Ll_transcript_397342

• Id Trinity: TRINITY_DN51915_c1_g1_i20
• Name Transcript: Ll_transcript_397342
• Sequence: GTCTAATTTACTCTTTATATCAATAATCTAACATAAAGTGTATTATAGTAAGGAGAGGGATTGTAACTGTGGTCGTAAATAGCTCAAAAAACATAGCCTT ATTTCCTGAACAGATTAAAAACAAGGTTTTCATCGCAATCTATGATGATCATCACCATGACAAGGCTTGAAGCAATATGATGATAAATAACATTTCTCCT TTCTCTTCACTCACAACATTAATCATATTTTTCCAAGTCCTTTTCTCTTTATCTTTCGTAATTTTTCATCACTTTCTTTCTTCACACGTGCATCAAACAC ACCTTTCTCACTCTTTATTCCTTGTGTTACAGAATGCATTCTGGGAACACTTCTCATCACTTAGACCCTGATGTTATTGAAATCCCAACCCCAATTACTC ACAACCCTGCTAAACAGAAAGAGGACATGTTTAATGAGACATTTCATCCGCATGTTATGGAAAAATCTGAACCAGGTAGCGGGGTTGAGTCTTCCGATGA TTATACTTCAGCAGCGCATAATTTAAACAGTGTTGATGACCATGGTTCTGACCAATCATGTGATGAAGACGACTATAGTGATCTTTTTTCGGATGATTAT ATGGACGTAGATGATTATGCTTCATTACAGGCTCATTTTGATAATGTGGATATACCTCCTGGAATTGAGGCACCCATTCCTTGGTTGGCAGAGTATGATT TAGGTTCAAAGAAAACTGGAGGTAGCTCCTTGTATCCTTCGGGTCATATTCAGTCCGATCCTAAAAATTCTTGTTTAACAAACTTAGCACAGTCTCCATG GTCATTAGAACCTACTTACCCTGTTTCCCAAGGACCTTCAGTGGGTAGTTCTAGTTTACCAATCAAAATGGACTCTATTGACCATCCCTCCGAAATAGAG TTATCTTCTGCTCAGTTATTTTCTCAAACTGTCCCAAGTAGGAAGAAATTAGATGCCTATCAATGCAGGAGGCGTAAGTTTAAGTTTTCATTAGGAGAGT CTTCTAAATGTCATTTGCATTTGGGACCTTCTGAAGGTAAAAAGAAGCATAGTGTTTTGGATGCTTTAAATAGCCATGAGCTTATACACAATTCAGAGAC TATGAAGCTATATGGAGGTGTAACTCCATATTGGGGACAATCTGCAAGTGCAAAGAAGGCAGGTGGAAGTAGTGGTTCACATAATTCAAATTTCGTTGGA CCTGAAATTGGGTCATTGTATCCTCGAGCAATTGAAGTAACAAATCCTTGGTGGTTGAAGAGCCCCCCTTATGTTAAGTCATTTACTAATTCTAATTTTT TCTATCATGATAATACATGGGTTCACAATGGATCTACTACTGATAATACTGTTGTGACAATCTCTGATGAGGCCAGAGATGAAATTTTGAGGAAATTCAC AAATTTTAAACAGTTTGACACTGCTGAAGACACTTCAGACCATTACTTTGTTCATGTTGATTCTTCCGTGAAGCAGCATCCTAAGAATTGGGCTAAAAGA ATCCAGGAAGAGTGGAAGTCATTGGAGAAGGATTTGCCTGACTCAATATTTGTCCGAGTTTATGAATCGAGGATAGATCTTTTGCGGGCTGTGATTATTG GAGCTGAGGGAACTCCTTATCATGATGGTCTTTTCTTTTTTGATGTTTTCTTCCCTAGTGGCTATCCTAATGTACCCCCACTTGTCCAGTACAACTCTGG TGGCCTTCGGCTCAACCCAAATTTATATAATTGTGGCAAAGTATGCCTTAGTCTACTCAATACCTGGTCTGGCAGTAAGAATGAGAAGTGGCTTCCAGGT GTTTCAACAATTTTACAGGTTCTAGTCTCTATACAAGGTCTAATCTTGAATGCAAAGCCTTACTTTAATGAGCCTGGATTTGCACGTTCGAATGGTTCAG CAAGTGGTGAAATGAAGTCCCTGCGGTATAATGAGGATATATTTATCCTATCATTGAGAACAATGGTGTATATGATTAGGAATCCTCCAAAGAATTTTGA GGAATTTGTTGCTGGCCACTTCTGCAGCCGCGCACATGATATTCTGATAGCATGTAAAGCATATATGGATGGAGCTCAAGTTGGCTGTTTGGTCAAAGGC GAGGTTCAGGATGTTGATCCGGTCGACAGGAGCTGCTCGAAGTTGTTCAAGAATTCTTTAGCTGGGTGTGTGAATATGCTTGTCAGAGAGTTTACGAGAA CCGGAGCTAAGGATTGTGACAAATTCTTGTCTCCTTTAACAACAGCCGAGAACAAGCCACCGGGTCAATTGCCTGAGGCTCCTGCTACATTTTCTTTATG AACCCAATTTTGAGACTTGATACAAAAGGCTCATAACAATTAATTTATTACCGTTACAAGTAGGTTTATGTTTTATATTACATAGTTGAACTCTTATTAT AGACTACCTTATTTTCGGGAACAATGCCTGCACATAATTCTGGATAAAATATGTAGTTGCAGATGAATACATAATGCATTGTTAGGTTGAAATGAGATCC ATAATGAAATTATCATGGTTGACATGATCATGATTTGTCTGTTAGACTTTTAGAAAACCTT
• Tissue: pods
• Gene name: LI_gene_188546;
• Additional information: details;

Expression of Ll_transcript_397342

FPKM

• PAB: 6.4
• PNAB: 7.8
• PS1: 9.5
• PS2: 6.2
• PS3: 8.8
• PW1: 4
• PW2: 3.6
• PW3: 3.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_397342

• Blastp: Probable ubiquitin-conjugating enzyme E2 26 from Arabidopsis with 59.93% of identity
• Blastx: Probable ubiquitin-conjugating enzyme E2 26 from Arabidopsis with 59.93% of identity
• Eggnog: ubiquitin-conjugating enzyme(ENOG410XP8C)
• Kegg: Link to kegg annotations (AT1G53025)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413880.1)
• Pfam: Ubiquitin-conjugating enzyme (PF00179.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;