Ll_transcript_398977

• Id Trinity: TRINITY_DN51930_c0_g2_i6
• Name Transcript: Ll_transcript_398977
• Sequence: GAGATACTTGACAAAAGAGAATCGTAAAAAAAAAAAAAAAAAAAGAGAGAGAAATATATAAGTTTTAATACGAAGGAGTGAGTTGAAAGAAAGAAGTGGA AAATGGCGCTGAGAAAAATTCTTCGGCATTCCTCTTCCATCGCCAATCTCTACTTTCCATCAACGCCTCTCTCTCTCTCTTTCTCTAACCGCTTTTCTTC TTCTTCTTCTTCTTCTTCTGAAACCCTAAATTCTGAAACCCCCACTTCTTCTATCTCCATCGATCGCTCTTCCCTTTACAACCCTCCCGATCATTCTCAT CTCCCAAATTCCGATTCTGAACTCTCCAAACACCTCAAAGGCATCATCAAGTTTCGTGGAGGCCCAGTTTCAGTAGGTGAGTACATGTCACAAGTTCTGA CAAACCCTAAATCTGGATACTACATCAACCGCGATGTTTTTGGAGCTCAAGGTGATTTTATTACATCCCCTGAAGTTAGCCAAATGTTTGGTGAGATGGT TGGTGTTTGGGTAATGTGTCTATGGGAGCAAATGGGTCAACCACAAAGACTGAATCTTGTTGAGATGGGTCCAGGACGAGGAACTCTTATGGCTGATCTT CTCCGGGGTGTTTCAAAATTTAAGAAATTGGTTGAGTCATTGGATATTCACATGGTGGAGTGTAGTCCGGCACTACAGAAGATTCAGCACCAAAAGTTGA AATGTGTCGATGAAGAAAATGCAGCTCAAGATAGTGATAAAAGAGCTTTAAGCTTTTTGGTTGGAAGTCAAATTCCTGTGTCATGGCATGCTACGATGGA GCAGGTTCCTTCAGGATTGCCAACAATTATTATTGGACATGAGTTCTTTGATGCCCTACCTGTTCATCAATTCCAGGTAATAGAATGCTCGTGCTGTTAA AACTCAATTGAAACTGAAAACATCTATCAAGCAGCACACTTAAGTTTTGCCTGTTGTTTCCATTTTTATTGGCAATTTCTGTATTGTTTTGCCTGTTGTT TTCATTTGAGTTAATCCGCTTAGCTATTTTTACAAAGTGAGTTCATTCCAATGTTGATCTGTCATAACTATATGCTCTCGTACTGGTTGGTCATTTAGGG GCTGACCAGATGTTAGAGGTCCTCAATGCTTTCAGCCAAAATACTTGCTTATCTTCATGCTTAATGATTCCATATTTCCAATAATTTTCTGCTTCACATA TCATGGGTTTGTCAAACAATCTCTGCCTTGTTCTTTAATTTCCATTAGATTAGAGTAGGCTATGTCATGCTCGTATCTTATGTAGTTGTTGCGAAGAAGA AAATGAAATCCAACTTCTTTTGTGTTCTTACCTTTTCTACATTGGTATTGGCATCACATTTTCATGAAATAATTTTTTTGTCTGCAGAAAGTATCTCGTG GCTGGTGTGAGAAAATGGTTGATGTGGCAGAAGATTCATCGTATGTATTGCAATGAAGCTTCTTGAAATTGTATTTCTGCTGGGTTCACTTTATTGATGT TTCTTATGTATATGGGATAGGTTTCGTTTTGTTCTTTCTCCACAGCCTACACCTGCAACTCTATATCTATTGAAGCGGTGCAAGTGGGCTGCACCTGAGG AGATTGCAGAACTTAATCAAATTGAAGTTTGCCCCCAGGCAATGGAGTTAACTGAGACCATCGTCAATAGAATAAGTTCTGATGGTGGTGGAGCTCTAAT CATTGACTATGGCTTTAATGGAGTAATCTCAGACAGTCTCCAGGTCTAGCACCCTTTCTCCTTTTATCGTTAACAGTATTACTTTGTCATTTTACTTTTT CTGCCTGACTGTCCCACAAGTATACCATCACTAGCTTAACCACTCATTGAATGTATCCTAGTTTTGTCTTGTACTACTGCAAAGTTATTAACATAAGCAT GACATAATTTCATTTATGATAAAATTGGTAAACGTGATGGTAATAATTCTCACTATCCCTTAGTTGGAGTATACCTTATTGTCTGGATGAATGTTTGTGT TACACGACCAGCTGTAAGACATAATACACATGAGAAAGAAGCTTGCAAAGGGAAAGGATAGGCCTAACACTAATTTTGGCCCCGCAGTAGCTGTTGGGAA TGGATGGTTTGAAGCCTAACACTAATTCTCAGCCAGCAGCAGCTGAAGTTGGAAGGGATGGTTTGGGAAAAGTAAACAGGAGTTAGTTATGCAAACGACC GTTGGCAACAAGAGAGTGGAGAAGTAATGAATTCCTTTAAATCAGAGGTCTATCTCTGCACTTCAAGGAACTAGTTTCCAAATATTACCAGTTGCATTTC AGTCCTTAAGAAATTGGAATTTGTAGAACATAGAATCGGGACAGAATCACGCTTACAATCTCTCTTTCTCTTATACTGCCATTTGCTTGTGAATTTGTAG CAAATGCTGCCACTGGAATCTATTGCACACGGTTAGGGACCAACCATTACATGCAATGTTGTAAATAGTGTCATCCTGAGGATTAAGTTGCGGTGTAGTT TTATTTAGTGGTTATAGTTATGAATTTTGTGTTGGTTACAGTACCACCGAGAGTCCAATGCCTGAGTTTATCTTTTAATTGGATGTGGTACATTGTATTT TGTTAGTCCTTCCTCTGCATGCTTTGTTCAATGTTTTATGAATTTATGCAGGCAATTCGGAAACACAAGTTTGTCGACCTTCTAGATGATCCTGGATCTG CTGATCTCAGTGCATATGTTGATTTTCCTTCCATTAGGCATTCCGCAGAGGAAGCTTCAGGAGAAGTGTCTGTCCACGGGCCAATTACTCAATCTCAATT TCTTGGTTCGCTTGGAATAAATTATCGTGTTGAAGCACTCCTTCAAAATTGCACAGAGGAACAAGCTGAATCTTTGAGGACAGGATACTGGCGCCTTGTA GGTGATGGTGAAGCCCCCTTTTGGGAAGGACCTGATGAGTGTGTTCCAATTGGTATGGGTACCCGCTATAAGGTAATGGCTATAGTGAACAAGAAGCAAG GTGTTCCAGTTCCTTTCGAATAAGGCTTAATCAAATGTAGAAGCAATTGAAACTTTCCTCAAAGCAGAGTTGGTTTTTAGGCGCGTGTCACGATAGAAGA ACCATTCAGTGGTTGGCATTTCCAGTTAGTTGATGTTTAGGTTTCCAGTTACTGGATCAGTGGTTGGTTTTCCATTTCTTAACATTTTTTCCTTTCCTTA GAAAATGGGTTTTTAGTAGCTTTATGTTTTGCTCTTATTTAGTTGCATATTTGTAACGTTCTCTTATTCAGGGGAGAAGATTTGTAGGCCATATATAAGC ACCACTAATTTGTAAACTCTTCATAGGACTTGCAATACTCTGGTCTTGGTATCCCCTTTAACATTTTGCCAATAAAGTATTCATTTGTGCAAAGGAAGGA TAATGTTTTTCCTTTTCATTTGAATCAACAATGTATTCTGTTAGGGGATGTGAATCCCAGAGATATCTATAAACTTGTTACATTATTTCCTTTCAAAAAA AA
• Tissue: pods
• Gene name: LI_gene_188682;
• Additional information: details;

Expression of Ll_transcript_398977

FPKM

• PAB: 0.2
• PNAB: 0.3
• PS1: 0
• PS2: 0
• PS3: 0.1
• PW1: 0
• PW2: 0
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_398977

• Blastp: Protein arginine methyltransferase NDUFAF7 homolog, mitochondrial from Dictyostelium with 46.23% of identity
• Blastx: Protein arginine methyltransferase NDUFAF7 homolog, mitochondrial from Dictyostelium with 46.23% of identity
• Eggnog: NADH dehydrogenase ubiquinone complex I, assembly factor 7(COG1565)
• Kegg: Link to kegg annotations (DDB_G0282615)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019454282.1)
• Pfam: Putative S-adenosyl-L-methionine-dependent methyltransferase (PF02636.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;