Ll_transcript_399357

• Id Trinity: TRINITY_DN51903_c4_g1_i10
• Name Transcript: Ll_transcript_399357
• Sequence: CTGCAGGACTTTCACAGTCTCTTGAGTATTTTATGTAAACTTTTTTTTTTAACTCACCGTGAATATTTTAACACAAATACATACATATTTTTTTTTGTGT ATTTTATGCCATCCTTAAAATGCTTAGATATAAGTGAAAGCAACCTTGAATGTTTTCCTGCAAGCATCAAGAAACCTAAAGATCTTGAAGAACTTTACTT AGTTAATTGCAGGAAACTTCAAGCGTTCAATCTCTGCCCGAGCTTCCACAATCCATTGAAGAACTTGACTTATATTATTGCAAGAAGCTTCAGTCACTTA TGGATAGATATGTTCTCTCTTTTGCCGCGATTGGCAGATATGTTCACTTGCAACTCATCATTTATATTCGCGATATTTGAATACTCGTATGCTGAGCCTC TACCTGATGTCAGAATCAAAGAGTGGAATATAGCCAATTTATGCCTCTGAAGTGGAGTTTTATGTCAGAATCAAAGGGAAGCTATGCCTACACATTTTTG ACCATGAAAGGAAAAAGGGAAAAAGAGTGTGACCTTCTGTTATGGTGCTTACATCTTACAGGGCAATTTCTAGTTATCTCTCTCACAGGGATGTAGGTGC TAAACTCATTTATAACTGATGATGTGCTTATAGTATGGCCATGGGGCTCATAATTGGAGACAAAGGAGATTCAGCGCCATGTGGTAATCCGACATTGAAG GAAATTTCGTGGAAAGAAAAACAAGACTTACACGTTGGGTTTAGGAGCTATATATATTACATGGCTTCTTCTTCTACTTTCACAACAATACATTGATCAT CATTATTATATGGCTTCCTCTTCTCCTTCAAATGCATTTCACGTTCCCAAAAAGTACGATGTTTTTATCAGTTTTAGAGGCGAAGACACACGCGGTAACT TCGTAAGTCATCTCTTATCTTCTCTAGAGCGTCAAAAACGGACACATGTATTCATAGATTACAAGCTCCAACTAGGAAGTGAAATCTCAGAAGAACTGTT TAAAGCAATTGAGGATTCTGAAATTTCCATCGTTGTCTTCTCGAAAAAGTATGCTTCATCAAGGTGGTGTTTGGATGAGTTAGTTAAGATAATGGAATGC AAGAAGGAGAATGGACATGATGTTATACCTGTCTTCTATCATGTTCTTCCATCCCAAGTGCGCAACCAGAGAGGGAGTTATGAGGTAGCATTCGAAGAAC ATGCCGGAAAACCTGAAAACTGCACAGATAAGATGACCAAATGGAGAGAAGCCTTGGTTGAAGCTGCTAATTTATCTGGGAAGCACTCTTGCAAAAAAAA TGGTGTTTTAGGGATGAAGCAAAACTCATTGAAGAGATTGTGAGAGATGTTTTGTGTAAATTGAGAAGTAGGTATCCACAAGGGGGATCAAACCATCTTT TTGGTATCAATGAAAATCTTGTTCCTATTGAATCATCATTTAGAGATTTTAGAACCATTGGAATTTGGAGCATGGGTGGCATGGGTAAAACAACCATTGC TAGATGGCTATTTAACAAACACTCTTCTGAATTTGATGGTTCCTGCTTTTTGCCAAATACAAGGGAAAGCTCTGGAGATCATGATCAGTTGCTACATGAT TTACGAGGTAAACTCGTTTCCAAGCTTCTAGTTGAAGGGATAAAAACCGAGGTGGATACCTATTTAATTGAGCGCGAACTCCTTCGTCAAAAAGTTATGG TTGTGCTTGATGATGTTAGTAGTTTAAAACAAGTAGAAAGTCTTGTTGGAAAACTAGAACAGTATGGATTAGGTAGTAGAATCATCATAACAACCAGAGA CAAGGATGTGCTGAAAAAAGTAGTGGATAAAATACATGAGGTTAAGGCATTGAACTCTGAAGACTGCTTTCAACTTTTCTGCTTGAAAGCCTTCAACCAA AACCATCCTAAGATGGGGTATGAAGATTTGTCAAAACTGGCAGTTGATTATGCCAAAAGCATGCCATTAGCTTTAGAGGTTTTAGGTTCTTTTCTTTACG ACAAAGCCGTAGAAGAATGGGAAAGTGAACTGAAAAAACTGGAATGTATTCCCAATGAAGCAATTCAAAGTGTGTTAAAATTGAGTTATGATGGATTAGA TGATAACCAGAAGGAAATATTTCTAGAGATTGCAATCTTTTTGAGGGGACATAAAAAAAGAAATGTCCTGAACCTATTAGTCAGCTATGGTCTCCATGCA GTTATTGGCCTAAGAACCCTCCAGGACAAAGCTCTTATAACTATAAGGGAAGGTGTGGTAGGGATGCATGACTTGATACAACACATGGGCCATGAAATTG TTCGTCGAGAATCTATCGATGAACCTGGAAGACGAAGCCGATTGTGGGATCCTGAGCAAATATACGACGTCCTGAAAGAAAAAAGCGTAAGAGAGAGCCA CTAATTTTTCTAACTAAAATGTGTTGAGTAGAAAATACATGTATTACAATAGTGATTAATTACTTTTATTTGTTATTTTTTGTTTAGCAGGGGACTAATG CAGTTAAAGGCATACTTTTAGATATGTCTGCAATTAGAGATTTAGACTTGAAGGTTGGCACATTCAGAAAAATGAAAAATCTAAGATTTCTTAGTTTTTA TTTGTCATGTAAAACTGGATATAGTACTCTGAGGCTTCCTTTAGGTCTTCACCTATTTTCTGATAAATTAAGTTACATTCAGTGGGATAGATACCCTTCA AAGTCTTTTCCATTGAAGTTTTGTCCAAAGAAACTTGCCATGCTTTTAATGCCTGAAAGCTGCTTACGAAAACTTTGGGATGAAGTGAAGGATCTTCAAA ATTTAAAGATAATAGACCTTAATGGGTCTAGACGGTTGAAGGAGCTCCCAGATTTTTCTTTGGCGTTAAATCTTGAAGAGATAGTTCTCACCGGTTGTGA AAGGTTGTGTCGTATTCATTCATCTATTTTTTCTCTCCACTCACTTGTTGTTTTGAATTTAGATGGGTGCAAAAAATTGAAGAGGCTTGAAGGTGAGAAT CTTTCTGAGGTTCTAAATCTTGACCTACCATCCTTAGAACACTTATCACTAAGTAGAAGCAATATTGAGTCTTTGCCTGCAAGCATCAAGCAATGTACAA AGCTGATAGATCTTGGCTTAGAAGATTGCAAGAAGCTTCAATATCTGCCTGAGCTTCCACAATCCATTCAGGATTTATATCTTGGTCGAAGCAATATCGA GCGTTTGCCAACAAGCATCAAGCAACTTCCGAAACTGACAAAACTTTTCTTGACTGATTGCAAGAAGCTTCAGTCTCTGCCCCTGGAGCTTCCACAATTT ATTAAGGAGTTAGCTCTAAGTGGAAGCAATATTGAGA
• Tissue: pods
• Gene name: LI_gene_188458;
• Additional information: details;

Expression of Ll_transcript_399357

FPKM

• PAB: 0.3
• PNAB: 0.3
• PS1: 0.4
• PS2: 0.7
• PS3: 0.6
• PW1: 1.2
• PW2: 0.5
• PW3: 1.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_399357

• Blastp: Disease resistance protein RML1A from Arabidopsis with 36.88% of identity
• Blastx: TMV resistance protein N from Nicotiana with 39.79% of identity
• Eggnog: NB-ARC domain(ENOG410ZQRA)
• Kegg: Link to kegg annotations (AT1G64070)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019446056.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;