| Id Trinity | TRINITY_DN51930_c1_g4_i2 |
|---|---|
| Name Transcript | Ll_transcript_399000 |
| Sequence | AGTTTCCCAGTGGAAAATAGAGCCTACTCTTGCTCCGTCACCTCTGAACCCTCTTCCAATGCCCAGGCCTAAAAGGCCTCGGCCTAATGCAGTTCCATCA TCTCCCAGTTCTTCAGTTCTTCCTCGAGAAGGTATGGTATTTCATGTTTCTATGAATCCTTTGCAAAAATATTTGTTGTTCAAGTGAAGCCTAAGATGTT TTAGGTGATTTAACAGCATTACCTAAAGTTAGCATACACCCTTTACCAACAAATGGATTCCCGAGGGTTTTGCAAGTTCAAGAACTCTCCACCTTGAGAG GCAATTTTGAAGTAAGCAATGAGTTTGATACTGCCGAGAGGTCTGTTGCCCTGCCACCTGCAGTAGAAGATGAAAAAATTGATGATTCTACTTTAAGAAG GCATGGATCAGAGAACTGGATATCAATGGGGAGGCATGAGCCAGCATATTCAGATCTTCTTTCAGGATTTGGCACTAGTGGAGACCCCTCCCATCAATCA TTGGTTGATCAAATTTGCCACTTACCTTATCCTGCAAGTAAGCATTCCTTGGATCACGAAGCCAAACTTCACGTGCATCACCCATGGCCTGTAATGCCCT CTAGTCTATCACTAAACTTCCTGGACTCTAATTCAAAAGACTATGCACATGTTCATACCACTTACCAAGCCAGAGGGAAATTGAGGTGCAGTACATTTAG TGAAAACTTGATTCAACCCCCACCCCCAACTCAACATGAGAGTCTTACTTTAAGAGAGCTTATGTATAAGCCAATGTCTGTGAAAACTAGTGAGGCTATG ATACTTAAAGATGATGACTGTAAGCTATTTGGCATCTCACTTATCACTAGCGCCATTGCACCAAAGAATTCACTTCATGATGCTGGTCTAATGCATCTTA TATCACACCAGCCACAAAGTTCTGAAAATGAACAGATGTCTGAACAGTCGAAGAACTCAAAACCTTCAGATAGTCTAGTTGTCATCGGTGATCATGAACA GTCAAAACTTGTTCAAGCCAAACCATTCTGTGTTTCTGCCAGGAGTTGCACCAAAGTTCACAAGAAGGGTATTGCGCTTGGTAGATCAGTCGACCTTGCG AAGTACTGTGACTATGATGGATTAATTGCCGAATTGGACCGGCTGTTTGAATTTGGAGGTGAATTAATGTCGCCAAACATGGATTGGCTTATTGTGTATA CTGATAATGAGGGTGATATGATGCTAGTTGGTGATGATCCATGGCAGGAGTTCTGTGCCATGGTTCACAAAATATATATCTACCCTAAAGAGGAGATCCA GAAAATGAGCCCTGGGACCCTGTGTTCAAACAATGAAGATAATCATTCAGCTAGCGAATGTGCAGAAGCAAAAGAAGTTAAAAGCCAACT BLAST |
| Tissue | pods |
| Gene name | LI_gene_188687; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_399000
| Blastp | Auxin response factor 2A from Lycopersicon with 43.14% of identity |
|---|---|
| Blastx | Auxin response factor 2 from Arabidopsis with 41.39% of identity |
| Eggnog | auxin response factor(ENOG4110RNJ) |
| Kegg | Link to kegg annotations (778240) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019417429.1) |
| Pfam | AUX/IAA family (PF02309.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |