Id Trinity | TRINITY_DN51915_c1_g1_i15 |
---|---|
Name Transcript | Ll_transcript_397330 |
Sequence | GTCTAATTTACTCTTTATATCAATAATCTAACATAAAGTGTATTATAGTAAGGAGAGGGATTGTAACTGTGGTCGTAAATAGCTCAAAAAACATAGCCTT ATTTCCTGAACAGATTAAAAACAAGGTTTTCATCGCAATCTATGATGATCATCACCATGACAAGGCTTGAAGCAATATGATGATAAATAACATTTCTCCT TTCTCTTCACTCACAACATTAATCATATTTTTCCAAGTCCTTTTCTCTTTATCTTTCGTAATTTTTCATCACTTTCTTTCTTCACACGTGCATCAAACAC ACCTTTCTCACTCTTTATTCCTTGTGTTACAGAATGCATTCTGGGAACACTTCTCATCACTTAGACCCTGATGTTATTGAAATCCCAACCCCAATTACTC ACAACCCTGCTAAACAGAAAGAGGTCATTTTTCATGATGTCGTCGATATTAACAGCGATGACGACTCTGTGGATTTAGTGTTAAATGGTGAAAAGGACAT GTTTAATGAGACATTTCATCCGCATGTTATGGAAAAATCTGAACCAGGTAGCGGGGTTGAGTCTTCCGATGATTATACTTCAGCAGCGCATAATTTAAAC AGTGTTGATGACCATGGTTCTGACCAATCATGTGATGAAGACGACTATAGTGATCTTTTTTCGGATGATTATATGGACGTAGATGATTATGCTTCATTAC AGGCTCATTTTGATAATGTGGATATACCTCCTGGAATTGAGGCACCCATTCCTTGGTTGGCAGAGTATGATTTAGGTTCAAAGAAAACTGGAGGTAGCTC CTTGTATCCTTCGGGTCATATTCAGTCCGATCCTAAAAATTCTTGTTTAACAAACTTAGCACAGTCTCCATGGTCATTAGAACCTACTTACCCTGTTTCC CAAGGACCTTCAGTGGGTAGTTCTAGTTTACCAATCAAAATGGACTCTATTGACCATCCCTCCGAAATAGAGTTATCTTCTGCTCAGTTATTTTCTCAAA CTGTCCCAAGTAGGAAGAAATTAGATGCCTATCAATGCAGGAGGCGTAAGTTTAAGTTTTCATTAGGAGAGTCTTCTAAATGTCATTTGCATTTGGGACC TTCTGAAGGTAAAAAGAAGCATAGTGTTTTGGATGCTTTAAATAGCCATGAGCTTATACACAATTCAGAGACTATGAAGCTATATGGAGGTGTAACTCCA TATTGGGGACAATCTGCAAGTGCAAAGAAGGCAGGTGGAAGTAGTGGTTCACATAATTCAAATTTCGTTGGACCTGAAATTGGGTCATTGTATCCTCGAG CAATTGAAGTAACAAATCCTTGGTGGTTGAAGAGCCCCCCTTATGTTAAGTCATTTACTAATTCTAATTTTTTCTATCATGATAATACATGGGTTCACAA TGGATCTACTACTGATAATACTGTTGTGACAATCTCTGATGAGGCCAGAGATGAAATTTTGAGGAAATTCACAAATTTTAAACAGTTTGACACTGCTGAA GACACTTCAGACCATTACTTTGTTCATGTTGATTCTTCCGTGAAGCAGCATCCTAAGAATTGGGCTAAAAGAATCCAGGAAGAGTGGAAGTCATTGGAGA AGGATTTGCCTGACTCAATATTTGTCCGAGTTTATGAATCGAGGATAGATCTTTTGCGGGCTGTGATTATTGGAGCTGAGGGAACTCCTTATCATGATGG TCTTTTCTTTTTTGATGTTTTCTTCCCTAGTGGCTATCCTAATGTACCCCCACTTGTCCAGTACAACTCTGGTGGCCTTCGGCTCAACCCAAATTTATAT AATTGTGGCAAAGTATGCCTTAGTCTACTCAATACCTGGTCTGGCAGTAAGAATGAGAAGTGGCTTCCAGGTGTTTCAACAATTTTACAGGTTCTAGTCT CTATACAAGGTCTAATCTTGAATGCAAAGCCTTACTTTAATGAGCCTGGATTTGCACGTTCGAATGGTTCAGCAAGTGGTGAAATGAAGTCCCTGCGGTA TAATGAGGATATATTTATCCTATCATTGAGAACAATGGTGTATATGATTAGGAATCCTCCAAAGAATTTTGAGGAATTTGTTGCTGGCCACTTCTGCAGC CGCGCACATGATATTCTGATAGCATGTAAAGCATATATGGATGGAGCTCAAGTTGGCTGTTTGGTCAAAGGCGAGGTTCAGGATGTTGATCCGGTCGACA GGAGCTGCTCGAAGTTGTTCAAGAATTCTTTAGCTGGGTGTGTGAATATGCTTGTCAGAGAGTTTACGAGAACCGGAGCTAAGGATTGTGACAAATTCTT GTCTCCTTTAACAACAGCCGAGAACAAGCCACCGGGTCAATTGCCTGAGGCTCCTGCTACATTTTCTTTATGAACCCAATTTTGAGACTTGATACAAAAG GCTCATAACAATTAATTTATTACCGTTACAAGTAGGTTTATGTTTTATATTACATAGTTGAACTCTTATTATAGACTACCTTATTTTCGGGAACAATGCC TGCACATAATTCTGGATAAAATATGTAGTTGCAGATGAATACATAATGCATTGTTAGGTTGAAATGAGATCCATAATGAAATTATCATGGTTGACATGAT CATGATTTGTCTGTTAGACTTTTAGAAAACCTT BLAST |
Tissue | pods |
Gene name | LI_gene_188546; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_397330
Blastp | Probable ubiquitin-conjugating enzyme E2 26 from Arabidopsis with 59.93% of identity |
---|---|
Blastx | Probable ubiquitin-conjugating enzyme E2 26 from Arabidopsis with 52.87% of identity |
Eggnog | ubiquitin-conjugating enzyme(ENOG410XP8C) |
Kegg | Link to kegg annotations (AT1G53025) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019413879.1) |
Pfam | Ubiquitin-conjugating enzyme (PF00179.25) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |