| Id Trinity | TRINITY_DN51915_c1_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_397300 |
| Sequence | GTCTAATTTACTCTTTATATCAATAATCTAACATAAAGTGTATTATAGTAAGGAGAGGGATTGTAACTGTGGTCGTAAATAGCTCAAAAAACATAGCCTT ATTTCCTGAACAGATTAAAAACAAGGTTTTCATCGCAATCTATGATGATCATCACCATGACAAGGCTTGAAGCAATATGATGATAAATAACATTTCTCCT TTCTCTTCACTCACAACATTAATCATATTTTTCCAAGTCCTTTTCTCTTTATCTTTCGTAATTTTTCATCACTTTCTTTCTTCACACGTGCATCAAACAC ACCTTTCTCACTCTTTATTCCTTGTGTTACAGAATGCATTCTGGGAACACTTCTCATCACTTAGACCCTGATGTTATTGAAATCCCAACCCCAATTACTC ACAACCCTGCTAAACAGAAAGAGGTCATTTTTCATGATGTCGTCGATATTAACAGCGATGACGACTCTGTGGATTTAGTGTTAAATGGTGAAAAGGACAT GTTTAATGAGACATTTCATCCGCATGTTATGGAAAAATCTGAACCAGGTAGCGGGGTTGAGTCTTCCGATGATTATACTTCAGCAGCGCATAATTTAAAC AGTGTTGATGACCATGGTTCTGACCAATCATGTGATGAAGACGACTATAGTGATCTTTTTTCGGATGATTATATGGACGTAGATGATTATGCTTCATTAC AGGCTCATTTTGATAATGTGGATATACCTCCTGGAATTGAGGCACCCATTCCTTGGTTGGCAGAGTATGATTTAGGTTCAAAGAAAACTGGAGGTAGCTC CTTGTATCCTTCGGGTCATATTCAGTCCGATCCTAAAAATTCTTGTTTAACAAACTTAGCACAGTCTCCATGGTCATTAGAACCTACTTACCCTGTTTCC CAAGGACCTTCAGTGGGTAGTTCTAGTTTACCAATCAAAATGGACTCTATTGACCATCCCTCCGAAATAGAGTTATCTTCTGCTCAGTTATTTTCTCAAA CTGTCCCAAGTAGGAAGAAATTAGATGCCTATCAATGCAGGAGGCGTAAGTTTAAGTTTTCATTAGGAGAGTCTTCTAAATGTCATTTGCATTTGGGACC TTCTGAAGGTAAAAAGAAGCATAGTGTTTTGGATGCTTTAAATAGCCATGAGCTTATACACAATTCAGAGACTATGAAGCTATATGGAGGTGTAACTCCA TATTGGGGACAATCTGCAAGTGCAAAGAAGGCAGGTGGAAGTAGTGGTTCACATAATTCAAATTTCGTTGGACCTGAAATTGGGTCATTGTATCCTCGAG CAATTGAAGTAACAAATCCTTGGTGGTTGAAGAGCCCCCCTTATGTTAAGTCATTTACTAATTCTAATTTTTTCTATCATGATAATACATGGGTTCACAA TGGATCTACTACTGATAATACTGTTGTGACAATCTCTGATGAGGCCAGAGATGAAATTTTGAGGAAATTCACAAATTTTAAACAGTTTGACACTGCTGAA GACACTTCAGACCATTACTTTGTTCATGTTGATTCTTCCGTGAAGCAGCATCCTAAGAATTGGGCTAAAAGAATCCAGGAAGAGTGGAAGTCATTGGAGA AGGATTTGCCTGACTCAATATTTGTCCGAGTTTATGAATCGAGGATAGATCTTTTGCGGGCTGTGATTATTGGAGCTGAGGGAACTCCTTATCATGATGG TCTTTTCTTTTTTGATGTTTTCTTCCCTAGTGGCTATCCTAATGTACCCCCACTTGTCCAGTACAACTCTGGTGGCCTTCGGCTCAACCCAAATTTATAT AATTGTGGCAAAGTATGCCTTAGTCTACTCAATACCTGGTCTGGCAGTAAGAATGAGAAGTGGCTTCCAGGTGTTTCAACAATTTTACAGGTTCTAGTCT CTATACAAGGTCTAATCTTGAATGCAAAGCCTTACTTTAATGAGCCTGGATTTGCACGTTCGAATGGTTCAGCAAGTGGTGAAATGAAGTCCCTGCGGTA TAATGAGGATATATTTATCCTATCATTGAGAACAATGGTGTATATGATTAGGAATCCTCCAAAGGTTGGATTCTAGAACCCCCATATCTTGGTTCTTTTT TTTAATATCTCAAACATGTTATATTGTTTTAAGAAGTGTGCAAAGCATGTTCATTCTTACCACCTCAAGGAAATGATGCATAGGCCTGTGCCAGTTCTTT TTGGCAAGCAATGGAGACAAATGAGAGAAGTAATAAGCTATATCTAATTTAGGAAGAAAGTTTGTCATTTTAGAACAATAGTTATCAAATATATAGGCAA ATAGTTTCGAGGATTTCTATTCAGTTATTTCTGAAGTACTAGTAGGGATGTAAGATATATTCACTTTCATTAGCCTAGAATTGACATCTTGCCATTGATA ATTGTCTACATTTAGCTGCATTAATCAAGATACTTTACAAATTAGTTAAACATATTGACTCATCTTTGCAAAACATTTACTGACATGGTTTATTGCTTTC TCATCAAGTCTAAAGTGGTTTTTTTTTAATAAAGTGTCTCTATGCTTGCTATATTTAGCCTTTCCAAGGTCTTGGTTCTTTTATGTGTTGTGGATATTGA ACCACTATTTACTATTTCAAATCATCAATAGTGAAGCATCCTTTGTTTGATAAACTCCTATGCTCATCAACTTAGACACACTTCCTACTACTGGAATGTA TCAGCGCATAGTGAAAATCCATACTACATGCATTCCATTAGTTTTATTATTGCACATGGTCTTTCGTCTTTGGGAAGACTTGGAACATCAATGGTTAAAT GCATATTCGTCAACAAATGTACATATCTAACAACAGCATACTCATAATCACTTAATCTTTGCCTTAAAACTACATGGAATTTGTTTCTTATCAATCTTCT ATCGGTTGGCGTGTTCCCACTCCAGGTTATTGGATCTTTTAAACACCGATCCTCCTTGCAGAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_188546; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_397300
| Blastp | Probable ubiquitin-conjugating enzyme E2 25 from Arabidopsis with 68.78% of identity |
|---|---|
| Blastx | Probable ubiquitin-conjugating enzyme E2 25 from Arabidopsis with 68.78% of identity |
| Eggnog | ubiquitin-conjugating enzyme(ENOG410XP8C) |
| Kegg | Link to kegg annotations (AT3G15355) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019413879.1) |
| Pfam | Ubiquitin-conjugating enzyme (PF00179.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |