| Id Trinity | TRINITY_DN51904_c0_g2_i18 |
|---|---|
| Name Transcript | Ll_transcript_400036 |
| Sequence | AAAAAATGCAGTGGGATAGGATAGAGAATGGAAAATGATATATCCTCCTATTAAATCTAAATTCTCTTACCCACTTAAAAGTGTGATACTTTATTTAGTA ATAATTGACAACATATAAGTAATATGTGTTACTCTTTTATGGATAAAAGGATTAATGTGAGAATATAACTTTACTCGATGAAGGATAAGAATAAGAATGG CAATAAAACAAAAAAAGGCGTGTACAGGGAGTGGGAAATGCAGTGAACTCTTCTGGCACTTCCCTTTTTATAGAATTTTCTGTTTTAACTCTCATCACTA TCATTTTCATTTTCATTTTCATTTTCATTTTCATTTTCATTTTCTTCTCTTCTATCACATCAAATCTCAAACCACTTTCTATAAAATAGAATAAGAGATC CATAACGCATTTATGCTTACGTTTTCAGCTACTCACCTCACTTCATTCAATAATTTAAATCTATATAAATCAAATGAATATCATTTTTTAATTTTATTAT TCTTTTACCACATTTACTGAGCCAAATGGCATTTCAACGGCGGCGCCACCACTATTTACAACGCTTCCGCCTAATGCTTCCGTTAATCTCCGCCGTCGCC GGTGCTCTACTCTGTCTCTTTGCTCTCCTTTCCATTTTAGCTCCTTCTCCCGTCGAAACTGATCATATCCACCACCGACGTAGCCACTCTCAGATTAACG TTCATACGGATGATGATGCGATTCGAAAACCTGAGTTCCGCGTTCCGAGCGGTGGAGGAAAGTTGGATCGTGATGTGTGGACTTCTAGAAATTCTGAGCA TTTCTACGGATGCAGCAATTCAAGCAGCAAGTTTCAAAAAGCTCAAGTCGTTACAAAACCGGATCGGTATTTGCTGATTGCAACAAGTGGAGGCTTGAAT CAACAAAGAACTGGGATTGTAGACGCTGTTGTTGTTGCACGAATTTTGAATGCTACTCTTGTTGTTCCGAAATTGGATCAACGATCTTTCTGGAAAGATT CAAGTAACTTCTCAGAGATCTTTGATGTTGATTGGTTTATATCCTATCTTTCAAAAGATGTCAAAGTTATCAAGCAGCTCCCACCACGCAAGGGTGGGAA AATGTTATCTGCACACTCCATGCGTGTTCCAAGGAAGTGTAATGAAAGGTGTTATATAAATCGCATATTACCCGTGCTCCTGAAAAAACGTGCTGTTCAG CTCAACAAGTTTGATTACAGGCTCGCAAACAGGTTGAAGACTGAGTATCAGAAGATGAGATGTAGAGTTAATTACCATGCTTTAAAATTTACCAACCCGA TACGTGAGATGGGTGAGAAATTGGTTCATCAGATGAGGATGAGAAGCAAGCATTATATTGCACTGCACCTGAGATTTGAATCTGATATGCTTGCATTCTC TGGATGTTATTATGGCGGAGGAGAGAAGGAGAAGAAAGAATTGGGCGCAATAAGGAGGAGGTGGAAGACACTTCGTGTAAGGCTCACATGTTAAATTTAT TACTGACCATGATTATTAGGAGATGTTGTAAGTGTAAACTGGTTGTTTTCATAGAATGAGTTACTGACTTTGGCACTATACATTTGAACAATATCTCACC ATATTAGTAGCAAGACTCTAAGGAAATAGGCATAGGTAGTGGAGAATGACTTTGCCTAAACACGTATATAAAAACTGAGTATATTGTCATGGATATTGAT ATGCAGAAAAGCAATCCTGATAAAGCAAGGAGGCAGGGAAGATGCCCATTAACCCCAGAAGAAGTTGGTCTCATGCTGAGAGCATTGGGATATGGTTCTG ATGTTCATATTTACGTTGCATCGGGGGAAGTATATGGAGGGGAAGAAACATTGGCACCTCTAAAAGCATTATTTCCAAACTTCCATTCTAAAGAGACCAT TGCAACCAATGAAGAACTAGAACCATTTTCTTCATTTTCTTCTCGCATGGCTGCTCTTGACTTCATTGTTTGTGATGAAAGTGATGTATTTGTGACCAAT AACAATGGTAATATGGCTAAAATATTAGCCGGGCGAAGGAGGTACTTCGGGCACAAACCAACCATTCGTCCAAATGGTAAAAAACTCTATCGATTGTTCT BLAST |
| Tissue | pods |
| Gene name | LI_gene_188472; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_400036
| Blastp | Uncharacterized protein At1g04910 from Arabidopsis with 39.59% of identity |
|---|---|
| Blastx | Uncharacterized protein At1g04910 from Arabidopsis with 40.61% of identity |
| Eggnog | DUF246 domain-containing protein(ENOG410Z25U) |
| Kegg | Link to kegg annotations (AT1G04910) |
| CantataDB | Link to cantataDB annotations (CNT0002173) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019438093.1) |
| Pfam | GDP-fucose protein O-fucosyltransferase (PF10250.8) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |