTTTAGTCCCTAGAAATATTTGTGTTCGACTTACAAATTTACAATGTTAGTATCATTACTCTTTTACAGGGCTAAAAGGAGATCTA AGTTAAGGACCACCGTGATGCGAGTTAATGAATCTTTAGGGACTAACTCGTACACAAATAAATTTAGGGACCAAGCTGAAGTGAAGAATATTTTTAGGGA CTAAACTGCCTACTTACTATTTTATTAATAGAAAACAAGTATTAGGGTTGGGACAGAAAGTAGATAAATTGGACCAAGGATAGGGTATCCTTTAAAAGGA TTTGGCTCCTCTTAAAGTACCCAAAACTGAAAGCGGGGTAAGCAAGGGAAGAGAAAAACTAAGTGGTGTTTGTTTTTATTTTATTTTCAACCATTCATTG TAATTTCAAAAAGACCATCTCATTTTCATGTTGTTTGCTATTTACGAACACTTCGTTATCGCTATATCTTATTTTACTGTCCTTCACAGATTTAGGTTGA GAAACAATAAAAATGAGGTGACAATCTTTAAATTAAGATGAAAACGTGTCAAGTTAAACTATAAACAGTAAAACAAATCCAAATACTACATTGCAGTTGG GTTGCCCAATCACTTGTCGAGTCTGAGATGGGAACACCCTTAAAAGTTAAAACGACTGCGCACTGAATGCAAAAGAGGGC BLAST
Tissuepods
Gene nameLI_gene_188442; 
Additional informationdetails; 

Expression of Ll_transcript_398537

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_398537
BlastpSister chromatid cohesion 1 protein 4 from Arabidopsis with 73.44% of identity
BlastxSister chromatid cohesion 1 protein 4 from Arabidopsis with 73.44% of identity
EggnogDoublestrandbreak repair protein rad21(ENOG410XRB4)
KeggLink to kegg annotations (AT5G16270)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019443833.1)
PfamN terminus of Rad21 / Rec8 like protein (PF04825.12)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;