Id Trinity | TRINITY_DN51929_c1_g1_i4 |
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Name Transcript | Ll_transcript_397583 |
Sequence | CCAAATTCCACTCAACACATTATTTTTCACTCTATGGCCCTCTCACCACCCTTTGTCTCCTTCTTTTTCCTCACTTTCACTCTCACTCTCCATTCTCAAC CACTACCACCACCACCACCATTTGCATGTGATTGGTCCAACCCTTCCTCAAAATCATTTCCATTCTGTAACCCCAACCTCTCCATACTTGAAAGAACCAC AGACCTTGTCTCCAGGCTCACATTGGATGAGAAACTCGCTCAGCTCGTAAACTCAGCCCCTCCGATTCCAAGACTCGGCATTCCAGCTTATGAGTGGTGG AGTGAAGCACTTCATGGAGTTGCAAAGAGTCGTGGCATTAATTTCAGTGGAGCTATATCTTCTGCAACTAGCTTCCCTCAAGTTATTCTCACTGCTGCAT CCTTTGATTCTCACCTATGGTACAGTATCGGTTTGGCCATTGGAATTGAAGGGAGAGCAATATACAATGGTGGTCAAGCTATGGGGATGACATTTTGGGC TCCAAACATTAACATATTCAGAGACCCAAGATGGGGGAGAGGACAAGAAACAGCGGGTGAAGATCCATTAGTAACTTCAACATATGCAGTGTCCTTCGTG AGAGGACTTCAAGGTGATTCATTTCATGGAGGGAAGTTGATGGGTCATCTTCAAGCTTCAGCTTGTTGCAAGCATTTTACTGCTTATGATTTGGATAATT GGAAAGGTGTTAGTCGCTTTGTCTTCGATGCTCGTGTTAGTTTGCAAGACTTAGCAGACACATATCAGCCACCATTTAAGAGTTGCGTGAAGCAAGGAAG AGCTAGTGGGATAATGTGTGCTTATAATCGTGTCAATGGGGTCCCAAGCTGTGCAGATTTCAATCTCTTAACCAAAACTGCTAGAGAAAAATGGGATTTC AATGGGTACATTGCGTCGGATTGTAATGCAGTAGCGATCATACATGACCAACAAGGATATGCAAAATCACCAGAGGATGCCGTAGCCGATGTTCTTCGGG CTGCCTGTTAGTAGCATGAAGTCATGGATGGCTTGGCCCACACCTACAATTGCCTGCCAGCCATTACTAAGGGATGGACTTGGAATGTGGTAATTATTTG TCAAGCCATGCTAAATCTGCAGTATTGCAGAAAAAAGTACCTATATCTGAAAT BLAST |
Tissue | pods |
Gene name | LI_gene_188668; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_397583
Blastp | Probable beta-D-xylosidase 7 from Arabidopsis with 72.67% of identity |
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Blastx | Probable beta-D-xylosidase 7 from Arabidopsis with 72.64% of identity |
Eggnog | hydrolase family 3(COG1472) |
Kegg | Link to kegg annotations (AT1G78060) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019417348.1) |
Pfam | Glycosyl hydrolase family 3 N terminal domain (PF00933.20) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |