| Id Trinity | TRINITY_DN51903_c4_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_399349 |
| Sequence | TTTATCATCTTATCGTCTTGTCATTTTATTATTTGAGCTTATTATTTTTGTCGTGTGTAACAACCTACTTATATAATAAACTGTTTGGGATTAACTCAAA TTGAGTTTGACCAACCTTTACCATTTATCATATACTTCTATATTTGAAAGTTCACTTTTGGAGGGGGAATAATGAAGAAAAAAAGTTTCAAAACCATTTG TTTTTCATTGCTTAGAAGCTTTTTCTTCCTTCATTTTTTCTCCAAAACCTAATTCACAAATGGGTCTTAGCCTATGTTTGGTAATATTGTTTTGGAGGAA AAATAAATTATGACTTTATAAAGTGATTCCCGACCGCAACCGCAGGGAAATGCTTTGACAGTTTTATCCTTCTAAAACCTTTCACATATTTGTTTATCTA ATTTGAGTGTTTTTCTGTGGAGAGAAAAATGTAAAATTAGTTAACCATCTTTAGTAAAATTTTATGATTATATTATTGATATTTCGTTGTTTATTGGATG GTTAAAGGATAGACTAAGACATTATAATCGTATTATCATTATTTTCATTCAATCTAAATTTCATAATCCTAAACAAGAGAGTCGTTTAACTTTTTTGCCT TTTTTTACATTCTCTTCCTCGTCTATTTTTACCTCTTGATCTCTCTCATTCTCTTTCCCACTTAATTCTTACACACTGTTTTAGAGTAAAAAATCTACAT AATTCTTGACATATAGTTTCAAATGCCACGTGTTATGCCTATCTTTTAGTGCATTTCGAATTCACATTGAAATGTTAGAAAGTTGATGATAAAATTTGTG ATTGAAGATCACATATTTGTATTTTTTTTCCTTTGGCAAGTGTTTTAGGGATGAAGCAAAACTCATTGAAGAGATTGTGAGAGATGTTTTGTGTAAATTG AGAAGTAGGTATCCACAAGGGGGATCAAACCATCTTTTTGGTATCAATGAAAATCTTGTTCCTATTGAATCATCATTTAGAGATTTTAGAACCATTGGAA TTTGGAGCATGGGTGGCATGGGTAAAACAACCATTGCTAGATGGCTATTTAACAAACACTCTTCTGAATTTGATGGTTCCTGCTTTTTGCCAAATACAAG GGAAAGCTCTGGAGATCATGATCAGTTGCTACATGATTTACGAGGTAAACTCGTTTCCAAGCTTCTAGTTGAAGGGATAAAAACCGAGGTGGATACCTAT TTAATTGAGCGCGAACTCCTTCGTCAAAAAGTTATGGTTGTGCTTGATGATGTTAGTAGTTTAAAACAAGTAGAAAGTCTTGTTGGAAAACTAGAACAGT ATGGATTAGGTAGTAGAATCATCATAACAACCAGAGACAAGGATGTGCTGAAAAAAGTAGTGGATAAAATACATGAGGTTAAGGCATTGAACTCTGAAGA CTGCTTTCAACTTTTCTGCTTGAAAGCCTTCAACCAAAACCATCCTAAGATGGGGTATGAAGATTTGTCAAAACTGGCAGTTGATTATGCCAAAAGCATG CCATTAGCTTTAGAGGTTTTAGGTTCTTTTCTTTACGACAAAGCCGTAGAAGAATGGGAAAGTGAACTGAAAAAACTGGAATGTATTCCCAATGAAGCAA TTCAAAGTGTGTTAAAATTGAGTTATGATGGATTAGATGATAACCAGAAGGAAATATTTCTAGAGATTGCAATCTTTTTGAGGGGACATAAAAAAAGAAA TGTCCTGAACCTATTAGTCAGCTATGGTCTCCATGCAGTTATTGGCCTAAGAACCCTCCAGGACAAAGCTCTTATAACTATAAGGGAAGGTGTGGTAGGG ATGCATGACTTGATACAACACATGGGCCATGAAATTGTTCGTCGAGAATCTATCGATGAACCTGGAAGACGAAGCCGATTGTGGGATCCTGAGCAAATAT ACGACGTCCTGAAAGAAAAAAGCGTAAGAGAGAGCCACTAATTTTTCTAACTAAAATGTGTTGAGTAGAAAATACATGTATTACAATAGTGATTAATTAC TTTTATTTGTTATTTTTTGTTTAGCAGGGGACTAATGCAGTTAAAGGCATACTTTTAGATATGTCTGCAATTAGAGATTTAGACTTGAAGGTTGGCACAT TCAGAAAAATGAAAAATCTAAGATTTCTTAGTTTTTATTTGTCATGTAAAACTGGATATAGTACTCTGAGGCTTCCTTTAGGTCTTCACCTATTTTCTGA TAAATTAAGTTACATTCAGTGGGATAGATACCCTTCAAAGTCTTTTCCATTGAAGTTTTGTCCAAAGAAACTTGCCATGCTTTTAATGCCTGAAAGCTGC TTACGAAAACTTTGGGATGAAGTGAAGGATCTTCAAAATTTAAAGATAATAGACCTTAATGGGTCTAGACGGTTGAAGGAGCTCCCAGATTTTTCTTTGG CGTTAAATCTTGAAGAGATAGTTCTCACCGGTTGTGAAAGGTTGTGTCGTATTCATTCATCTATTTTTTCTCTCCACTCACTTGTTGTTTTGAATTTAGA TGGGTGCAAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_188458; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_399349
| Blastp | TMV resistance protein N from Nicotiana with 42.09% of identity |
|---|---|
| Blastx | Putative disease resistance protein At4g11170 from Arabidopsis with 35.12% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019446055.1) |
| Pfam | NB-ARC domain (PF00931.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |