Id Trinity | TRINITY_DN51903_c4_g2_i1 |
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Name Transcript | Ll_transcript_399348 |
Sequence | GTTTTGTTCTGTCTAATATATTTTGTGGATAGGAGTACCACTTGTTCTCCTAAATTCTGTTTTCATTATAAATTGCTGATAAAAAAACACCTTCTAATTT CATAGATTCTTTCCTCATATGTTACATTATTTCCTCATAAATGTAACTAGATACGTATACATTTCAACAATCATTATAAGAGAACAGAAGTAACACTGAA AACATTACATCACACTTTGAGATATTTGTTGAATCTATGGCTTCATGGAATTCAGTTCCACTTCATGTCTCCTATGAAGTTCTGGGTTGGGTTGCTTTTG TTTCCTGGTCCATCAGTTTTTATCCACAAGTTATCTTGAACTTTAGAAGAAAAAGATGATACCGGTGGCACCGAATGATGTTGCTTTCTCATGCCATGCT GTTCTGCTTACAGCAATTTCATTGTTCCAGATTGCAATATATGATCGTGGAAATCAAAAAGTCTCTAAAATCGCCTTCGCAATCGTCATTGTGGCGTGGT TGACTGCAGCAGTGTGTTTCTTTGTAACATTGCACAATCATCATTGGCTCTGGCTACTTAATATTTTCAGTGGCATCCAAGTTTGTATGACAATTATTAA ATATATTCCCCAGGCAGTGATGAACTTTATGAGAAAAAGTACAAGTGGATGGAGCATTGGAAACATTCTACTTGATTTCTCTGGAGGAATTGCAAACTAT TTACAAATGGTTATGCAATCAATAGATCAAGGTTCTTGGGTGAACTTCTATGGAAATATAGGGAAACTGCTACTATCCCTGGTGTCTGTATTCTTTGATA TCCTCTTCATGTGTCAACATTATCTACTATATCCCACAAAGAAACACAACTCGGAGACATCACCAAGACCTAATAATGCCAAGTCATCATCTGGGAATGT TTAACATGTAACTTGGTTCACAAGTCATTAGTTTGAGTATGGTCTGAGAATGTTTAATACATTACATTTTCGATTTGCCTATAAAAATGATGGAACATGA TACAATATAATGATACTATGTCATGTAAGTAAAATGTTTTGTCTTTTGTTGTTCTGTATATGCTATCAAACAAAACTATTGAAGCTTATGTTTTGACATG CTTACTTAAAATTACTCCGAAATAGTGTAGTATTATCAACCAGTGGGTAAGGT BLAST |
Tissue | pods |
Gene name | LI_gene_188459; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_399348
Blastp | Cystinosin homolog from Arabidopsis with 68.75% of identity |
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Blastx | Cystinosin homolog from Arabidopsis with 68.16% of identity |
Eggnog | cystinosin(ENOG410XQSD) |
Kegg | Link to kegg annotations (AT5G40670) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019458854.1) |
Pfam | PQ loop repeat (PF04193.13) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |