| Id Trinity | TRINITY_DN51912_c1_g1_i22 |
|---|---|
| Name Transcript | Ll_transcript_399039 |
| Sequence | CCTTATCCTATGAATACTCTTAATACTACTAAAATACCTATGTATGAATTTTGTCAAAAAATGGTGTAAGAATTTTACATAATGTTAGTATCTAGATATT ATTGCGTGTAATTTTCTGTTTCTAAAATATACTTTTCTGTTTGTGACTACTTTTCTGTTTCTGAATCTTTCTATAAAGTAAGCTTTATTGGACACCAATC TCTCAAAAACCTCTTCTTGTTCTTCTTTTGGGTTTCTTCTCTTTCCTAATTTCCTCTCTTTCCTTTTGTGCTTCTTTCAAACATATCCTTAAATCTTCAG AAATTGTTGGATTCTTATCCAATTCTTGATTTTCCCAATTTGGTCCAGTTGAACCTTTATTGAGGTTGTAAACTCCTTGTTGTTGGGTTTTGAAAGTTGA TTCCTTTTCACTTTCTGGATTCTGGGTTTCATTTCTCTTCTGGGTCCCTTTGATTCACCAGAGTTGGTTTAAGTTACTTGAAACCTGAAAATGACAATTG GAAATCTTGCACCAAAATCAGAGAAGAAAGGGTCAAGGAAGAACAAAGCAGTTGTTGATGAGAATGCACCCTTGTTGCCTAAAACTCATGAGAGTGATGT TGGGTTTGATGATTTCAATGGAGCTTCATTTTCTAGTGCTGTTTTTAACTTATCCACCACAATTATTGGTGCTGGGATCATGGCCTTGCCTGCTACCTTG AGAGAGTTGGGAATGGTGCCTGGTCTTCTTGCTATAATCTTCATGGCTCTCTTGACCGAGAAGTCAATTGAGTTTATGATCAGGTTTTCAAGGGCAGGGA ATCTCACTTCTTATGGTGGCCTAATGGGAGATGCATTTGGGAAGTATGGAACAGCTCTTGTGCAGATATGTGTTATAATCAACAACATTGGTGTTTTGAT TGTTTACATGATTATTATTGGTGATGTGCTCTCTGAAACTTCTTCTGGTGGAGATCATCATTCCGGTATCCTTGAAGGATGGTTTGGTGTACACTGGTGG ACCGGGCGTACTTTTGTTCTCCTTTTAACAACACTACTTGTTTTTGCACCTTTGGTTAGTTTTAAGAGAATTGATTCACTGAGATTCACTTCTGCACTAT CAGTTGGACTAGCAGTTGTTTTTCTTGTCATCGCTGTCGGAATCGCAGTTGTGAAGATTATCAATGGAGGCATTGGGATGCCGAGACTCTTCCCAATCAT TACTGATATGACATCATTCTTTAAATTGTTCACTGTTGTTCCTGTGCTTGTGACTGCATATATCTGCCACTATAATGTTCACAGCATAGATAATGAACTC GAGGACTCGTCGCAGATGCACAGCGTTGTACGCACTGCACTTACACTTTGCTCTTCAGTCTATATAATGACAAGCTTCTTTGGGTTCCTCCTATTTGGTG AAGGAACTCTTGACGACGTTCTTGCGAACTTTGATACTGATCTCGGGATTCCTTTCGGTTCTGTACTCAATGACATTGTTCGATTTAGCTACGCTGCGCA TCTCATGCTTGTATTTCCTGTCGTCTTCTATCCATTGAGGATCAACATAGATGGTCTCATATTTTCGAAGTCAAGACCTTTGGTTCTTGATAATTTCCGA TTTGCATCAATTACTATTGCCCTTATTGGTGTTATCTACCTTGGAGCAAATTTCATACCTAGCATTTGGGATGCTTTTCAGTTCACCGGAGCAACAGTTG CTGTTTGTGTAGGATTCATATTTCCTGCTGCTATCACACTTAGGGACAGGTACAACCTAGTAACTAAACAAGACAAGATTCTGTCTGTCATCATGATAGT CCTGGCAATCTTCTCAAGCGTTGTGGCTATATATAGTGATGCCTTTGCCTAGATGAAGAAGTGAAAGATCTCTCACATATTTTTGTTCAGGAGCAGAAAC TTGTAGCATGTTCATGCCTTCAAAGGAAGAGAAAAGGGTTCCATAATTTGCATTGTTTTTAGCCTATTAGAAAATGAGGGTTTTCTGAGAGGGCATGATG AGTTTATTATAGAATAAGCAATGAAGTAAAACCCTGTGTATACAAATATTCTTCAAAAGTTTATAAAGGCATGCAATCTTTGTTGTTGTAATTATGTAAA AGTTCTTTTTTGTCATTTGTATGTATGTTACTATTGGTGAAGATTAGCTTATAGTTCAAGCATTGGGGCAAAACAACAAAGTTGCTGAGAGAAAATGAAA TCTATCTCGGTâBLAST |
| Tissue | pods |
| Gene name | LI_gene_188536; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_399039
| Blastp | Amino acid transporter AVT6B from Arabidopsis with 68.74% of identity |
|---|---|
| Blastx | Amino acid transporter AVT6B from Arabidopsis with 68.56% of identity |
| Eggnog | amino acid transport(COG0814) |
| Kegg | Link to kegg annotations (AT5G38820) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019442767.1) |
| Pfam | Transmembrane amino acid transporter protein (PF01490.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |