Ll_transcript_397003

• Id Trinity: TRINITY_DN51907_c0_g1_i2
• Name Transcript: Ll_transcript_397003
• Sequence: TCTCTTTCTTCTTCTTCTTCTTCTATTCACACCACTTCATCTTCATCTTCTTTACTCTTTCTTCATCACCATGTTAGTTCCACAACTTCCAAAGCTGTTC CACCATGCAGACTCACTATTAGAGGTTACATGGATAACTCAAAATCATTTGGAAGTTTTGCAAACAAGGTCATTGGTTCATTACCAGTGGTTGGATTAAT AGCTAGGATACTAAGTGATGAAGGTGGTGTTGGCAATGATATGATTGATTTTGCTGAGTTTAGAAGAAGGGTTGGAAAAAAGTGCACCATTAATGATTCC AGAGCTTTCTATGAATTCAAAGATAGGCGAGGAAAGGTACTCACTTATTTACTTCCAAACCAAATTTTCAATTTTACTCTTGCCTTTAATGTTTCTCAAC AATACTTAAGTTTAATGAAGTTGATTTAGTGCTCAAAATTAAATCTTTATAACCTTAAAATCTGCCAAGGTTGGTAATGGATTGTTTATATCCCACCCCA TAATTGAATTTGAATCTTGGGTTTTCTAGTCAAATTTGGTAAGGTTGATTCATGTTCAAAATTCAATCTTTTGTAACATTAATATTGATGAAGTTTAGTC ATGAATTCTTTAAACCTCAATAACCTTGCAATCTATGAAGGTTAATTCGTTGTTTTTTGTTAGTTTTTGGTTTTCATGTGCTAAAATGGAATGGAATCCA TGGATGAATGTAGTTATATCTGAGTTGGAGTTAGCTTATTGTGTTGTAGCCAGGGGAACCTCTGTATGTTCTATTATGCTGTTGGCTAGCAGCCACTGGT GCTGGTCTTCTCAAAACTGAAGAGATTTTGGAAGGGGTAGCAAGGCTCCGGATCTCGGACGACATTGAATTTGAGGAGCAGACTTTCATTGCCATGATGA ATGAAGCAAGAGAGGTTGGTCCATCTCCCTATGTTTCACTTTGACAAATTTTAATGTATCCAACTTTTAAGGCCATTCAGTTTTAGTAGAGTAAGTTGCA TTTGAAGGGGAACTATATTATATTATTACTTTGCATTAACTTCCTGAGTCATTCTGAAAAATGTGGTCTGAACTTTACATTTAGAAGATAATGTCCATAG CCAAACACTTACTGTCATACAATCACAATACTTGCCTTTCTTGTACAAGTAGTGCAAACAATGGTGCTCTGTGCCTGAGGATTCTCCGAATATTCTAACG GCAAATCACACGCCACAATGGAATTTTCACGGATAATTTTTGTTTCATTATGTTGTGAGAAAGTGCCTATATGTTATCAACAGGATAAGCTTGTGAAGAG GAACAATTCCAATATATATGACATGTTCTTTGCCATGTGTCACTAATGCTCCACATGTATGTTTGATACTTACTGATGCTAAAAGTCTTATCTATGTGCC CTTCCCTGACAAAAAAAAAACATATTCAAACTGTAGAAACGGGCGAAGCTGAAGACTGCACCGCCAACTATACCGATGGAGATTCGAGTCGAAAAGGCTC TGGATGCTATATACGTATGTTGCTTTGAAAAGAACCTCATAGAGGAAGAAGACGAGAGGTTGCTGGTTACAATGCTTAGTGCTGTTTTTCCTTCAGTTCA GCAACAAGAGATGGAGAGGATGGTAAAAGAGAAGGGAGTGAAAATAGCAGCAGGAGTAAGAGATTATGTTGCAGAGGCAAAGCCCTTATCAAAAGAAGCT GTGGAACTACAAATGAAGGACCTTCAGTTCCTCAAACAAAATAGTGAGACATAACATGGTGAAGGCTATGATGTTTTGACACTTAATGTATTCAATGAAT TTATATTACAGAAACTAAGCTGTTTCTATATGGAATACAAGAGCTTTGTGGCATTGATGATGGATACAGTTATATGCCTATTATTGGAGACAAATGTAAC ATTCTTTAATCAAAAAAGTTAGGACAAAGTTCTCTAACATTTTTTAAATACAATGATGGAGTTCATTTTATATTTTGAAAATTTGGAGAAGAGTACAAAA T
• Tissue: pods
• Gene name: LI_gene_188505;
• Additional information: details;

Expression of Ll_transcript_397003

FPKM

• PAB: 1.4
• PNAB: 1.9
• PS1: 0.3
• PS2: 0.8
• PS3: 0.7
• PW1: 0.6
• PW2: 1
• PW3: 1.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_397003

• Blastp: Photosystem I assembly factor PSA3, chloroplastic from Arabidopsis with 58.41% of identity
• Blastx: Photosystem I assembly factor PSA3, chloroplastic from Arabidopsis with 72% of identity
• Eggnog: calcium homeostasis regulator CHoR1(ENOG4111QT7)
• Kegg: Link to kegg annotations (AT3G55250)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019452890.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;