Ll_transcript_398538

Id TrinityTRINITY_DN51901_c2_g1_i17
Name TranscriptLl_transcript_398538
SequenceAAAAAACCGGTCCATTCATTTCGAGTCACACAGACACTGAGTTATGAAATTTCCTTCTCCGTTTCAAATTCAATTTCCTTTTTCTTCTTCTTCTTCTTCT TATAATCTTCAATTTCATTTCTATCCCCAAAACTTTCCTCTTTCAATTTACCTTCCTTTTTAAAATACCAACTTAGGGTTTTATTTCTCATATCTCACTC TCTTTCCTCTTTCCTTCATCTTCCATGTCTTCGTCAATTCGTTCCCACATCCTTCTCAACCTGCTACCTGCAATTTTCGATTTTCGTTTTTGAGTTGAAA TTAGGGTTTCGGAACTTTTTTGGTTGAAGAGTAAGAAAGGGTGAAGATATGTTTTACTCTCAGTTTATATTGGCCAAAAAAGGGCCGCTTGGGACAATAT GGATAGCTGCTCATTTAGAGAGGAAGCTCAGGAAGAATCAGGTGGCTGATACCGATATCGGCATCTCTGTTGATTCCATTCTTTTTCCTGACGTACCAAT CGCACTCCGTTTGTCCAGCCATCTTCTGCTTGGTGTGGTGAGAATTTATTCTAGAAAGGTGAATTACCTTTTTGATGACTGCAGTGAGGCTTTGCTTAAG GTAAAGCAGGCTTTTCGCTCCGCTGCAGTTGATTTGCCACCTGAAGAGTCTACTGCTCCTTACCATTCCATCACCTTACCAGAGACTTTTGATCTTGATG ATTTTGAACTGCCAGATAATGACATATTTCAAGGTAACTATGTTGATCACCATGTCAGTACTAGGGAGCAGATTACACTGCAAGATACTATGGACGGTGT GGTTTACACTAGCTCACAGTTTGGATTGGATGAGCGCTTTGGTGATGGTGACGCATCTCAAATAGGTTTAGACCTTGATGAGGTCCTGTTAACAGGCAAA GCTGCTACTATGGAGCATGATGACTTAAGTGCCAGTCCTCAATTCTCTTATCAAAAAGATGAAATGAAAGAGGAGATTGACGATCTTCCTACTGCTGCTG ACGCCGGTGAATGTGCTCAAGGTCCATCTACTCCTGGACTAGAAGAGCCAGACTTGTTTGGTACTCAGGTAGATCAGGTCAATAATGAAATTGACGATCA TAATTCAGCAGATTTGGTATCAGTGAAGAGCATGCAAGAAGTTTCCCCTGCTCAACAAAGGGATGGAGATGCTAATGTGCAGCCTGTTGGTGTGGATTTA CATCATGAGGATGATGACTGCCTTCCAGTTGAATTGGATAGAAAAAGAGAGCAAAAGGAGTATTTGGCATGTATGGTTGTGACAACAGATCAAGGTAGTC TGATACCTAATGATCATTGTTCAACATCATCACCTTTGACAATCTCCTCCAATATAGAGTGCCCAACCACCCTAATACCAGAATGTGCAGGTGGGATGAT CAATGCTTCTGGTATACCTGAGAAGATGGAAGACTCCAATGGCTTAGTTTTGATGAACAATGAACAACTTCCTTCGGACCAAACTATTACAAATTGTGTT GTTACTGGAGGAGTTAACATAAATGAAACTGCTGTATCTCTTAGTTGTTCCCATGTTATATCTGATCAAGAGAACATCTCTTGTAAACATTTGTCAAACA TGGATGGATCCCGAGGGCCAGAATCAGATGCTCATATGGAGGATGATCACACATCGCCAAAGCATGAAGTTCTAAATGCCATAGAAGTGTCTCACAATGA GGGGCTATCCTGCTCGATTGATGAGGCTCAAGTATCTAATGTTATTAGTCCTCAAGGATCAGTTGGTGAACCTCAAGTTGTTGATGAGGAAGTTCAGGTC TCTGAAGAACTGATAGAAACAGAGTCTTCAAACCATATTTCTCATGAAGTTGTGCAGCCCACCGTATCACAGCTTCAGCCATGTACCTCCCAGCTGAGCC GTCCTTCTTTGTCATCTGTTGAAGCTTATGGTGCAGATCCTGCTATAGGTCATCATGAGATCATAGAGCCATTTGTTTGTGAAGGAAACCCAGAGTCGGG GACATCAGATGTTCAAATTGAGAGTCAGATATTTTGCGATAAAGTGGAAATTATAAGTAAATCTGCTGCTTCTGATATACCAGAGCCTGAAAAAATGCTT TCCCTAGCATATCAACATGATGGTGAAACAAATAATAATCTGCCAATGGAGTCTACTCCTAACAATCAGGGTGTATCAGATGATCATACAGATCCTACAG GAGTAAAATGCATATCAGGTAACAAGCGCAGTTTCACAGAAAGTACTCTTACAATGCAGAGTGTGGATTTCATTGAATCATATGGTGGGACTCAATCCAA GAGAACCAGAGAGTCCATTCCTGATGATGATGATCTGTTGTCTTCCATATTAGATGGTAGAAGATCTTCAGTTTTAAAATTGAAACCCAGTCCGGTAGCC CCTGAAATAGTATCAATGAAACGCCCTCGTTCTGCACCACGCACTTCTGCCTTAAAGAGGAAGGTGCTCATGGATGATATGATGGTCTTGCATGGCGATA CAATACGCCAACAGCTGACAGATACTGAAGATATACGTCGCATACGGAAAAAAGCTCCTTGCACTCAGCATGAAATTTTAATGATTCAAAGACAATCTGC GGAGGATGAGATTTTTCATGAATCAATATTTACAGGTCTGTCTGCTGCTTTGGTTATTCTGCGAAATGATTCATTTGATCTGACTGGAATCAAGATCTGC GATAATGGTTTAGATAGTTCTTTCTTGGAAAAAACAAATGATGAAGGGTCCCATTCTAGAACAAATACTGAAACTCATGTTGTGGAAAGGAATATTGAAA CTATGGCAGTCCAACTCCAAGGAGATGCAGAAGCTCAACCTACCGAGGTGCCTGTTTTGTCTGAGACTCATCAGGCAGGAGTTAACTTGGGATCTCATGA TATTGATGTTCATGGTCATTCCAATATTGTTTCTAATGTGGAAGAGCTTGGCAGTTCTCCAAACATTGAAATGAACAATGCTAGTGGAAACGTTGACGTT TCCATTGCTGAAAAATGCTCTGTTGGCCCTGGGCTTGAATCTTCATCCCTAACGGTGTCTGAAAATAACCTTTGTGTGCCAAATGATTGTGTTGCATCGT TTCCTCTTTTGGATGAAGCAAATGATCTTGTTGGTTCTATGCATACAGATATACCAACCATGCCAACTGATCAGAATTTAAATACATTCCCTCTTGTAGA GGATGAGTTTGTGGAGAAATGTAATAGAAGTGGAATAGATGCTATTGAAGTAACTGAGCGTAGTGTTGAAATTAGAACACAATATCAAACAGATGATTTG GAAGCTAATGATTTATGTTCATCCATGGCTACTGGCTTTAAGGAAACTGATTTATATAATGATAATAAGGCTTCCTTCAACAGAGAACTGCCTTTAGAGG AAAATGTAAACAGCCTGTCAGGGGGCTTACATGAGGACCAAATTGTTGCTTCTGAGCTGGGGTCAAGGGGGTGTGATGACAAGGTCTCAAGGCATGGCCC CATATTTAGTGAAAATACTAAAGTAGCACTTATTTTGGATGAAAATGAGACTTCTCTGAATGAAGGAAATCAAGTTTGTGAGGAAGCTGGACAACATTCT GTAGCACTTGTTCTGGATGAAAAGGAAACTTCTCTTAATGAAGAAAATCCAATTTCTGAGGAAGCTGGACAACATTCTGTAGCATTTGTTTTGGATGAAA AGGAGACTGTTCAGAATGAAAGAAATTCAGTCTGTGAGGAAGCTGGATTACAGAGTACATTGTCCCCTGAGATCCCAGCTGTTGAGAGTCCTTTGGTAGA TCGTAATGATGAAAATTTCATAGATGCTAATGACACAGGTTTGATTCTGAATCCTTTTCATTGCTGATTCTTATACGTATGCTTAATGTGGTGTCAAGTC TACAACTGTGGTTCCTTGCTCGGCCCATGAAAGAATGGATTCCTCTTGTGGCTTAGGCATTCCTCTTGTGGCTTGGGCTCCCTTGCGTAATATGTAGAGT AGAGTCTAGGGTATATCATGGATGCTACTGCTTTAGTTCCATATTAAGTAGTTTGAATCACTTATTGCCTCTACCCCAATGTACTTGTACGACCACACGT ATAAAAAAATTAGTTGTATATCAATCACTCACTTTAAACTTATGATGTCAAAATTTCCTTAACGTCAACCCTTCCATCTCTACTTTCCTATACTCATAAC TGTGGTCACTCTGTGTAGCTTATTCTTACCAGTCACCAGAGGCTGGTTTTACTTTTTATTATTATTTAAGTTTTGAAAATTAAAATGAATAATTAATATA CCACTGCAAGAAGTAAGGACTGAAACAGGAGACTGGAGCTTTGTTGCTGGTATTCTTTGTTTATTTGATCATTGTAAATCCATCATCTCTCACTTTTCAG GGTTTTTGAATGTTGGTGATGATGAGATGATTGAAGATGATGATGATGATTTTATGCCAAGTGCTGAAGGATCTCACCTTGAAAATAGTGGATGGTCTTC CCGGACCAGGGCTGTTGCCAAGTATCTGCAAATTTCGTTTGAGAAGGAAGATCTACATGGAAGGCAGAACCTGTGCCTTGACAATATATTAGCTGGTAAA ACACGTAAGGAAGCATCAAGGATGTTTTTTGAAACACTGGTTCTCAAGACAAAGGATTATGTTCATGTTGAACAAACAAAACCCTTTTCCAGTATTAACA TAAAACCGCGAATGAAGCTGATGAAGTCAGATTTCTGAAACCTCATATTGGAATCGCTGACGTAGCTGTAAAGATCGATACTGCTGTAGTGTGGTTGGAA TCTGCAGGGTTGAGATAATCTTTTCAACATTTCTCCACTATTTTAGTTATGAGTAGAATTAAGTTATTTAGTTCATTAAGGGGCTGGCCTGGTTGGAAAG TAAGTAGTGTATCATCCTATTGATTGTAGTAAGAATATGGTAAAACGTATATATATATATTTTTATATATCTGTAAAATATCAACATTTGTATTATGTTT AAACGAATACGTCTAAGCAAACATGATATTCTGCCACCCCTAGGCATTAAATATAATGAAGAAAGTGACTTTGTTAAAA BLAST
Tissuepods
Gene nameLI_gene_188442; 
Additional informationdetails; 

Expression of Ll_transcript_398538

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_398538
BlastpSister chromatid cohesion 1 protein 4 from Arabidopsis with 73.05% of identity
BlastxSister chromatid cohesion 1 protein 4 from Arabidopsis with 73.05% of identity
EggnogDoublestrandbreak repair protein rad21(ENOG410XRB4)
KeggLink to kegg annotations (AT5G16270)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019449918.1)
PfamN terminus of Rad21 / Rec8 like protein (PF04825.12)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;