Ll_transcript_397570

• Id Trinity: TRINITY_DN51929_c1_g1_i1
• Name Transcript: Ll_transcript_397570
• Sequence: CCAAATTCCACTCAACACATTATTTTTCACTCTATGGCCCTCTCACCACCCTTTGTCTCCTTCTTTTTCCTCACTTTCACTCTCACTCTCCATTCTCAAC CACTACCACCACCACCACCATTTGCATGTGATTGGTCCAACCCTTCCTCAAAATCATTTCCATTCTGTAACCCCAACCTCTCCATACTTGAAAGAACCAC AGACCTTGTCTCCAGGCTCACATTGGATGAGAAACTCGCTCAGCTCGTAAACTCAGCCCCTCCGATTCCAAGACTCGGCATTCCAGCTTATGAGTGGTGG AGTGAAGCACTTCATGGAGTTGCAAAGAGTCGTGGCATTAATTTCAGTGGAGCTATATCTTCTGCAACTAGCTTCCCTCAAGTTATTCTCACTGCTGCAT CCTTTGATTCTCACCTATGGTACAGTATCGGTTTGGCCATTGGAATTGAAGGGAGAGCAATATACAATGGTGGTCAAGCTATGGGGATGACATTTTGGGC TCCAAACATTAACATATTCAGAGACCCAAGATGGGGGAGAGGACAAGAAACAGCGGGTGAAGATCCATTAGTAACTTCAACATATGCAGTGTCCTTCGTG AGAGGACTTCAAGGTGATTCATTTCATGGAGGGAAGTTGATGGGTCATCTTCAAGCTTCAGCTTGTTGCAAGCATTTTACTGCTTATGATTTGGATAATT GGAAAGGTGTTAGTCGCTTTGTCTTCGATGCTCGTGTTAGTTTGCAAGACTTAGCAGACACATATCAGCCACCATTTAAGAGTTGCGTGAAGCAAGGAAG AGCTAGTGGGATAATGTGTGCTTATAATCGTGTCAATGGGGTCCCAAGCTGTGCAGATTTCAATCTCTTAACCAAAACTGCTAGAGAAAAATGGGATTTC AATGGGTACATTGCGTCGGATTGTAATGCAGTAGCGATCATACATGACCAACAAGGATATGCAAAATCACCAGAGGATGCCGTAGCCGATGTTCTTCGGG CTGGGATGGACTTGGAATGTGGTAATTATTTGTCAAGCCATGCTAAATCTGCAGTATTGCAGAAAAAAGTACCTATATCTGAAATAGACCGTGCCCTTCA TAATCTATTTTCTATTAGAATAAGGCTAGGCCTATTTAATGGAAATCCAACCAAACTCTCATTTGGCATGATTGGCCCCAACCATGTTTGTTCCAAAAAG CACCAATATCTTGCACTTGAAGCTGCAAGAAGTGGCATTGTCCTTTTGAAGAACTCTGATGCACTTCTCCCACTTCCAAAAACAAACCCTGCTATTTCCC TGGCAGTGATAGGTCCCAATGCCAATGATTTCACAACTCTTGCAGGAAACTATGCTGGCCCTCCTTGTAGAAATATGACAGTATTGCAAGGTTTACATCA CTATGTTAAGAACACTGTTTTTCATCCTGGCTGTGATGGTGGACCGAAGTGTCCTACTGCTCAAATAGAAGACGCGGTGGAAGTCGCAAGGAAAGTTGAT TATGTGGTACTGGTTATGGGGTTGAATCAAAGTGAGGAGATGGAAGAACTCGATCGCGTTCAACTTGACTTGCCAGGCAAGCAACTAGAACTTATCAATT CAGTTGCTGAAGCTTCTAAAAGACCAGTTATTTTGGTGCTCCTTTGTGGAGGTCCTGTAGATATCACTTTACCCAAGTATAATCACAAAATTGGAGGCAT CCTTTGGGCTGGTTATCCCGGGGAACTTGGAGGCATAGCACTTGCACAAATTATATTTGGTGACCATAACCCAGGAGGAAGATTACCAGTTACTTGGTAT CCAAAAGATTACATCAAAGTACCAATGACAGACATGAGAATGAGAGCTGATTCATCATCGGGGTATCCAGGGAGAACTTACAGATTTTACAAAGGTCCAA AGGTGTATAATTTTGGCTATGGCTTAAGCTACTCAAAATATTCCTATGAGTTTGTTTCTGTGACACATGACAAGCTTCACTTCAACCAATCATCCACTCA TTCGACGATGGATGAAAATTCAGAAACCATAAGGTACAAACTAGTTTCCGACTTGGGCGACGAAACATGCCAAAGCAAGATGGTTTCAGTGACTGTAGGA GTTAAAAACCATGGGAGCATGGTGGGGAGGCATCCTGTGTTGCTATTCATGAAGCCTGGAAAACACAGAAGTGGAAGTCCTATGAAACAGTTGGTGGGTT TTGAGAGTGTGTTGCTTGATGCAGGGGAAAGGACTCAAATTGAATTTGAGTTAAGCCCTTGTGAGCACCTTAGTAGAGCAAATGAGGCTGGTTTAATGGT AGTAGAAGAAGGGTCTCATTTGTTGCTTGTGGGTGATGTAGAGTACCCAATACATATCATTATGTGATACTACTCAGTTATTCTTCAATAAGGTAAAGCT TATTTTGTGGCAATCTGTTTATGGAACATGATTTACTAAGGGGTTATGACATGGATACGTGTATTATAAACGGGTTAATTCTAAATAACGAAACATTATT CAAGTATTTTGCATCTGAAAGCTGGTCATTTTTTTATGTTGGCCAGCAAAACCTGGTCAGTGAATTAAACTTAATGCATCAATCATCATGTAATAAAATT CTTGCCATTTTTTATTTGTATTAAGAGTGTAAAATGTATAACTGATAGTGTAAAGATTTATATACATGCACTCTATCATCCACCATTCATTTGAATTACC TTTTCTGAAAAGTCAACAATAATTAAAAATCAATGGTGATGATGTAATGACAGTGTATAAAACTCATACACTACCAGTGC
• Tissue: pods
• Gene name: LI_gene_188668;
• Additional information: details;

Expression of Ll_transcript_397570

FPKM

• PAB: 1.1
• PNAB: 14.6
• PS1: 25.7
• PS2: 30.3
• PS3: 66.9
• PW1: 8.9
• PW2: 11.6
• PW3: 4.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_397570

• Blastp: Probable beta-D-xylosidase 7 from Arabidopsis with 64.67% of identity
• Blastx: Probable beta-D-xylosidase 7 from Arabidopsis with 64.62% of identity
• Eggnog: hydrolase family 3(COG1472)
• Kegg: Link to kegg annotations (AT1G78060)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019417348.1)
• Pfam: Glycosyl hydrolase family 3 N terminal domain (PF00933.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;