Ll_transcript_397571

• Id Trinity: TRINITY_DN51929_c1_g1_i2
• Name Transcript: Ll_transcript_397571
• Sequence: CCAAATTCCACTCAACACATTATTTTTCACTCTATGGCCCTCTCACCACCCTTTGTCTCCTTCTTTTTCCTCACTTTCACTCTCACTCTCCATTCTCAAC CACTACCACCACCACCACCATTTGCATGTGATTGGTCCAACCCTTCCTCAAAATCATTTCCATTCTGTAACCCCAACCTCTCCATACTTGAAAGAACCAC AGACCTTGTCTCCAGGCTCACATTGGATGAGAAACTCGCTCAGCTCGTAAACTCAGCCCCTCCGATTCCAAGACTCGGCATTCCAGCTTATGAGTGGTGG AGTGAAGCACTTCATGGAGTTGCAAAGAGTCGTGGCATTAATTTCAGTGGAGCTATATCTTCTGCAACTAGCTTCCCTCAAGTTATTCTCACTGCTGCAT CCTTTGATTCTCACCTATGGTACAGTATCGGTTTGGCCATTGGAATTGAAGGGAGAGCAATATACAATGGTGGTCAAGCTATGGGGATGACATTTTGGGC TCCAAACATTAACATATTCAGAGACCCAAGATGGGGGAGAGGACAAGAAACAGCGGGTGAAGATCCATTAGTAACTTCAACATATGCAGTGTCCTTCGTG AGAGGACTTCAAGGTGATTCATTTCATGGAGGGAAGTTGATGGGTCATCTTCAAGCTTCAGCTTGTTGCAAGCATTTTACTGCTTATGATTTGGATAATT GGAAAGGTGTTAGTCGCTTTGTCTTCGATGCTCGTGTTAGTTTGCAAGACTTAGCAGACACATATCAGCCACCATTTAAGAGTTGCGTGAAGCAAGGAAG AGCTAGTGGGATAATGTGTGCTTATAATCGTGTCAATGGGGTCCCAAGCTGTGCAGATTTCAATCTCTTAACCAAAACTGCTAGAGAAAAATGGGATTTC AATGGGTACATTGCGTCGGATTGTAATGCAGTAGCGATCATACATGACCAACAAGGATATGCAAAATCACCAGAGGATGCCGTAGCCGATGTTCTTCGGG CTGGTATGGTGGGACCTAAACCTCTTGTTATCTTTTGTTCTTATGCTTTATGTGATAGTCATGATAATAATCATACTCTTAAATCTTAGGTTATATAATT GAGTTCATAGAGTGCAAAGGGTAATCAATCACTTATTTGTATATTCCTTGAAGTTTTTGTCACTTACCTATTGTCCAGTTTACATAGCTTTCATATTATC TGTCAGCCTGTTAGTAGCATGAAGTCATGGATGGCTTGGCCCACACCTACAATTGCCTGCCAGCCATTACTAAGGTCTCTCCGGAATTAAATCTCACTTC GCCTATTTCATCATCTCGGACGTAATATAAATATCTGTAGACTATTTCTTTTATTTCCAATCTTAAAATGGAAAGTAACACATTTTTACATTTTTTTCTT TGTTCCTTCTTATGGTGCTAATACAATTTTATAACTATACGTGGAAGTGTTTTTTTCTTCTATCAATTTTCTGCTTACCATTCTTTGTTCCTTATTCATG TAATAGTCCATATGTCTTTCTTTTTCGCTTTACCAATCAATTGTGAGGACCCCAATGAAGTGTGAAGACTTTCTTTCAGCTGGTATTTCACCCAGCTGTG CCACACTGCCTTTTTTGCCTTAGGTATAGATACAGTTACACTTATTCATCCAGCTGTGTCACACTCACTTTTAGGCTTAGGTATAGGAACAGTTACACTT AAAACAGTAAGCTATTTATAGAAGAGTATAAAATTTATAGATCCGACTCTTTAAGATTTTTTTACATTATAGATCATATCATTCATATGTATTGTTTTTA TTAAATAATGTGGATGAAGTTAAGCTAGTCTAGTCTAGTGGTGAAGTTGCTGCCACACCCTCACAGATGGAATGAATGTGATTTTATTCGGAAAATTCAG GCTTCTAATATTGACCTGGGTAATATAATCAAATAATCCCATTTTTGGAAAATGACACTTTGTTAGTTTGTTTTAATAATAAGTTGATCCAATATGGTAA AACACATCATAACTACTACCAACTTGGTTAAAAAATGCTGTTAGCTGAAAAAGAAAAGCCACTTAGATGAAAATAAGAGGGCTAGTGCAGTTTACAGGAG AAAAAATGACTACTTTCTGAATTCTGTAACGTTTAATGGTACTGCAATAACTAGTAGTAAGATGGGTCTTGAAGTTTGTGTTTTAATATTTTGCAGGGAT GGACTTGGAATGTGG
• Tissue: pods
• Gene name: LI_gene_188668;
• Additional information: details;

Expression of Ll_transcript_397571

FPKM

• PAB: 0
• PNAB: 0.2
• PS1: 0.1
• PS2: 0.2
• PS3: 0.4
• PW1: 0.2
• PW2: 0.3
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_397571

• Blastp: Probable beta-D-xylosidase 7 from Arabidopsis with 73.09% of identity
• Blastx: Probable beta-D-xylosidase 7 from Arabidopsis with 73.06% of identity
• Eggnog: hydrolase family 3(COG1472)
• Kegg: Link to kegg annotations (AT1G78060)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019417348.1)
• Pfam: Glycosyl hydrolase family 3 N terminal domain (PF00933.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;