Ll_transcript_399836

• Id Trinity: TRINITY_DN51922_c2_g2_i5
• Name Transcript: Ll_transcript_399836
• Sequence: CTCTCCTCCTTCGTCACCTTCGTTTCTCTCTTCCATTTATCACGAGATGCCTCAATCTCCAAGCCACTCACTTCTCCATCTATCTTCACCCTCTCATTCT CCTCAATGTTCCCAATTTCGAAACCCTAACCCTAATTCCATTTTCCTCTTTCGATTTCACTTTCGTTTGCCTTCGATCCCATTTTCATCTCCTTCGGTTC GATTCCCCCCTCCTTCGAATTCGGTTTCCATCTCCTCCGGTTCGATTTTGTTTTCCATCATCATCTACACCTTCGATTTTATTTACTCTTGCGTTCATCA TCACTTTCCTCTGGTTCCTTCTTCTTCATGGATTCACATCTCTCTCCTTCGTCTTCGATTCGGTTTTATTTGTCTTCTCACCCTCGACCCTCATAGTTTC ATTCGTATCTTTCAATTACCTTCGATTAGGGTTACTGCTTAGCCCTTTTCTTGGTCCAGCGGCAACAACAAAGTCACGAAGACCACCAACGGAGGGTGGA CAAGATGGTGATATGGCCCTAATCGTGGATGGCTCGTGGCTGGAGCAATATCGCCTATGGCAGCATCTTAATATCGAAGGAAACTTAAATGGATTCGTCT TTTGAAGTGATGAGAAGTCAATGCCAAAAAATGCCAGATGTTCTGCTAAAAGTGGGTCCAATACACTATCATCCTCTGGATAGGAGTAGGCATCTGCTGA GCATTTTAATTATACTGAAAATTTACGGAACTGGAATGGGTTAAGAAAATTCCGAGGATATTTTCGTCAGGAGATAACTATCTGAAGTCATTTATTTTTC CACTTATTGAGGAAACTCTTACAGATTTGTGCTCCAATATTAAGATGGTGTCAGAAGCTCCAATATGCCAAATAACTGACATTGATTTTGCTCAAGATTA CAATCCTCCAAACAATTTGTTATACAAGATTGAAATGAACACAGTAGTGGAAAGTGATAAAAAAGGGGACGCTTATGAGCCTGAGCCGGGAGATCTCGTT GCTTTGACTAATATCAGGCCAACATGCATTGATGATTTGAACAAGCCTGGAAATTCCTATTTCATTTCTTTGATTAAAAGGGTAAGACAGGATATAGAGA ATAAAAATGTTTACAAGGTTCAAATACTAGCCTCAAAGCCTATAAAATTTGAAGCCTACTTGCGCAAGGATGACAGGTATGTAGATGCTTTTGCTGTCTA CGTTGGTAACATCACAACAAATGTGCGTATATGGAATGCACTGAATACAGAGCCAGATGGTCCAGGCATGTATATCATCAAGAAACTTCTCCAACCTAAT TCTGAAGTTGGTGAAAACTGTGCTCAATGTTTCTCCAGTGAAAGGTACAATATTGATGTATCAATTCTTGGTGCTATAATCCGTTCATTTGATTTGAACA AATCTCAAGAAGACAGAATTGTAAGCTGTTTAGCTGCAAGGGAATGTTCTCACAAAAATACTGTGAAATTGATTTGGGGCCCTCCAGGGACAGGGAAAAC AAAAACAGTTGGCTCGCTATTATTTTGCCTCTTCAAAAGGAAATGCCAAACACTTACTTGTGCCCCAACTAATGTGGCAGTGCTGGAAGTTATAACTCGG TTTCTTAGGCTAGTAATGGAGTCCCTAGATTATCACACTTATGGTCTTGGAGACATAATATTATTCGGTAATAAAAAGCGGATGAGGATTGACACTCGTG ATGATCTTCTAGATGTATTTCTTGATTACCGTGCAAATATTCTTGCCAAGTGCTTTGCACCTTTATCTGGTTGGAAACATAATTTGGAGCTGATGATATG TTTACTTGAAAATCCAGGAGAACAATATCATAAGTATTTAAAAGATGAGGAAAAGAGGGATTAT
• Tissue: pods
• Gene name: LI_gene_188612;
• Additional information: details;

Expression of Ll_transcript_399836

FPKM

• PAB: 0
• PNAB: 0.4
• PS1: 0.2
• PS2: 0.4
• PS3: 0.3
• PW1: 0.2
• PW2: 0.2
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_399836

• Blastp: DNA-binding protein SMUBP-2 from Rattus with 32.23% of identity
• Blastx: Ubiquitin carboxyl-terminal hydrolase 14 from Arabidopsis with 88.57% of identity
• Eggnog: Helicase(COG1112)
• Kegg: Link to kegg annotations (29532)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019419355.1)
• Pfam: AAA domain (PF13086.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;