Ll_transcript_397157

• Id Trinity: TRINITY_DN51931_c1_g1_i10
• Name Transcript: Ll_transcript_397157
• Sequence: GTCAGAGTTGGAGTTGTCGGTGCTGCTGAGTTGTCAAATGTGTGTAAAGACAACAAACACTGTCAAAAAACAAAGTCTATTCCTTTCTTCCATAACCATA ACCAATCAATTTCACACTCTCACACATCTTTTCTTTCTTTTCATTTTTCTCTCTAACAATTTCTTTCAAGTGAAGGGAGTCACTTTTTTGATCTGATAAC CTAAGCTGGCGACCACACTCACTTGGCCAATGTTTGCTCCTCATGATATGGAAAGAAATGGTGATGGGAAGATTCATGATTCAGACTCTTCAGTTCCCCA TTCTGCTCTGAAGATGGGATTGAGAGAACGCAGCAGCAGCAACATGGAGGATCCAGACGGGACATTAGCAAGTGTTGCCCAATGCATTGAGCAGCTGCGT CAGAGCTCATCTTCTGTGCAAGAGAAAGAGCATTCATTGAAGAAGTTATTGGAGCTTATTGATATGCGTGAAAATGCTTTCAGTGCCGTTGGATCTCACT CTCAGGCAGTTCCAGTACTTGTGTCCCTTCTCCGGTCAGGGTCATTGAATGTGAAGATACAAGCAGCAACTGTATTGGGCTCCCTTTGTAAAGAAAATGA GCTAAGGGTGAAAGTATTACTTGGAGGATGCATTCCTCCATTGCTTGGTCTGCTCAAGTCAAGTTCAGCTGAAGGTCAAGTTGCTGCTGCGAAGACTATA TTTGCTGTGACTCAAGGTGGTGCCAGAGACCATGTTGGATCAAAAATCTTTTCAACTGAAGGAGTTGTGCCGGTGCTCTGGCAGCAGCTGCAAAAGGGCC TCAAGAATGGAAATGTAGTTGATAGTTTATTGACTGGAGCGTTGAAAAATCTCTCCAGCAGTACTGAAGGGTTCTGGAATGCCACAGTACAAGCTGGAGG AGTGGACATACTAGTGAAGTTACTGACAACGGGACAGTCTAGTACTTTAGCTAACGTGTGCTTTTTACTTGCCTGTATGATGATGGAGGATGCATCTGTG TGTTCAAAGGTGTTGGCAGCAGAGGCAACAAAACAACTCCTCAAACTTTTAGGCCAAGGTAATGATGCCCCTGTTAGAGCTGAAGCAGCTGGTGCTCTTA AATCTCTCTCTGCCCAGAGCAAAGATGCAAGGCGGGAGATATCAAATTCTAATGGCATTCCTGCTTTGATCAGTGCTACCATAGCTCCTTCCAAGGAGTT CATGCAAGGTGAATATGCTCAAGCATTACAGGAGAATGCTATGTGTGCTCTAGCAAACATCTCTGGTGGTTTATCTTCTGTCATCTCCAGCCTTGGTCAA AGCCTTGAATCATGCACCTCACCTACCCAAAGTGCTGACACCTTAGGGGCTTTAGCTTCAGCTCTTATGATATATGATGACAAGGCAGAATCTACTAAGG CATCAGATCCGTTGGTAGTTGAGCAGACTTTACTAAAGCAATTTAAACCTCATGTACCCTTCCTTGTCCAGGAACGAACCATTGAAGCCCTAGCTAGTTT GTACAGCAACCCCATGCTCTCTATTAAGCTTGAAAGTTCTGATGCAAAGCGTTTGCTTGTTGGTCTAATAACAATGGCGTCCAATGAAGTGCAAGAGGAG CTTCTAAAAGCTCTCTTGACACTGTGCAATGGTGAAGGCAGTCTGTGGCGCACACTTCAAGGCCGTGAAGGAGTTCAGCTGCTGATATCTCTCTTGGGAC TTTCATCAGAGCACCAGCAAGAATGTGCTGTTTCCCTCCTTTGCCTTCTATCTAATGAAAATGATGAAAGCAAATGGGCCATTACAGCTGCTGGTGGTAT ACCTCCACTTGTTCAAATCTTGGAGTCAGGATCAGTTAAAGCAAAGGAAGATTCAGCAACAATCCTTAGGAACCTATGCAATCACAGTGAGGATATACGT GCTTGTGTTGAAAGTGCTGATGCTGTTCCTGCATTGTTGTGGCTTTTGAAAAATGGAAGCTCTAATGGGAAGGATATTGCAGCGAAGACCTTACATCATT TAATTCATAAATCTGATACTACGACTATCAGTCAGCTTACAGCATTATTGACTAGTGATCTACCTGAATCTAAGGTTTATGTTTTGGATGCTTTAAGAAG TATGCTTTCTGTTGCTCCTCTTAGTGACATTCTGCGTGAAGGTAGTGCTTCCGGTGATGCATTTGATACCATGATAGCATTATTGAGCTCTACCAAGGAA GAAATTCAGGCAAAGTCTGCATCAGCTCTAGCAGAAATTTTCAAAATGAGAAAAGATGTTCGTGAAAGCAGCATTGCTGTTAAAACACTTTTGTCAGCCA TCAAATTGCTTAACGCTGAATCTGAAAGTATCTTAGTGGAGTCCTCACACTGCCTGGCTGCAATATTTCTTTCCATCAAAGAGAACAGGGATGTAGCTGG TGTGGCCAGAGATGCACTATCCCCACTTGTTGCACTAGCTAACACTTCAGTTTTGGAAGTTGCAGAGATGGCAACATGGGCTGTGGCTAATCTTATTTTG GATAGTGGAACTGCGGAGAAAGTTGTTACTGAAGAAATTATCTTGCCTGCTACCAGAGTATTATGTGAAGGCACAATTTCTGGTAAAACCCATGCTGCTG CAGCAATTGCTCGCCTCTTACATTCTCGCAAAGTTGATGATGCTGTAACTGATTGTGTAAATCGTGCTGGAACTGTTCTCGCATTAGTTTCCTTCTTAGA TTCTGCTATTAATGAATCTGTGTCCACATCACAAGCTCTAGAAGCACTTGCCATTTTATCCAGGCCAGAAGAGACCAGTGCAAATATTAAACCTGCATGT GCAGTTTTGGCTGAAGTCCCTGAAAGCATATGTCCGATAGTCCTGTCAATTGTTCATTCGACACCCCTGTTTCAGGATAAAGCTATTGAGATATTATCCC AATTATGCAAGGACCAGCCTGTTATTTTAGGAGATACTGTTGCTACCGCCTCTGGGTGTATAACTTCAATAGCTAACAGGATAGTTAGTTCCACAAATGT AAAGGTCAAAATTGGGGGAGCTGCACTTCTTATTTGTGCTTCAAAGGCAAATCATCAGAGTCTATTTGAGGATCTCAATTTATCAACCTTATGCACTAGT CTTATTCAGGCTCTAGTTGATGTGCTTATTTCTGCACTGTCTTCTTCGGGCAATGAGGGTGATGACAGCAAGGAACTCATCAGCATATGCAGGCATACAA AAGAAGATGCCAACAGTGGTGAATCCAACACTGGCACTACCATTATATGTGGTCCCAACTTAGCTATATGGTTACTGTCTATTCTTGCTTGTCATGATGA GAAAAACAGAACTGCAATAATGGAGGCTGGAGCAGTTGATGTTCTTACAGATAGGATCTCAAATTGTGCCTCACAATATTATCAGATTGATAACAAAGAA GATGGCAGCAAGTGGATTTGTTCTTTGTTGTTAGCCATACTATTTCAAGATAGAGATATCATACGAGCACATGCAACCATGAAATCTGTACCAGCACTTG CCAATTTGTCGAGGTCAGAGGAATTGGCAGACAAATATTTTGCTGCACAATCAATAGCTAGCCTAGTCTGTAATGGTAGTAGGGGAACACTTTTGTCTGT GGCAAATTCTGGGGCAGCAGGTGGGCTTATATCCTTGCTTGGCTGTGCTGATACTGATATACAGGATCTTCTGGAAATGTCAGAGGAATTTTCTTTGGTC CGATATCCTGATCAAGTTTCTCTGGAGAGGTTGTTTAGAGTTGATGATATAAGAGTCGGTGCCACTTCTCGGAAGGCAATACCTGCCCTAGTTGATCTTC TCAAACCGATTCCAGATCGCCCAGGAGCACCATTTTTAGCACTTGGGCTTTTGATTCAGCTTGCTAGAGATTGCCCATCGAATAAGATTATAATGGTAGA GTCTGGGGCCTTAGAGGCCCTTACAAAGTATCTTTCACTGAGTCCACAAGATGCAACTGAAGAAGCTGCTACAGATCTGTTAGGAATTCTTTTTAGTAGT GCGGACATAAGGAAGCATGAGTCAGCATTTGGTGTTGTTGCTCAACTTGTAGCTGTCCTACGTTTAGGAGGAAGAGCTGCAAGGTATAGTGCTACTAAAG CCTTGGAAAGTTTATTCTCTGCTGACCACATTAAAAATGCAGAGACTGCTCGACAAGCGGTTCAGCCCTTGGTGGAGATACTCAATACTGGTTCAGAGAA GGAGCAGCATGCTGCAATTGCTGCATTGGTTAGGTTGCTGAGTGAAAACCCATCAAGAGCACTTGCTGTTGCAGATTTTGAGATGAATGCGGTGGATGTT CTTTGCAGGATCCTTTCATCTGATTGTTCAATGGACCTCAAAGCGGATGCTGCTGAATTATGTTGTGCTCTTTTTGGAAATACAAGGATTCGGTCCACGA TGGCTGCTGCACGCTGTGTTGAACCTCTAGTCTCTCTCCTTGTAACTGAGTCTAGTCCTGCTCAGCATTCAGTCGTTCGTGCATTGGATAGGCTTGTTGA AGATGAGCAACTGGCGGAATTAGTTGCTGCACATGGTGCAGTTGTTCCTCTTGTTGGCCTACTGTATGGTAGGAACTATATACTTCATGAGGCTGTTTCC AGAGCTTTGGTCAAGTTAGGAAAAGACAGGCCTGCTTGTAAAATGGAAATGGTGAAAGCTGGAGTTATTGAAAGCATACTTGACGCATTACATGAAGCAC CTGATTTTCTATGTGCAGCTTTCGCAGAATTACTGCGTATATTGACCAATAATGCTACCATAGCTAAAGGACCATCTGCTGCTAAAGTGGTTGAACCCGT GTTTTTGTTCCTGACAAGACAAGAAGTTGGACCTGATGGACAACATAGTGCACTGCAGGTTTTGGTTAATATCTTAGAACAACCACAGTGTCGTGCTGAC CATAGATTGACTTCTCACCAAGTTATTGAACCACTTATCCCCTTACTTGATTCTCCAATATCAGCAGTGCAACAGTTGGCTGCTGAGCTTCTTTCACATC TACTTCTAGAAGAACACCTTCAGAAGGATCCAGTAACACAGCAGGTAATCAGTCCTCTTATACAATGTCTTGGTTCTGGTATACACATATTGCAGCAGAG AGCTGTAAAGGCCCTAGTTAGTATTGCACTAACTTGGCCAAATGAAATTGCTAAAGAGGGTGGTGTTATTGAAATTTCAAAAGTGATATTGCAAGCTGAT CCTTACCTTCCTCACGCGTTATGGGAGTCTGCTGCATCTGTTTTGTCAAGTATTCTGCAATTTAGTTCTGAATTCTACTTGGAAGTGCCTGTTGCTGTTT TAGTAAGGCTGCTTCGATCTGGATCAGATGGCACTGTTCTTGGTGCTTTAAATGCTCTTCTAGTGTTGGAAAGCGATGATGGAACTAGTGCAGTAGCAAT GGCTGAAAGTGGTGCCATAGAGGCTCTCTTGGAGCTCTTAAGATCTCATCAGTGTGAGGAAACTGCTGCAAGACTCCTAGAAGTACTGTTGAACAATATA AAGATCCGAGAAACAAAAGCTACCAAGTCAGCTATCTTACCATTATCTCAGTACCTTTTGGATCCACAAACCCAAGCACAGCAGGCAAGGTTATTGGCAA TTTTGGCTCTTGGGGACCTGTTACAGAATGAGAGTCTTGCTCGAACAGCTGATGCAGTTTCAGCTTGTCGTGCTTTAGTGAATGTGCTTGAAGACCAACC AACAGAAGAAATAAAAGTTGTAGCCATATGTGCTCTGCAAAACCTTGTGATGTACAGTCGAGCAAACAAAAGAGCTGTTGCAGAAGCTGGCGGTGTTCAA GTTATATTGGATCTGATAGGTTCAAGTGAACCAGAAACATCTGTTCAGGCTGCAATGTTTGTTAAACTTCTCTTCTCAAATAATACTATTCAAGAGTATG CTTCCAGTGAGACAGTCCGATCGATAACTGCCGCTATTGAAAAAGATTTATGGGCTAGTGGTACTGTGAATGAAGAGTATCTGAAAGCTTTAAATTCTCT ATTTAGCAACTTCCCACGACTGAGAGCAACTGAACCAGCAACACTTAGCATTCCCCATCTGGTTACATCCTTGAAATCAGGCTCTGAGGGTTGTCAGGAA GCTGCCTTGGATGCACTTTTTCTGCTCAGACAAGCTTGGTCAGCATGCCCAGCTGAAGTTTCAAAAGCTCAGTCAGTAGCAGCTGCAGATGCTATTCCAT TTCTGCAGTACTTAATCCAGTCTGGCCCACCTCGGTTTCAGGAGAAGGCAGAATTTCTGTTACAGTGTTTGCCAGGGACATTGGTGGTGATCATCAAGCG TGGTAACAATATGAAGCAATCCGTCGGAAACCCGAGTGTTTACTGTAAGCTTACACTTGGCAACACTCCACCAAGGCAAACCAAGGTGGTCTCAACCGGC CCTAATCCGGAGTGGGATGAGAGCTTTTCATGGTCCTTTGAGAGTCCTCCAAAAGGACAGAAGCTTAACATTTCATGCAAAAATAAGAGCAAAGTAGGAA AGAGTAAATTTGGGAAAGTAACAATCCAGATTGATAGAGTGGTAATGCTTGGAGCAGTAGCTGGAGAGTACACATTGTTGCCTCAAAGTAAAAGTGGTCC TCCAAGGAATCTAGAAATAGAATTCCAATGGTCTAACAAGTGATACAAGTTGCTGAGTTTGGTAACAAGTTTTCAGATTTGAACATGCTGGGAAAGAAAG TTTTGGATTTAATTTTATCATATATGTATATAGAAGGTGTTTATTAATTTTTCGTCTATAGTTTCAAACAGATTCTTTGTCATAATATTCTTTTGTAACA CGATCCTTCATTTCCTAGGATGAACACTGGGGTACGAAGATCGGGCCTGCTTTGGGTTTCTTGTATGATTTTTTGCTTGTTATTGTTGTCAATTAAAGAG AAGAAGAGTTTTTCATGTTTTTTGTGTGCTACATGAGTATAATTCTATGGACAGTTGAAGGAAAGATTTACAAGTGATTAACTTCATTGTGTATTATTAA CTTTTAAAAGTTAACAATGATTAAATATGAATATATTATTT
• Tissue: pods
• Gene name: LI_gene_188690;
• Additional information: details;

Expression of Ll_transcript_397157

FPKM

• PAB: 0.1
• PNAB: 5.7
• PS1: 7.7
• PS2: 5.5
• PS3: 6.5
• PW1: 6.7
• PW2: 7.7
• PW3: 5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_397157

• Blastp: Protein CELLULOSE SYNTHASE INTERACTIVE 1 from Arabidopsis with 79.63% of identity
• Blastx: Protein CELLULOSE SYNTHASE INTERACTIVE 1 from Arabidopsis with 79.63% of identity
• Eggnog: ARM(ENOG410ZTP2)
• Kegg: Link to kegg annotations (AT2G22125)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019459406.1)
• Pfam: Armadillo/beta-catenin-like repeat (PF00514.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;