| Id Trinity | TRINITY_DN51924_c1_g2_i18 |
|---|---|
| Name Transcript | Ll_transcript_397972 |
| Sequence | TATCAACAACATATACTCTCACAATTCTTTCAATATTTCATGCTTTTGCATTATCATCAGAAACTTCTTCCAGAAACAATATGATTTTCCCTCAACTTCT CTGCATGATGATTCTTGCATGTGCCTATGCTTCTTTGGCTAGTGGAGCTACTCTATCAGAAGATGAAGTTGAAGTTATGAAAGATATAGGTAAGACAGTT GGGAAAAAGGATTGGGATTTTAGTGTTGATCCATGCAGTGGAGAAGGTAACTGGACATCATTTGTTCAAGACAAAGGGTTCCAAAATGCTGTCACATGTG ATTGTTCTTTTGCCAATGGCTCACTATGCCATGTTGTTAGCATTATTCTCAAGTCACAAAATCTTTCTGGCACACTCCCAAGTGAACTAGTGAGGTTGCC CTTCCTCCAAGAAATTGACGTCACCCGCAATTACCTTAATGGTACAATCCCTCCACAATGGGGCTCCATGAATCTTGTCAATATTTCACTTCTTGGAAAC AGATTAACTGGTTCAATCCCAAAAGAACTGGGAAACATCACCACCCTGAAAAAATTGGTCCTGGAGTTCAATCAATTATCTGGAAATCTTCCTCCAGAGC TTGGGAATCTTCCCCAGCTTGAAATGCTGCTTCTTACCTCCAACAATTTTACTGGAAATTTACCTGCAACATTTGCAGAGCTCACTACATTGAAACATCT ACGAATTGGCGATAATCAATTCTCTGGAACTATACCGAATTTTATTCAGAGCTTGACCAATCTTGAGAGGCTGGTGATGCAAGGGAGTGGTTTGAGTGGG CCTATTCCTTCTGGAATTTCACTTCTGGAAAACCTCAATGACTTGACAATTAGTGACTTGAATGGATCTGATTCACCTTTTCCGCTACTTAATAATTTGA CAAATTTGAAGAAACTGGTATTGAGGAGTTGCAATATTGTTGGAGCAGTACCTGGGTATCTTGGGAATTTCACTAATTTGACAGTGATAGACCTTAGCTA CAACAAATTAACTGGACAAATCCCAATGAGCTTTGATGGTCTGAATAACTTGTATATGCTAGTTTTATCTCGGAATCTTTTGTCTGGACCTCTGCCTACC TGGATAGATAAACCAGACTTCGTAGATCTCTCATATAACAACTTCAGCATCAAAAACATTGAGCAGAAGCAGACTTGTCAACAAGGAAGCGTGTAAGAAT CCTGCATATTTTACTTTTTCATTTGTTTTGTAAGTTTAAGGCGCTATCTGAGCCTTAACCGTTTCTCATATGCTACAGGAACTTGTTTGCATCCTCTATG GATGGCAATAGCTTGTAAGTTTTTCTGTCAAGCTAAATTTTTTAGGTACATGTTGCATTTAGGTTATTGTTTGCTCATTTGCTCTTCCCCACTTTCTTAT TTTCTCAGAGGAAACATTTCATGTTTGGCAAATTATCACTGTCCTAAAAGTAAGTTGAGTTATCATGGTTTCCTTATAGACTTACCGTAACATTTGAACC TTTTATTTTTAATGTATTTATTATATATTTTTTGAGTTTGAAATACAAGGAAAAGTATATTATCTTTTTATAGCGTATTTTATAACAATTATTGATTCTT TTAGTTACTCACATAATCTGTTTTCCCAGCCTTGTACTCTCTCTATATAAATTGTGGTGGAAGGCTCGTAATTTCTAATGGAAGCAAGACATATGATGAT GATTCGAGTGAAATGGGACCAGCAAGATTTCGTCAAACCGGAATGAACTGGGCAGTTATCACTGCTGGTCACTTCTTCGATAGTGGTCGCTCAGACTACT ATACATGGTCTAATACAACTAAGCTTCTTGTGGACAATGCTGAACTATACATGGATGCTCGTGTTTCTCCCGATACTTTGACTTATTATGGATTTTGCCT GGGAAATGGAAACTACACAGTGAATCTCCATTTTGCAGAAATAATGTTC BLAST |
| Tissue | pods |
| Gene name | LI_gene_188631; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_397972
| Blastp | Probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840 from Arabidopsis with 54.44% of identity |
|---|---|
| Blastx | Probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840 from Arabidopsis with 54.44% of identity |
| Eggnog | leucine Rich Repeat(COG4886) |
| Kegg | Link to kegg annotations (AT3G14840) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019443851.1) |
| Pfam | Leucine rich repeat (PF13855.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |