| Id Trinity | TRINITY_DN51903_c4_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_399351 |
| Sequence | CTGCAGGACTTTCACAGTCTCTTGAGTATTTTATGTAAACTTTTTTTTTTAACTCACCGTGAATATTTTAACACAAATACATACATATTTTTTTTTGTGT ATTTTATGCCATCCTTAAAATGCTTAGATATAAGTGAAAGCAACCTTGAATGTTTTCCTGCAAGCATCAAGAAACCTAAAGATCTTGAAGAACTTTACTT AGTTAATTGCAGGAAACTTCAAGCGTTCAATCTCTGCCCGAGCTTCCACAATCCATTGAAGAACTTGACTTATATTATTGCAAGAAGCTTCAGTCACTTA TGGATAGATATGTTCTCTCTTTTGCCGCGATTGGCAGATATGTTCACTTGCAACTCATCATTTATATTCGCGATATTTGAATACTCGTATGCTGAGCCTC TACCTGATGTCAGAATCAAAGAGTGGAATATAGCCAATTTATGCCTCTGAAGTGGAGTTTTATGTCAGAATCAAAGGGAAGCTATGCCTACACATTTTTG ACCATGAAAGGAAAAAGGGAAAAAGAGTGTGACCTTCTGTTATGGTGCTTACATCTTACAGGGCAATTTCTAGTTATCTCTCTCACAGGGATGTAGGTGC TAAACTCATTTATAACTGATGATGTGCTTATAGTATGGCCATGGGGCTCATAATTGGAGACAAAGGAGATTCAGCGCCATGTGGTAATCCGACATTGAAG GTAATTTATGTCAAGTAATATCGATGAATATATTAAGATTGTAAGTTTCTCAATGGCCTGGAATGTCATATACTCATATATCAGTTTCAGTTTTAATAAA ATGGCATGGTTCTGAAATGGGTTGGGAAAGTATCATAATTGGCATTAGTGGTGATGTGTTGGTTGGAAATCATACTATTTCAACTACATTATTAATAATA GAGTATACTCCACTAAGATGGCTTGATAGTGATTGTGGAACTACTGTTATTCCCAATCCTGATGTCAAAAGAAGCATGCATATTCAACCCAATTATCCTG GACATAACTAAAATAGAGTTAAGAAAATATGATCTGATACACAATATTAAAAGTGGAAAATGATCTAAAATTTACGATGAAGGAAACAACCAAGAGTAAA AGTAGATCACTAAGTAGCAAAATGTTAAAATCTCTATAATACAAGCAAAGAATAATCACACCCTCTCTTAAGATAGGATAATACATCTCTGTATATCAAA TATAATAAACACTAAGAAGACACTATAAATATTTTACACCAACAATAAGTTTTTATAAGATTTTCACAATGTAATGAAGGGTCTAAGAAACTTTCAAGTG CTCCATTTATTGCAACAGGACATTCAAAAAAGCCAATAAGTGGCTTTACAGTCACTTGCTTTTCTCATAGTAACCACATGCCTCTGAATCATAAGTTTAT AGTACAGTAAACCTATGTATAGAACAGTTTACATTTTAATTACCATTGATGCACCACAATTGAAATTTGTGTTATATGGGGCCAAAACTTCTAGGAAATT TCGTGGAAAGAAAAACAAGACTTACACGTTGGGTTTAGGAGCTATATATATTACATGGCTTCTTCTTCTACTTTCACAACAATACATTGATCATCATTAT TATATGGCTTCCTCTTCTCCTTCAAATGCATTTCACGTTCCCAAAAAGTACGATGTTTTTATCAGTTTTAGAGGCGAAGACACACGCGGTAACTTCGTAA GTCATCTCTTATCTTCTCTAGAGCGTCAAAAACGGACACATGTATTCATAGATTACAAGCTCCAACTAGGAAGTGAAATCTCAGAAGAACTGTTTAAAGC AATTGAGGATTCTGAAATTTCCATCGTTGTCTTCTCGAAAAAGTATGCTTCATCAAGGTGGTGTTTGGATGAGTTAGTTAAGATAATGGAATGCAAGAAG GAGAATGGACATGATGTTATACCTGTCTTCTATCATGTTCTTCCATCCCAAGTGCGCAACCAGAGAGGGAGTTATGAGGTAGCATTCGAAGAACATGCCG GAAAACCTGAAAACTGCACAGATAAGATGACCAAATGGAGAGAAGCCTTGGTTGAAGCTGCTAATTTATCTGGGAAGCACTCTTGCAAAAAAAATGGTGT TTTAGGGATGAAGCAAAACTCATTGAAGAGATTGTGAGAGATGTTTTGTGTAAATTGAGAAGTAGGTATCCACAAGGGGGATCAAACCATCTTTTTGGTA TCAATGAAAATCTTGTTCCTATTGAATCATCATTTAGAGATTTTAGAACCATTGGAATTTGGAGCATGGGTGGCATGGGTAAAACAACCATTGCTAGATG GCTATTTAACAAACACTCTTCTGAATTTGATGGTTCCTGCTTTTTGCCAAATACAAGGGAAAGCTCTGGAGATCATGATCAGTTGCTACATGATTTACGA GGTAAACTCGTTTCCAAGCTTCTAGTTGAAGGGATAAAAACCGAGGTGGATACCTATTTAATTGAGCGCGAACTCCTTCGTCAAAAAGTTATGGTTGTGC TTGATGATGTTAGTAGTTTAAAACAAGTAGAAAGTCTTGTTGGAAAACTAGAACAGTATGGATTAGGTAGTAGAATCATCATAACAACCAGAGACAAGGA TGTGCTGAAAAAAGTAGTGGATAAAATACATGAGGTTAAGGCATTGAACTCTGAAGACTGCTTTCAACTTTTCTGCTTGAAAGCCTTCAACCAAAACCAT CCTAAGATGGGGTATGAAGATTTGTCAAAACTGGCAGTTGATTATGCCAAAAGCATGCCATTAGCTTTAGAGGTTTTAGGTTCTTTTCTTTACGACAAAG CCGTAGAAGAATGGGAAAGTGAACTGAAAAAACTGGAATGTATTCCCAATGAAGCAATTCAAAGTGTGTTAAAATTGAGTTATGATGGATTAGATGATAA CCAGAAGGAAATATTTCTAGAGATTGCAATCTTTTTGAGGGGACATAAAAAAAGAAATGTCCTGAACCTATTAGTCAGCTATGGTCTCCATGCAGTTATT GGCCTAAGAACCCTCCAGGACAAAGCTCTTATAACTATAAGGGAAGGTGTGGTAGGGATGCATGACTTGATACAACACATGGGCCATGAAATTGTTCGTC GAGAATCTATCGATGAACCTGGAAGACGAAGCCGATTGTGGGATCCTGAGCAAATATACGACGTCCTGAAAGAAAAAAGCGGGACTAATGCAGTTAAAGG CATACTTTTAGATATGTCTGCAATTAGAGATTTAGACTTGAAGGTTGGCACATTCAGAAAAATGAAAAATCTAAGATTTCTTAGTTTTTATTTGTCATGT AAAACTGGATATAGTACTCTGAGGCTTCCTTTAGGTCTTCACCTATTTTCTGATAAATTAAGTTACATTCAGTGGGATAGATACCCTTCAAAGTCTTTTC CATTGAAGTTTTGTCCAAAGAAACTTGCCATGCTTTTAATGCCTGAAAGCTGCTTACGAAAACTTTGGGATGAAGTGAAGGATCTTCAAAATTTAAAGAT AATAGACCTTAATGGGTCTAGACGGTTGAAGGAGCTCCCAGATTTTTCTTTGGCGTTAAATCTTGAAGAGATAGTTCTCACCGGTTGTGAAAGGTTGTGT CGTATTCATTCATCTATTTTTTCTCTCCACTCACTTGTTGTTTTGAATTTAGATGGGTGCAAAAAATTGAAGAGGCTTGAAGGTGAGAATCTTTCTGAGG TTCTAAATCTTGACCTACCATCCTTAGAACACTTATCACTAAGTAGAAGCAATATTGAGTCTTTGCCTGCAAGCATCAAGCAATGTACAAAGCTGATAGA TCTTGGCTTAGAAGATTGCAAGAAGCTTCAATATCTGCCTGAGCTTCCACAATCCATTCAGGATTTATATCTTGGTCGAAGCAATATCGAGCGTTTGCCA ACAAGCATCAAGCAACTTCCGAAACTGACAAAACTTTTCTTGACTGATTGCAAGAAGCTTCAGTCTCTGCCCCTGGAGCTTCCACAATTTATTAAGGAGT TAGCTCTAAGTGGAAGCAATATTGAGAGTTTGCCACCAAGCCTCATGCAACTTGAAAAGTTGACAAATCTTTACTTACAGGATTGCGACAAACTTAAGTC TTTGCCAGAGCTTCCAAAATCCATTGAGCTATTAGATCTAAGTGGAACCAATAATGTGAGTTTGCCACCAAGCCTCACACAACTTGAAAAGTTGACAAAT CT BLAST |
| Tissue | pods |
| Gene name | LI_gene_188458; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_399351
| Blastp | Disease resistance protein RML1A from Arabidopsis with 35.05% of identity |
|---|---|
| Blastx | TMV resistance protein N from Nicotiana with 34.78% of identity |
| Eggnog | NB-ARC domain(ENOG410ZQRA) |
| Kegg | Link to kegg annotations (AT1G64070) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019446056.1) |
| Pfam | NB-ARC domain (PF00931.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |