| Id Trinity | TRINITY_DN51912_c1_g1_i19 |
|---|---|
| Name Transcript | Ll_transcript_399036 |
| Sequence | CCTTATCCTATGAATACTCTTAATACTACTAAAATACCTATGTATGAATTTTGTCAAAAAATGGTGTAAGAATTTTACATAATGTTAGTATCTAGATATT ATTGCGTGTAATTTTCTGTTTCTAAAATATACTTTTCTGTTTGTGACTACTTTTCTGTTTCTGAATCTTTCTATAAAGTAAGCTTTATTGGACACCAATC TCTCAAAAACCTCTTCTTGTTCTTCTTTTGGGTTTCTTCTCTTTCCTAATTTCCTCTCTTTCCTTTTGTGCTTCTTTCAAACATATCCTTAAATCTTCAG AAATTGTTGGATTCTTATCCAATTCTTGATTTTCCCAATTTGGTCCAGTTGAACCTTTATTGAGGTTGTAAACTCCTTGTTGTTGGGTTTTGAAAGTTGA TTCCTTTTCACTTTCTGGATTCTGGGTTTCATTTCTCTTCTGGGTCCCTTTGATTCACCAGAGTTGGTTTAAGTTACTTGAAACCTGAAAATGACAATTG GAAATCTTGCACCAAAATCAGAGAAGAAAAGATCAAGGAAGAACAAAGCAGTTGTTGATGAGAATGCACCCTTGTTGCCTAAAACTCATGAGAGTGATGT TGGGTTTGATGATTTCAATGGAGCTTCATTTTCTGGGGCTGTTTTCAACTTATCCACCACAATTATTGGTGCTGGGATCATGGCTTTGCCTGCAACCTTG AAACAACTGGGTATGGTGCCGGGTCTTGTTGCAATCATCTTCATGGCCTTTTTGACTGAGAAGTCAATTGAGTTCTTGATTAGGTTCACCAGGGCAGGGA AATCTACTTCTTATGGAAGTTTAATGGGTGATTCCTTTGGGAAATATGGAAAAGCTCTCGTGCAATTATGTGTTATAGTCAATAACATTGGCGTGCTGAT TGTTTACATGATTATTATCGGTGATGTCCTCTCGGGAACAACCGCAAATGGAAAACATCATCCCGGTATCTTTGAAGGATGGTTTGGTGCGCACTGGTGG ACAGGCCGGACATTTATTGTCCTTTTAACAACACTTGCTATATTTGCGCCCCTAGCAAGCTTTAAGCGAATTGATTCATTGAGATTCACATCGGCCCTTT CAGTTGGTCTAGCAGTCGCTTTTCTTGTTATTGCCGTGGGAATCTCAATTGTCAAGATTTTAAGCGGAGGCATTGGGATGCCCAAACTATTTGCGGATGT TACTGATGTTTCATCGGTCTTTAAACTGTTTACTGTAGTCCCTGTGTTTGTTACTGCCTATATCTGCCACTACAATGTTCACACCATAGACAATGAACTT GAGGACAACTCGCAGATACAAGGGGTTGTACGAACTTCCCTTGCTCTATGCTCTTCAGTGTACATAATGATAAGCTTCTTTGGGTTCCTCCTATTTGGCG AAGGAACTCTTGATGACGTGCTTGCCAATTTTGATACCGATCTTGGAATTCCTTTCAGTTCTGTGCTTAATGATGCTGTTCGTTTAAGCTATGCTGCACA TCTCATGCTTGTATTTCCAGTTGTCTTCTTTCCGTTGCGGCTCAACATAGACGGTCTCCTCTTTTCTAAATCGAAGCCTTTGGTTCTGGATAACTTCAGA TTTGCATCACTTACTATTTCCCTTATTGCTGTTATCTTCCTCGGAGCAAATTTCATCCCTAGCATTTGGGATGCTTTCCAGTTCACCGGCGCAACTGCTG CAGTTTGTATCGGATTCATATTTCCAGCTGCCATCATTCTTAGGTCAGTTTCGTCACTGAATTTTTTAGTTCTTCAGTCCTGTCTATCCTTTTCAGAGGG CTAGCCTCGACGCAACTGTAAGGTTGTTTACATTGTGACCTGAGGTTATAGGTTAGATCCCGGAAACAGTTTTTTCGCTTGTGAAGTTGTAAGGGAAAAG TTGCATACGTCTATCCTTCCCAAATCCTACTAGGCAGGAGCCTCGTGCACTAGGCTGTCCTTTTTTCAGTGTCTTTTTATGCTTTTGACGCAACTTAATG AAGTCATCTTGCACCTATTTTGATCATGCAGGGACCGATACAATATAGCAACTAAAGGAGACAAGATTCTG BLAST |
| Tissue | pods |
| Gene name | LI_gene_188536; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_399036
| Blastp | Amino acid transporter AVT6A from Arabidopsis with 69.06% of identity |
|---|---|
| Blastx | Amino acid transporter AVT6A from Arabidopsis with 69.23% of identity |
| Eggnog | amino acid transport(COG0814) |
| Kegg | Link to kegg annotations (AT3G30390) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019420053.1) |
| Pfam | Transmembrane amino acid transporter protein (PF01490.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |