Ll_transcript_399019

• Id Trinity: TRINITY_DN51912_c1_g1_i6
• Name Transcript: Ll_transcript_399019
• Sequence: TTTGTTCTCCTTTTAACAACACTACTTGTTTTTGCACCTTTGGTTAGTTTTAAGAGAATTGGTATGTGTTTTTTCATTCTTTGAAGTAGAAAAGAAAATG ATTAGTTATGACACTTGTTAAATTACAAATTACTGAAATTACCTGCCACAAATAAGATGTGAGTGTTAGGAAGATGATTGAAATGGCTATGGTTTCACAA TTGACAATGACAAGGGATTTCTATGCTAGAAAGGTTGTTGTCATGAAATATTACTTAAAGTATTTGTTAGAAGCGATAGGGTGATCCTTAGTGTAACGGT AAGGTTGTTGTGTAGGTATAGCAGTGTTATATACCCTTCTAGACCCTCCAGATGGGAACCTCGTACATTAGGTTGTTCATTTGTTTGAAGTTTGACAACC AAGTTAAATCAGCATTAAGGCTTAAGATGAGTTCGGTATCCTAATTAGTTACATGTTAATCTATTTTATTTCTACATTACTCAGTTTTGTCATGTTTAAA AATCAAAGATTAGGAAATTTTCATGTTCTACTGCCATAGATACTGTTTTATGAATATGATACCTTAATGGCATGACATAGTAGACATGTAATGTAATTTC AGCATCATTCTTTTGCTTTGTTACCTTATACATTTCAGTACCAAGTACCAAGATGTTAAATCTTATCTATAAGCAATATTTTTTGTTCAAGTTATGTGAT TCATCAAGCCTCACTTTTTCTACTAAACCTATGATGATTTCACATGCCTTGTCTATGTTGCAGATTCACTGAGATTCACTTCTGCACTATCAGTTGGACT AGCAGTTGTTTTTCTTGTCATCGCTGTCGGAATCGCAGTTGTGAAGATTATCAATGGAGGCATTGGGATGCCGAGACTCTTCCCAATCATTACTGATATG ACATCATTCTTTAAATTGTTCACTGTTGTTCCTGTGCTTGTGACTGCATATATCTGCCACTATAATGTTCACAGCATAGATAATGAACTCGAGGACTCGT CGCAGATGCACAGCGTTGTACGCACTGCACTTACACTTTGCTCTTCAGTCTATATAATGACAAGCTTCTTTGGGTTCCTCCTATTTGGTGAAGGAACTCT TGACGACGTTCTTGCGAACTTTGATACTGATCTCGGGATTCCTTTCGGTTCTGTACTCAATGACATTGTTCGATTTAGCTACGCTGCGCATCTCATGCTT GTATTTCCTGTCGTCTTCTATCCATTGAGGATCAACATAGATGGTCTCATATTTTCGAAGTCAAGACCTTTGGTTCTTGATAATTTCCGATTTGCATCAA TTACTATTGCCCTTATTGGTGTTATCTACCTTGGAGCAAATTTCATACCTAGCATTTGGGATGCTTTTCAGTTCACCGGAGCAACAGTTGCTGTTTGTGT AGGATTCATATTTCCTGCTGCTATCACACTTAGGGACAGGTACAACCTAGTAACTAAACAAGACAAGATTCTGTCTGTCATCATGATAGTCCTGGCAATC TTCTCAAGCGTTGTGGCTATATATAGTGATGCCTTTGCCTAGATGAAGAAGTGAAAGATCTCTCACATATTTTTGTTCAGGAGCAGAAACTTGTAGCATG TTCATGCCTTCAAAGGAAGAGAAAAGGGTTCCATAATTTGCATTGTTTTTAGCCTATTAGAAAATGAGGGTTTTCTGAGAGGGCATGATGAGTTTATTAT AGAATAAGCAATGAAGTAAAACCCTGTGTATACAAATATTCTTCAAAAGTTTATAAAGGCATGCAATCTTTGTTGTTGTAATTATGTAAAAGTTCTTTTT TGTCATTTGTATGTATGTTACTATTGGTGAAGATTAGCTTATAGTTCAAGCATTGGGGCAAAACAACAAAGTTGCTGAGAGAAAATGAAATCTATCTCGG T
• Tissue: pods
• Gene name: LI_gene_188536;
• Additional information: details;

Expression of Ll_transcript_399019

FPKM

• PAB: 0.3
• PNAB: 0.4
• PS1: 0.8
• PS2: 0.6
• PS3: 0.4
• PW1: 0.4
• PW2: 0.2
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_399019

• Blastp: Amino acid transporter AVT6B from Arabidopsis with 75.22% of identity
• Blastx: Amino acid transporter AVT6B from Arabidopsis with 72.06% of identity
• Eggnog: amino acid transport(COG0814)
• Kegg: Link to kegg annotations (AT5G38820)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019442767.1)
• Pfam: Transmembrane amino acid transporter protein (PF01490.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;