Ll_transcript_399832

Id TrinityTRINITY_DN51922_c2_g2_i3
Name TranscriptLl_transcript_399832
SequenceCAAACCCGTTTGGGCCCAATCTGGGTTAAGAAAAGAGGGAAGGGGGTATAGGTTTTTTTTAGCTTTCACTTCTTCCCCTCTCCAAACAGAAACCCTAGCA GCCTCCCCATTGCGAATCTCTCTCCCTCCTTCGAATCCATTTTCTTTCTCCTTCGAATCCAGTTTTCTCCTCCTTTGAATTCGGTTTCCATCATCATCTA CACCTTCGATTTTATTTACTCTTGCGTTCATCATCACCTTCCTGTGGTTCCTTCTTCTTCATGGACTCACATCCCTCTCCTTCGTCTTCGATTCGGTTTT ATTTGTCTTCTCACCCTCGACCCTCATAGTTTCATTCGTATCTTTCAATTACCTTCGATTAGGGTTACTGCTTAGCCCTTTTCTTGGTCCAGCGGCAACA ACAAAGTCACGAAGACCACCAACGGAGGGTGGACAAGATGGTGATATGGCCCTAATCGTGGATGGCTCGTGGCTGGAGCAATATCGCCTATGGCAGCATC TTAATATCGAAGGAAACTTAAATGGATTCGTCTTTTGAAGTGATGAGAAGTCAATGCCAAAAAATGCCAGATGTTCTGCTAAAAGTGGGTCCAATACACT ATCATCCTCTGGATAGGAGTAGGCATCTGCTGAGCATTTTAATTATACTGAAAATTTACGGAACTGGAATGGGTTAAGAAAATTCCGAGGATATTTTCGT CAGGAGATAACTATCTGAAGTCATTTATTTTTCCACTTATTGAGGAAACTCTTACAGATTTGTGCTCCAATATTAAGATGGTGTCAGAAGCTCCAATATG CCAAATAACTGACATTGATTTTGCTCAAGATTACAATCCTCCAAACAATTTGTTATACAAGATTGAAATGAACACAGTAGTGGAAAGTGATAAAAAAGGG GACGCTTATGAGCCTGAGCCGGGAGATCTCGTTGCTTTGACTAATACCAGGCCAACATGCATTGGTGATTTGAAGAAGCCTGGAAATTCCTATTTCATTT CTTTGATTAAAAGGGTAAGACAGGATATAGAGAATAAAAATGTTTACAAGGTTCAAATACTAGCCTCAAAGCCTATAAAATTTGAAGCCTACTTGCGCAA GGATGACAGGTATGTAGATGCTTTTGCTGTCTACGTTGGTAACATCACAACAAATGTGCGTATATGGAATGCACTGAATACAGAGCCAGATGGTCCAGGC ATGTATATCATCAAGAAACTTCTCCAACCTAATTCTGAAGTTGGTGAAAACTGTGCTCAATGTTTCTCCAGTGAAAGGTACAATATTGATGTATCAATTC TTGGTGCTATAATCCGTTCATTTGATTTGAACAAATCTCAAGAAGACAGAATTGTAAGCTGTTTAGCTGCAAGGGAATGTTCTCACAAAAATACTGTGAA ATTGATTTGGGGCCCTCCAGGGACAGGGAAAACAAAAACAGTTGGCTCGCTATTATTTTGCCTCTTCAAAAGGAAATGCCAAACACTTACTTGTGCCCCA ACTAATGTGGCAGTGCTGGAAGTTATAACTCGGTTTCTTAGGCTAGTAATGGAGTCCCTAGATTATCACACTTATGGTCTTGGAGACATAATATTATTCG GTAATAAAAAGCGGATGAGGATTGACACTCGTGATGATCTTCTAGATGTATTTCTTGATTACCGTGCAAATATTCTTGCCAAGTGCTTTGCACCTTTATC TGGTTGGAAACATAATTTGGAGCTGATGATATGTTTACTTGAAAATCCAGGAGAACAATATCATAAGTATTTAAAAGATGAGGAAAAGAGGGATTATATG ACAGATGGTGATGATTGTTTGAAAGAAGAGATGGAACAACATTCAATTTCAAGTCCACAAACAAATGAAGAAAAATTGGATATCAAATCCCAGGATCCGA AAAATGGCAAGCAAAATGACTGGAAGAGTATAGTTAATAAAACTTTAAGAGAAAGCAGGTTGTGTTTTAAGGAGGAAAACAGAAATAAATATCATAAACA AGCGAATAGGGGTTTTCCTTTTCAAGAGAAGAAAATAGAAACGTTGACATTTCTTGAGTTTGTGAAGAAAAAAATGAATTCCATCAGGACACAGATGAGG AAATATGTTGTGGATATGTGTACTCATTTGCCAACTTCTTCAATTTCGTTAAGAGTCTTGAAAAACTTATTTGAATGTCTTGATTGGCTGAAAGATCTTT CGATGGTGCTATTAGACAATTCCATTACTGAAGACGGATTTCAACTCGCCCTTAATACATCTGATGTTGATGAAAGTAGACTTAGTTGCTATACATGGCA GTCTAAGCTGTGTACAACCAGGAAAAAATGCCTTAAAATGCTGAAATCAATTCAAGATGTGTTGATTCTTCCTAAATTTTTTGATGAATCTTCAATTAAA AATTTTTGTCTTAAAAGAGCTCGCATGATATTTTGTACTGCTTCGAGCTCTGCTAGATTGCATGCAGAAGGACTTGATAGACTAGAAATATTAGTTGTTG ATGAGGCTGCCCAGCTCAAAGAATGTGAGTCAAACATACCTTTACAACTTCCGGGTCTTCGCCATGTTGTACTTGTTGGAGATGAGAAACAGTTGCCTGC ACTAGTCAAAAGTGAGATTTCTGAGAAGGCAGGAATCGGAAGAAGTTTGTTTGAAAGGCTGGTTATTTTGGGTCATGATAAACAGCTTCTCAATGTTCAA TATAGAATGCATCCATCCATAAGCTCATTTCCAAATATGGAGTTCTATGACAAACAGATTTTGGATTCTCCAAGTGTCAAAAAAGGAAGCTATGAGAAGC ATTTTCTACATGGGGATATGTTTAAGTCCTACTCATTTATAAATGTCGATTTTGGACAAGATGAACTTAATGAAGGGACTAGCCGAAAAAATATGGTGGA AGTAGCTGTGGTATCAA BLAST
Tissuepods
Gene nameLI_gene_188612; 
Additional informationdetails; 

Expression of Ll_transcript_399832

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_399832
BlastpProbable helicase MAGATAMA 3 from Arabidopsis with 35.56% of identity
BlastxProbable helicase MAGATAMA 3 from Arabidopsis with 35.56% of identity
EggnogHelicase(COG1112)
KeggLink to kegg annotations (AT4G15570)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019419355.1)
PfamAAA domain (PF13086.5)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;