Ll_transcript_398522

• Id Trinity: TRINITY_DN51901_c2_g1_i3
• Name Transcript: Ll_transcript_398522
• Sequence: CCACATTCAGCTGTTTACCTTATAACATACCTTATTTCTTTTCTTGCACTGGCGTTCTAATTTTTTTTGCTTCTTTCTTCTGAAGTACAATACGCCAACA GTTGACAAATACTGAAGATATACGTCGCATACGGAAAAAAGCTCCTTGCACTCGCCATGAAATTTTTATGATTCAAAGACAATCTGCGGAGGATGAGATT TTCCATGAACCAATATTTACATGTCTGTCTGCTGATTTGACTATTCTGCGAAATGTTTCATTTGATCTGACTGGAATCAAGGTTTGTGATAATGGTTTAG ATACTTCTTTCTTGGGAAAAACAAATGACAAGGAGTCCCATTCCAGAACAAATACTGAAACTCATGGAGTGGAAACGAATATTGAAACTAAGGCACTCCA ACTCCAAGGAGATGCAGAAGCTCAACCTATTGGGATACCTGTTTTTTCTGAGTCCCATCAGTCAGAAGCTAACTTGGAATCTCATGATCTTGATGTTCAT GGGCATGCAAATATTGTTTCTCATGTGGGAGAGCTTGACAATTCTCAAAACGTTGAAATGAACAATGCTGGCAGAAATATCGATGTTTCTGTTGCAGAAA ATTTTTCTGTTGGCCCTGGGCTTGAATCTTCATCCCTAACAGTGTCTGAAAGTAACCATTGTGTGCCAAATGATTGTGTTGCATCCGTGCCTGTCATGGA TAAAACGAATGTTCTCGTTGGTTCTATGCATACAGATATACCAAGCATGTCAACTGACCAGAATTTGAATACATCAGCTATTCTAGAGGATGAGTTTGTG GAGGAGAAATGTAATAAAAGTGAAGTAGATACTATTGAAATAACTGAGCACAGTGTGGAAATTAGAACACAAGTTCAAACAGATGGTTTGGAAGCTAACA ATTTATGTGCATCCATGGTTACGGGCTTCAAGGAAACTAATGAATATAATGATAACAGGGCTTCCTTCAATGGAGACCTGCCTTTAGAGGATAACGGAAA CAGCATGCCAAGGGGCTTAAGTGAGGATCAAAGTGTTGCTTCTGACTTCGGGTCAATGGGGTGTGATGGCAAGGACTCAAGGTCTGGCCCCATATTTAGT GAGAACACTAAAGTAGATTGTTTAGACACTGTAGTAACTGTTTTGGATGAAAAGGAAACTTCTCTGAATGAAGGAAATCCAGTTTGTGAGGAAGCAGGAC AACATTCTGTAGCTCTGGGTTTGGATGAAAAGGAGACTATTCTGAATGAAGGAAATCCAGTCTGTGTGGAAGCTGGACTAGAAAGTACATCATTGTTCCC TGAAATCCCTGCTATCGAGAGTCCTTTTGTAGATCGTAATGATGAAAATGTCATACATGCTAATGATTATGATACAGGGTTTTTGAATGTTGGTGATGAT GAGATAATTGAAGATGATGATTTTATGCCATGTGCTGAAGAATCTAGCCTTGAAAATAGTGGATGGTCTTCCCGGACCAGGGCTGTTGCCAAGTATCTGC AGATTTCGTTTGAGAAGGAAGATCTCCATGGAAGGCAGAACCTATGCCTTGACAATATTTTAGCTGGTAAAACACGTAAGGAAGCATCAAGGATGTTTTT TGAAACACTGGTTCTCAAGACAAAGGATTATG
• Tissue: pods
• Gene name: LI_gene_188442;
• Additional information: details;

Expression of Ll_transcript_398522

FPKM

• PAB: 5.8
• PNAB: 8.4
• PS1: 5.2
• PS2: 4.7
• PS3: 7.7
• PW1: 4.3
• PW2: 4.8
• PW3: 4.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_398522

• Blastp: Sister chromatid cohesion 1 protein 4 from Arabidopsis with 61.32% of identity
• Blastx: Sister chromatid cohesion 1 protein 4 from Arabidopsis with 61.32% of identity
• Eggnog: Doublestrandbreak repair protein rad21(ENOG410XRB4)
• Kegg: Link to kegg annotations (AT5G16270)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019443833.1)
• Pfam: Conserved region of Rad21 / Rec8 like protein (PF04824.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;