Ll_transcript_398991

• Id Trinity: TRINITY_DN51930_c1_g3_i1
• Name Transcript: Ll_transcript_398991
• Sequence: GATATCTTTCCAACACGCAATCTACTCACGGTAGTTCCAGCATAAAAGTATATCAGGTCCACTCAATGCGCACATCAGGGTCCACCCAACACGCAAGCTA CTCACGCTAATATCATGAAAAAATACACCTAAATAGAATTAATGCATGCATGAAAGTTTTGCTCAAAGTCGTATTGACGTCTCCAACACGAAATCTAGTC ACGATAGTTTCGACACATCAACACATATAGGTCCACCGAATACAAATCTAAACAACACTTGTTATGTGTTTTAGGACTCAAACTCATACAATATTATTAG ATACATATCATTTTTATGTTTTTTAATAAAAAATTCCATTAATATATATTTCTTTATGGTAGGATAATCAGTTATAGGCAATGTGAGAGTAAATGAAGAC GAGTATAGCCAGTAAGTCAGAATGGTTAAAAGTTAACTACGGTTGAAATAATAGCACATTATATTGATCACAACATAACACTCTATGCTTAAGTGTATCT ATTTAAGATAGTCTTTCGGTTTCTGGTCCGACAACCATTTCCTCTGCTCCTTGTTAAGAGAGAGAAATAAAAACATAGACAGAGAGAAACTTAGAGACAA AAAGAGAGTGATTGAAGAAAAGGGTTATTGTAACACCGATTGAAGTAGTATAAAGAGATATAGAGAAGGGTTGTAGGAATTAGTTCTTCATTTCCCTCAG AGAATTTTGCGTAGAAAAAGATAAGGAAGAGTTTTTTTTCTTATGCGAGTGTGTGGATGAGAGATCGGAGAAAGAAAGAAGAACAAATAACGTCATATTC AGATATAGCAATGACCAGAATAGGAAAAATCATCAACAACAACACTAGTGGTGGAGGGGAAGGTCAAAACGAAGCAGAGCAAGCACTTTTTAGAGAGTTA TGGGGTGCATGTGCGGGTCCCCTTGTAACCGCGCCAAAAAAAGGGGAGTGTGTGTTCTACTTTCCTCAAGGCCATCTTGAACAGGTTGAGGCCTCAACAA GTCAGGCAGTGAATGAGCACATGCCTATGTATGACCTACCCTCCAAGATTCTATGTCGGATCATGAATGTTGCGCTCGAGGCAGAGCCAGACACGGATGA CGTGGTTGCTCAGGTTACCTTAGTCCCGGAGCCAATTGAAGATGAGAATGAAGTTGAAAATATGCCGCCACCAGCACCCCTGCAAAGGATTCATGTGCGT TCATTCTATAAAACCCTGACTGCCTCTGATACCAGTACTCATGGAGGGTTTTCTGTGTTGAAGAGACATGCTGATGAATGCCTTCCTCCTTTGGACATGA CACAGGAGACACCTACTCAGGAATTGGTGACCAAGGACTTGCATGGGAACGAATGGCGATTCAAGCATGTCTATCGTGGTCAACCGCCCAGGCACTTGTT TCAAAGTGGTTGGAGTGTTTTTGTGAGCTCAAAGAGGTTGGTTGCTGGGGATGGATTTATATTTTTAAGATGTGAGAATGGGGAACTTAGAGTTGGTGTC AGACGTGCAATGAGGCAACAAAGTAATGTTCCATCGTCGGTTATCTCTAGCCACAGCATGCATCTCGGTGTACTTGCAACTGCTTGGCATGCTGTCTCCA CTGGGACAATGTTCACTGTTTATTATAAACCTAGGACCAGTCCCACTGAATTTATTGTTCCATATGATCAGTACATGGAGTCTCTCCAAATTAATTACAC CATAGGAATGCGGTTTAAAATGAGGTTTGAAGGTGAAGAGGCTCCAGAGCAAAGGTTTACTGGTACAATTGTTGGAATTGAAGATGCTGACCCTAAAAAG TGGCCTGATTCCAAATGGAGAAGTCTCAAGGTTAGATGGGATGAAACGTCTACCATACCTCGTCCTGATAGAGTTTCTCCTTGGAAAATAGAGCCTGCTC TTGCTCCTCCAACTCTAAATCCTCTTTCAATGCCTAGACCTAAAAGGTCTCGGCCTATAGTGGTTTCACCATCCTCAGATTCATCTGTTCTTACTCGAGA AGGAGCGTCATCTAAAGTGAGCGAAGACCCTTTGCCTGCAAGTGGATATCCAAGGGTCTTGCAAGGTCAAGAATTGTCGACCTTGAGAGGCAACTCGGTA GACGGCAACAAGTCTGACACTGTC
• Tissue: pods
• Gene name: LI_gene_188686;
• Additional information: details;

Expression of Ll_transcript_398991

FPKM

• PAB: 4.8
• PNAB: 6.5
• PS1: 7.8
• PS2: 12
• PS3: 10.6
• PW1: 7.4
• PW2: 6.9
• PW3: 8.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_398991

• Blastp: Auxin response factor 2B from Lycopersicon with 75.93% of identity
• Blastx: Auxin response factor 2B from Lycopersicon with 77.43% of identity
• Eggnog: auxin response factor(ENOG4110RNJ)
• Kegg: Link to kegg annotations (101249712)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019463463.1)
• Pfam: B3 DNA binding domain (PF02362.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;