Ll_transcript_400024

• Id Trinity: TRINITY_DN51904_c0_g2_i10
• Name Transcript: Ll_transcript_400024
• Sequence: AAAAAATGCAGTGGGATAGGATAGAGAATGGAAAATGATATATCCTCCTATTAAATCTAAATTCTCTTACCCACTTAAAAGTGTGATACTTTATTTAGTA ATAATTGACAACATATAAGTAATATGTGTTACTCTTTTATGGATAAAAGGATTAATGTGAGAATATAACTTTACTCGATGAAGGATAAGAATAAGAATGG CAATAAAACAAAAAAAGGCGTGTACAGGGAGTGGGAAATGCAGTGAACTCTTCTGGCACTTCCCTTTTTATAGAATTTTCTGTTTTAACTCTCATCACTA TCATTTTCATTTTCATTTTCATTTTCATTTTCTTCTCTTCTATCACATCAAATCTCAAACCACTTTCTATAAAATAGAATAAGAGATCCATAACGCATTT ATGCTTACGTTTTCAGCTACTCACCTCACTTCATTCAATAATTTAAATCTATATAAATCAAATGAATATCATTTTTTAATTTTATTATTCTTTTACCACA TTTACTGAGCCAAATGGCATTTCAACGGCGGCGCCACCACTATTTACAACGCTTCCGCCTAATGCTTCCGTTAATCTCCGCCGTCGCCGGTGCTCTACTC TGTCTCTTTGCTCTCCTTTCCATTTTAGCTCCTTCTCCCGTCGAAACTGATCATATCCACCACCGACGTAGCCACTCTCAGATTAACGTTCATACGGATG ATGATGCGATTCGAAAACCTGAGTTCCGCGTTCCGAGCGGTGGAGGAAAGTTGGATCGTGATGTGTGGACTTCTAGAAATTCTGAGCATTTCTACGGATG CAGCAATTCAAGCAGCAAGTTTCAAAAAGCTCAAGTCGTTACAAAACCGGATCGGTATTTGCTGATTGCAACAAGTGGAGGCTTGAATCAACAAAGAACT GGGGTAATTCTTGAACGTCTGTTATTATTTATATATTTCTAGTGCTCATTTGATGGCAAGATAGGATAAGAAGATGATAAGGTATAGAGCAAGATAAAAA TATGAGTAGGATGAGATCTCTCTCTGTCCCTTGTTAAGTGCGCACCAGATAAATGACATTGAGACGGTAGTTTTAGTGGTGTGGTATGATGGGAAAATCT GCACTATCCTATCTCCCAGCTCCTCACATGGGATAGACAATATACTAGGTGAACATGATAGCCCTATCTAGTTAATAAAATGTTTAATGAATTGAAAAGG AAAAATAATTGCACATGCTTCCTGAATCGTGTTGAGCCATAAAACGAGGTTGTCTAATAAAATGAACTTGTTCTTGTAGTCGTAAGTGACAGTATTCAAC TGAGAAAGGAGCTAAACATACACATATATCGAATGAAGGACACACACAATATGATCTAGGTACATTGAAATGGAAAAAAATAATCAAATAATCGGAGATA TGTTGATGAAAAAAGCCTGGTAATTTAATAATTTTAAAGTATTGGTGCTACATATTAGTCTGTTGCTCATGGTCATGAATACCTTGACACTTATTTAAAA CCTCTGTCTTCTTAAAAGGCTTTGTTTTCATTTGAAATTTTGGAACAATTAAAATGACAAAGGATGCACATTTATTGTATATGTTTCTGGATGACAACTG CAACTAATAAATTATATATATTTTTTCTTATCTTTATCTTTTGTGATACTGAAATCATCTTGACAAATATTTCATGCATGATGCATCTATGGATTAAAAG TAGCCCTTACTTTTGTGGTTTTTACCTGCCTGGCTTTAATAAAAAATGGTCTCAATAAACTGTTTGCTGCAAAAGGAGGAGTACAGAAACCTGTAAAAAA AGTTTAGTTACCCCACTAAGTGGGACCTTTGTGCATGGGCCACCCTTTTATTATAGTTTCTATCTGTATATGATGCTTACTGATTGCAAACTATTTACAT ACTTAGCTGTCAGTGCCAATCATTCTGTTTCTGAAACTGCCAGATTGTAGACGCTGTTGTTGTTGCACGAATTTTGAATGCTACTCTTGTTGTTCCGAAA TTGGATCAACGATCTTTCTGGAAAGATTCAAGTAACTTCTCAGAGATCTTTGATGTTGATTGGTTTATATCCTATCTTTCAAAAGATGTCAAAGTTATCA AGCAGCTCCCACCACGCAAGGGTGGGAAAATGTTATCTGCACACTCCATGCGTGTTCCAAGGAAGTGTAATGAAAGGTGTTATATAAATCGCATATTACC CGTGCTCCTGAAAAAACGTGCTGTTCAGCTCAACAAGTTTGATTACAGGCTCGCAAACAGGTTGAAGACTGAGTATCAGAAGATGAGATGTAGAGTTAAT TACCATGCTTTAAAATTTACCAACCCGATACGTGAGATGGGTGAGAAATTGGTTCATCAGATGAGGATGAGAAGCAAGCATTATATTGCACTGCACCTGA GATTTGAATCTGATATGCTTGCATTCTCTGGATGTTATTATGGCGGAGGAGAGAAGGAGAAGAAAGAATTGGGCGCAATAAGGAGGAGGTGGAAGACACT TCGTAAAAGCAATCCTGATAAAGCAAGGAGGCAGGGAAGATGCCCATTAACCCCAGAAGAAGTTGGTCTCATGCTGAGAGCATTGGGATATGGTTCTGAT GTTCATATTTACGTTGCATCGGGGGAAGTATATGGAGGGGAAGAAACATTGGCACCTCTAAAAGCATTATTTCCAAACTTCCATTCTAAAGAGACCATTG CAACCAATGAAGAACTAGAACCATTTTCTTCATTTTCTTCTCGCATGGCTGCTCTTGACTTCATTGTTTGTGATGAAAGTGATGTATTTGTGACCAATAA CAATGGTAATATGGCTAAAATATTAGCCGGGCGAAGGAGGTACTTCGGGCACAAACCAACCATTCGTCCAAATGGTAAAAAACTCTATCGATTGTTCTTA GGCAGAAGTAATTTGACTTGGGAAGTTTTCGCTTCTGGTGTCCGCACTTTCCAGAAAGGCTTCATAGGGGAGCCAAAGGAGCTTAGACCAGGTAGAGGTG GGTTTCATGAGAATCCATCTACCTGCATATGTGAAGATTCAGTGGCCAAAGTGGACAAACATTCTGGATCTAGAAAAATTGGAAAGGATAATGTAACCAA GAAAAATGTAGCAAATGATGACCTGGATGTTGATGATGAGTTTGAAGAGCCGGGCATGGATGATGATGAAGATCCAAATGATCTAGTAGAGAGGAGTATG TCCAATGAAACAATTTCGGACTACGAAAATCTGAACTTTGAGGAACCTGAACTGGATGAATTTCCATCAGACTAGTTAAGCTGCCCCGTTCTGGCTATCC ATTATAATACTTTGCCCTTATTGCACCTTCTTGAGCAGCTGCTGTGCATTTTGAAACGTGTTGCTTGTACTCATACTCAGGAAACAGCAGAAAACAAAAA AAGTCTCTTGATGCTAGATGAACTTCAAGTGGCTACAGTAAGAAGACATCTCGAAATTTTAATTGCCAGAATATCCTTGTGCATTTCTAAGGACATAATG AATGGTTTCAGTTCAAAAAAGGGGTAATTGGACTTGTAATTGAATACCTAAAGAGGTGATCAAAAGTGAGCAATGGGAGTGGGTTGGAGGACTATTCAAC GTATTGCTTCAATCAAAGTTGAGTTTACTAATCGATTATAGAAGTAGTAGGAATACCAATAACTGTATAATTTTATTCAGAAAATTGTAGTTACTAACTT TTGAAACTGATTTTCACTTTTAGAAGCAACAGGATGGTAACTTAAGTTTTTGTGTCTAAAGGTTACATAGCAATAGTAATGGAAAAATGTTGATTAATTC TACAGGTAGTACAATGGTTGTAGATCTAATAACTATTTCAAAAATCATATGCACATGTTTGTGTGCTCGAGACTTTTGACCTTTTTTCACAAACTGTATG TGTTCATCTGTATGTTATAAATTGCTGCTATCAGTAAAGCAGCTACAATTAAATGGATAGGTTCACTCTATATGCTTCTTGTCTCCATATACCTATCAGG AATGTTTTGTCACGCAACATGATCTCATGAAGAT
• Tissue: pods
• Gene name: LI_gene_188472;
• Additional information: details;

Expression of Ll_transcript_400024

FPKM

• PAB: 3.1
• PNAB: 3
• PS1: 4.7
• PS2: 0
• PS3: 4.2
• PW1: 0
• PW2: 4
• PW3: 2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_400024

• Blastp: Uncharacterized protein At1g04910 from Arabidopsis with 36.16% of identity
• Blastx: Uncharacterized protein At1g04910 from Arabidopsis with 38.61% of identity
• Eggnog: DUF246 domain-containing protein(ENOG410Z25U)
• Kegg: Link to kegg annotations (AT1G04910)
• CantataDB: Link to cantataDB annotations (CNT0002173)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019438094.1)
• Pfam: GDP-fucose protein O-fucosyltransferase (PF10250.8)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;