Ll_transcript_400039

• Id Trinity: TRINITY_DN51904_c0_g2_i20
• Name Transcript: Ll_transcript_400039
• Sequence: TAAGTATGCCCTCCCTCCATTCCCCTTCCACATAGAGTGATTGCTTGCTTAAAGGAATAGTAGATTGTGTGAGACAATTCAATTAAGTACTAGGTCTAAG ATACCATGGTGATGGAAAGAGGAAAAGGATGATAATAATAATATTGTTGGAGTGTGAAATCCAAGAATGACAAAAGAGCCACTGAACCTGCCATCACGTA ACACATACGTTTTCCTACTCATTTTCTATTCTGTTGGTGTTCCATCATCATAATAATAATAACAATAATAATACCTCAAACTGAATCAGAAACAGATCAA CACGCATTCCCCTGTAACCACCTTCACTTTATTCTGCTTTCTTAATTCATTCTATTTTTATTGAGAGAACTCTCACACATGCAATGCGTGCCGCTTTTAC AAGTTACAACTGCTCAATAATTTCAACTTTCTCTTCTCTCATCAAAAAGCGCGGTGTGGTCCATGGCACTTCAGCGGCGGCGCCACCACCATTGCCACCA ACGCTTCCGCCTTATGGCTCCGGTCATTTCCGGAATCGCTGCCGCTCTACTGGTTCTATTCTCTCTCCTTTCTTTATTAGCTCCTTCTCCAAACGACACT GTTTATCTTCACTCTCACTCTTCGTTTAATGTTGAAAAGAGTGATGCAGTTCGAACTCCAGTGTTCCTAGTTCCGAGCAGTGGAGGAAAGTCGGATCGGC ATGTTTGGAGTTCGAGAAACGCTGAGCATTTCCATGGCTGCAGTGATGCCAACAACAAGTTTCTAAAAGCTGAAGCCATTACAAAATCTAATCGATATTT GGGGATTGCAACAAGTGGAGGATTGAATCAACAGAGAACTGGGATTACAGATGCTGTTGTTGCGGCACGCATCCTGAATGCTACTCTTGTTGTTCCAAAG TTGGATCAAAAATCTTTCTGGAAAGATTCCAGTAACTTCTCAGAGATCTTTGATGTTGATTGGTTTATCTCCTATCTTTCAAAAGATGTCAAAATCATCA AGCAACTCCCAAGAAAGGGTGGGAAAACATTATCTGCATACTCCATGCGTGTTCCAAGGAAGTGTAATGAAAGGTGCTACATAAATCGTATATTACCTGT ACTCATGAAAAAGCATTCATCTCCATCCCTTAGTTTGATTGTTATTCATTGCTTGGAAGATGTCACACTCAAATCTACCTCACACTGATTAGCTTGATTA ACTCCTCACCTCCTGATCTTATCAATCTAACTGACTTGTTCATAGCGAATATGGAAATTTTGTTTTGTTCTGTGCTGTGCAATTTCAAACACCGTCAACA CAATAGGAGACAAAGACTCCAGGATTAATTTGGTCTAATTTTGATGCAGGCTGTCTTTATGGGAAATAACTAGGCCCTAATATGTTACTTCTCTTCATTT GTAATTCTTGTTGTATCCTGAAACTCTGCCTATGCCATACTCTTTCGTCAAACTTTACTCAGTAGGTCCTTAAGGGCCTGTTTGCAAGTTCAATTTTGAA GGGAAAAGAATGGAAATGGCAGGTTTGGGAGCCATGAAATACGCTTGTGATATGAATTTGAAGCCTTCTCTTTCCCTTCTCCCCCCTCCAAAACTTAACT CGCATGCGGGCCATAAAGGGGAGGGTTTTATTAAGTAGTTGGTAACCTACATATAAGTTGTCTTTTATGACATTGATCTATGACACAATTGAAGAGGATC AAATAAAGGCTCCAATGAGAAAGATGGGTCAAATGGAATAGAGTCCGATTAAAAGGGGTAGAAGAAGGCCTAAGTAAATATTAGGAGAAACTTGTAAAAA TAGACCTCACTCAAAATGGTTTTACTATAAAAATTGGTTTTTGATTTACTTCAGCTGGTTGCTATGTCTTGGTTGTCTGGTGCCTTAAAACCTCGTGTGT TTTATGCCTAAAGTACCATTTCAGTTTAAAGTATTATCTAAGTCCTTTCTGCCAATCAGACCATCTTTAGCATTGTTTGCAAGATGTACAACCTTGTTTT CACCCTTGCTTGAGTTTGACTCAACAATTTCAGACTATGCAGATACAGTTGAATCTGCCTAAAGAGTCACGATACGAATCTATGCGGAATAAGATTACAT TACATTCATTAGATCTTCAAACCTAGTAGTTCCCAAATTTGAATTACCCTATGTTTATCCTAGTAAAACAGCAGTAGCAGCAAAAGCTTTTTTTTCCCAA TAATTTGGGGCTAGACAAATTGCCTAAAGTTTCAAAATTTAGTATATATTATCCTTTTCTCGATTTTTTTGAGTGATCTTTGTTTAACCAAAATGGGATG TGTTGCACGCTTGAAACTTACAGAAAATTGAGAAAATTCATGAATATATGAGAGCAATAGTCATAACCGTGTCTTTTATTGCTATAATAATCCCAGTTCT TTTGGATGGAACACATTTTTTATAACTTACTAAACTTCTCTACCATTTTGCATTTCTTCACCCTTAAAGAATTATTTGAATATTGAAGTTTAGATCTGTT TATATTGTACGAAACTAAAGTAATTTATGTGTAAATATGCAATTAATATTTAAAGTTGTGATGAAAAAATTATCAGCACAATATATGGATAATTGTTTGA ATAATCATCCATGAAAAATATTTAGTTAACTTCATATTGTGGCAGGCTGTTCAGCTCAACAAGTTTGACTACAGGCTTGCAAACAGGTTGGACACAGAGT ATCAGAAGCTGAGATGTAGAGTTAACTACCACGCGTTAAGATTTACGAATTCAATACTTGCAATGGGTAAAAAATTGGTCAATCGAATGAGGATGAATAG CAAACATTATATTGCACTGCACCTGAGATTTGAACCTGATATGCTTGCATTTTCTGGATGTGATTATGGTGGTGGAGAGAAGGAGCAGAAGGAACTAGGC GCAATAAGGAGGAGGTGGAAGACACTACATAGAAGCAATCCTGATAAGGCAAGGAGACAGGGAAAATGCCCATTAACCCCAGAAGAAGTTGGTCTCATGC TAAGAGCATTGGGATATGGTTCTGATGTTCATATATATGTTGCATCAGGGGAAGTATATGGAGGGGAAGAAACGTTGGCACCTCTCAAAGCGTTTTTTCC TAACTTCCATTCAAAATATACTATTGCCACCAAAGAAGAATTAGAACCTTTCTCTAAATTTTCTTCTCGCATGGCTGCTCTTGACTTCATTGTCTGTGAT GAAAGTGATGTATTTGTAACAAATAACAATGGTAATATGGCTAAAATATTAGCTGGGAGAAGGAGATACTTTGGGCATAAACCAACCATTCGTCCAAATG CTAAAAAACTCTATCGATTGTTCTTGAGCCGAAGCAATTTGACTTGGGAAGATTTTGCTTCCAGTGTCCGCACTTTTCAGAAAGGCTTCATGGGGAAGCC GAAGGAGGTTAGACCAGGTAGGGGTGGGTTTCATGAGAATCCATCTACCTGCATTTGTGAAAAGGCCAAAATTGAGAAAAATTCTTCAGCTATTAAGTAC GAGAAGGATAACGCAACCAAGAAAAGTACAACAAACAATGGCCTGGATGTTGTCGATGATTCTGAATGGCCTGACATTGATGATAATGAAGATCATAGTG ATGAGAAGGGCATGTTCAATGAAACCATTTCCGACTACGACACCATTAACTCTGAGGATAACGAGTTGGAGGAAATTCTTTCAGATTAGCGGAGCTTCCT GATATTGCTCTGTTGTACATGTTGACTCTTTCATTCTGATTCTTTGCCTCCTCATGTTGTCCCCTTGTGCTGAACTCAAACATAGTATATCAAAGAAAAG CAAAAGCACTCGTCTTTGCAGTAATTACAAGAACATATTGTGCATTTCTAAGGACATAATTGCCAGAGTGTTGAAGGGATGTTTGGATGTCTAATTGAAT CTGTAAAGGGTTACAAGATCAGAAATGAGTAGCAACAAATATGAGTGAAGTTGGAGGACAATTTAGCTTGACATATAGCTGCATACAAAATCGATTTTGC TTGTCCTTAATAAGTAGGAAATTTTATACAGTTTATAGGTTGTGTATATCTTTTTTCAGGAAATTTATTATAGGTGATATAAACTTTTATGTCTTTGTTA CTATTGCTAGGTTCATGTATTCAGCTTATTTTTCACTTGGAACAGGATGCACCAAAAGGGTTCTACTCATTTTTCCTTAAGGGAAACGAGGCAATAGTAA TAGAGTAATAATTTAAAACCGTTG
• Tissue: pods
• Gene name: LI_gene_188472;
• Additional information: details;

Expression of Ll_transcript_400039

FPKM

• PAB: 0.6
• PNAB: 1.2
• PS1: 0.9
• PS2: 0.6
• PS3: 0.8
• PW1: 0.1
• PW2: 1.2
• PW3: 0.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_400039

• Blastp: Uncharacterized protein At1g04910 from Arabidopsis with 33.7% of identity
• Blastx: Uncharacterized protein At1g04910 from Arabidopsis with 36.77% of identity
• Eggnog: DUF246 domain-containing protein(ENOG410Z25U)
• Kegg: Link to kegg annotations (AT1G04910)
• CantataDB: Link to cantataDB annotations (CNT0002173)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413239.1)
• Pfam: GDP-fucose protein O-fucosyltransferase (PF10250.8)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;