Ll_transcript_397305

• Id Trinity: TRINITY_DN51915_c1_g7_i1
• Name Transcript: Ll_transcript_397305
• Sequence: CTTGGTCAATAAGCATCACACATTCACACTGTATTAGTAATTAGTAACAATTAATGTTTTATTTTGTGTCCCTTTGTATCTACTTTCTGTGCTTTTTCTC CACTCTTCTCCCTCAGACTCTGTTTCCAATGGATCTCCATGTTGACCCACAGAATTCTGTACTGAAGAAACGCAAGCAAGAAGAAGAAGAACAAGTGGAT ATTGATAATGGAAATTCAATGAGCATGGGAGAATCATCTGGTAGTGGGGTTCTGTGCAAGAGTTCTACCTCAGCATCAATGAATTCAAACAATCCCAGTG GTTCTAATTCTGATATTTCATGTCAGGATGACGAGGGTATGATTGATGATGAAGAACTTGATGATGCTCCTGATTATGGCTTCGATTATTACATTGATGA TGATGACGATGCCTATGAAAATGATTATTTAAGTTTAATGGATCAATTTGATAATGTGGATTTGCCTCCTGGAGTAGAGGCACCACTACCTTGGCTGAAG GACATTGCATCAAGTGAATCAAAGCAGGGTGTTGCTCCTGCCTGTGCAGAATCTAGTTCTAAGGGAAAAGCAGAAGAAACTGAAGACGAGGTCATGCAAA AGTTTCGGCAATTTAAGCAATTTGATACTATTGATGCTTATCCTGATCATTTCTATGATAAGGAGGGTGCTAAAGAGGCACAGAGCCCTAAGAATTGGGC CAAGAAAATCCAAGAAGAATGGAAAATCTTGGAAGAAAATTTGCCTGAAACAATCTTTGTCAGAGCTTGTGAAGGCAAGATGGAACTTCTAAGGGCTGCC ATCATTGGACCTCAAGGCACTCCATACCATGATGGTCTTTTCTTTTTTGATTGCTATTTCCCTTCAACCTACCCTGCAATTCCACCGAAAGTTCACTACC ACGCAGGTGGTCTCAGGCTAAATCCAAATTTATATGCTTGTGGAAAAGTCTGCCTTAGTCTTTTGGGCACTTGGCATGGAAAAAATAATGAAAATTGGAT TCCAGAAAAATCAACCATGCTCCAAGTTTTGGTCTCTATACAAGCTCTGATTCTGAATGAGAAGCCCTTCTTTAATGAGCCTGGCTATTCATCAACATAT GCGGGTCAAGAGGGGCAAAGAAGATCCAAGGATTACAATGACAATACATTTATTTTATCCTTGAAGACAATGATGTATACAATGCGTAAGCCGCCGAAGC ACTTCGAGGACTTGGTTGCCGGGCATTTCCGCGAGCGAGCATATAACATACTAATAGCATGTAGATCATACGTCGAGGGGGCTCCAGTTGGCACAGTTGT ACATGATCTAGCTCAAACTACTTATGATAGCATTCCATACAACAACAACCAAAAAGAATTCCAATCAGCTGTGAGTAGGATGATGAATACTCTCATTGCA TTTTTCAGCAAAAACGGCTCAACAGATTGCGAGGAGTTTCGATCTCTGGATCTTTGCAACATATCTGACGTGGCTACTACAAATTTGGAGCTTTACAAAA TAGAATCTGCCTCAACACTTGCCATAACCGCTAGTGATGTCTGAAGGTTTTCGGTTGTTCATGTTGTGAACGGGTAAGAGTTTCTTTTTTATGGTCACAT ATGGTGATTCTCATTGCTGGTTACTATAAATAACACCTAGTTGTAAAGACTGACATGGTAGTTTAGCTTTTGAAAAGGGTTCTGCAGTCTGCTTCTCTTA TGGTCTTCGCTTGTTTCTTTTCGTAAGTGAATAGTTTTACGAGATTATTATGTAGAGGATAGGTTTCTCCGAACATTTTTCCGCTGGACATGTCACATGG CAGAAGGCTTTTTCTGTAAATATAACACGAATTTCTTTAGTTGAATCTATGTTATTATTATTTGTACAATCTGCACAATTTTTGATTGTGTAAGGCTGGA CATTTTATTTCTGAATATGGAAGACATCGTAGAAGATCATGTTAAGGAGTTCATTGCTAAACCTCTCGTTTCAATCGATTTGGAAGAATAGGTGTTCATC GATAAACCTACGATTTCAATCTATTTGAAAGAGAGAACGCACTTATGGGGGTTTGATCTTCATATATTAGTGTGTGATGTGTAGGTTTGTAGATATGTCA TTTCTCTATGATCATACCATGTAAATATTATTTCGTAGTGTG
• Tissue: pods
• Gene name: LI_gene_188553;
• Additional information: details;

Expression of Ll_transcript_397305

FPKM

• PAB: 7.7
• PNAB: 7.8
• PS1: 13
• PS2: 7.9
• PS3: 12.5
• PW1: 9.9
• PW2: 10.9
• PW3: 8.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_397305

• Blastp: Putative ubiquitin-conjugating enzyme E2 38 from Arabidopsis with 55.32% of identity
• Blastx: Putative ubiquitin-conjugating enzyme E2 38 from Arabidopsis with 55.32% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019437371.1)
• Pfam: Ubiquitin-conjugating enzyme (PF00179.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;