| Id Trinity | TRINITY_DN51921_c2_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_398792 |
| Sequence | CTTGTATGCAGAGAGATATTAAATTGTTAAATTATGTGTTACCATCCGCCTATAAATACCCCGTTTCTTCCTCATTTGATTAACAACCTTCATATCTCTC TCTGTTTTCATAACCCAACCAAAAGCTCCATCGATTCTATTTCCATTCCATTCTTAACTTGTATGGCAGTGAGATTATTATCAGCAAATGAGGTTTCTGA TCTGTGTCTTGGTAAGCCTGCGATCAGATCCATTTCCCTAAACGACACCGTTTCTGATGCTCTTTCATTCCTGAAAAGCATTCCTGAAACCTACGTCAGC GTTTGGAATTGTCACCATTCTCTTAACCATAACGAAGATTGTGTTTGTGTTGGGAAACTTTGCATGGTCAATATCATATGTTTCCTTTCTAAGCCAATTA ATCTTAAGTCTCCTTCAATTGCACTTCAATCTCCGATCTCTCTTCTTGTTACGGAGAGTGTTGATCTTGTTAGGCATCTTAAACCTCATGCCAGTTTATT AGAGGCTATAGATGCTATGCATGAAGGGGTGCAGAATGTGGTGATACCAATACAAAACCGGAACTCAAGGAAAAAGGGTGCTGAAAAGGCACCATCTTTG GTGAATCCCAACCATGACAATAAAACCAACTACACCTATTGCTGGCTCACACAAGAGGATGTAATCCGCTACCTCCTTAACTCAATTGGGTTGTTCTCCC CTGCATCCTCCAGCCCCATAAACACATTGAATGTTATTGACACTCAGAATCTATTAGCTATCTATTATGAGGACCCTGCTTCCTCTGCATTAGACCTACT CAATGTGTCCCTTATTAATGGGAGTTCTGTTGCCATTGTTAACCCACAAGGCAAGTTTGTTGGTGAAATCTCACCAGTCATGCTGAATTCTTGCGACGAA GGCCTTGTGCCGCCAATAGCCACGCTTTCTGCTGGCGATCTGATGGCATTTATTGATGCTGGTGGGCCACCTGAGGACTTGGTGCAGCTGGTGAAGGAGA GGCTGGAGAAGCAGAACTTAGGGGCTGCTTTGGAGTTGTTGGTTGGAGATGAATCAGGAATTTCATCATGGTCCTCGTCTTCTTCGAGTTCTTCCGATGA AGAGTTTTGCTCCGGGAAGAATTGGAAGCTTGGAGGGTACTCAGCTAGGGTTGTGAGAAGATCAGAAGCCATTGTTTGCTATCCATGGAGTTCTTTGTTG GCTGTTATGATTCAGGCACTAGCACACAGGGTGAGTTATGTTTGGGTTGTGGAAGAGGATGGAACCTTAACTGGGATTGTTACTTTCGAAGGCATGTTGA AAGTTTTCAGAGAACACCTCAAAACCATGTCCTAACAAGACATGATGCATGATGAAAACAAAAACAGCTTCAATATAAGTAATGAGCCAACCATCTTCTT TTGTTTTGCCTAAGGAATCAGACATAAGGACATCAACATATGAGGTATATATATCGTGCTCACATAATAAAATTTGCTCCTTGTTCATAAATGGGTACTT TGAAACAAATAGTTTCTTTTTCTGTTGGTTGACAAGCTTGTGTTTAGAAATGTGGCTTTTCTATCTTATTGAACTTGATGTCATTAGACATTGTATTTTT GAGTTTCATATTTCACGTGGATGTGAAAAGCATTCCTGAACGATAATTATACCAACTATTACCTGGAAAAACTTAACATGAATTAGCATCATGTTGCTTG CTTCTCCATGAAATCAGATGTATTATCTGTTTTTCCCTTGTTAACCTTATTGCATTAAATAATGTGCAGTAATGAACTAATGATGAGTATAAGTTGTTAA GGAATGTTTAGTGAGAATATCAATGTTGTAAAGATCGGACAATTTGACTGGTCTGATCGCTAATCAGATTTGAAAATGACTTTGACTTATAATCTTAATT GAATGAATGGTTAAACCATTTTGAATTGGAGAAATATTTGTCCAAACATATTAAAGTTAGTTAAACCTGAATAATCCGAGAAGTGAACCTATTGATTTAC TTAAAATTAAAAAAAATCAAACATTATTCTAATGTTTTGTTTTATTTTGGTATAAAAAAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_188597; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_398792
| Blastp | CBS domain-containing protein CBSX5 from Arabidopsis with 43.29% of identity |
|---|---|
| Blastx | CBS domain-containing protein CBSX5 from Arabidopsis with 43.29% of identity |
| Eggnog | CBS domain-containing protein(ENOG4111QFC) |
| Kegg | Link to kegg annotations (AT4G27460) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019425286.1) |
| Pfam | CBS domain (PF00571.27) |
| Rfam | - |
| GO | - |