| Id Trinity | TRINITY_DN51931_c1_g1_i13 |
|---|---|
| Name Transcript | Ll_transcript_397161 |
| Sequence | AATATCCCTGGTTTGGTATCTAATTTTAACTACCATCTTACTTGATGCTTTAATTCATGGACCATTGGAATTTGAGTTTGATCGTAAAACCTTATATAGA AGCGTTTGAATCTTATATTCCTAACTGTTTGCAGAGAACGCAGCAGCAGCAACATGGAGGATCCAGACGGGACATTAGCAAGTGTTGCCCAATGCATTGA GCAGCTGCGTCAGAGCTCATCTTCTGTGCAAGAGAAAGAGCATTCATTGAAGAAGTTATTGGAGCTTATTGATATGCGTGAAAATGCTTTCAGTGCCGTT GGATCTCACTCTCAGGCAGTTCCAGTACTTGTGTCCCTTCTCCGGTCAGGGTCATTGAATGTGAAGATACAAGCAGCAACTGTATTGGGCTCCCTTTGTA AAGAAAATGAGCTAAGGGTGAAAGTATTACTTGGAGGATGCATTCCTCCATTGCTTGGTCTGCTCAAGTCAAGTTCAGCTGAAGGTCAAGTTGCTGCTGC GAAGACTATATTTGCTGTGACTCAAGGTGGTGCCAGAGACCATGTTGGATCAAAAATCTTTTCAACTGAAGGAGTTGTGCCGGTGCTCTGGCAGCAGCTG CAAAAGGGCCTCAAGAATGGAAATGTAGTTGATAGTTTATTGACTGGAGCGTTGAAAAATCTCTCCAGCAGTACTGAAGGGTTCTGGAATGCCACAGTAC AAGCTGGAGGAGTGGACATACTAGTGAAGTTACTGACAACGGGACAGTCTAGTACTTTAGCTAACGTGTGCTTTTTACTTGCCTGTATGATGATGGAGGA TGCATCTGTGTGTTCAAAGGTGTTGGCAGCAGAGGCAACAAAACAACTCCTCAAACTTTTAGGCCAAGGTAATGATGCCCCTGTTAGAGCTGAAGCAGCT GGTGCTCTTAAATCTCTCTCTGCCCAGAGCAAAGATGCAAGGCGGGAGATATCAAATTCTAATGGCATTCCTGCTTTGATCAGTGCTACCATAGCTCCTT CCAAGGAGTTCATGCAAGGTGAATATGCTCAAGCATTACAGGAGAATGCTATGTGTGCTCTAGCAAACATCTCTGGTGGTTTATCTTCTGTCATCTCCAG CCTTGGTCAAAGCCTTGAATCATGCACCTCACCTACCCAAAGTGCTGACACCTTAGGGGCTTTAGCTTCAGCTCTTATGATATATGATGACAAGGCAGAA TCTACTAAGGCATCAGATCCGTTGGTAGTTGAGCAGACTTTACTAAAGCAATTTAAACCTCATGTACCCTTCCTTGTCCAGGAACGAACCATTGAAGCCC TAGCTAGTTTGTACAGCAACCCCATGCTCTCTATTAAGCTTGAAAGTTCTGATGCAAAGCGTTTGCTTGTTGGTCTAATAACAATGGCGTCCAATGAAGT GCAAGAGGAGCTTCTAAAAGCTCTCTTGACACTGTGCAATGGTGAAGGCAGTCTGTGGCGCACACTTCAAGGCCGTGAAGGAGTTCAGCTGCTGATATCT CTCTTGGGACTTTCATCAGAGCACCAGCAAGAATGTGCTGTTTCCCTCCTTTGCCTTCTATCTAATGAAAATGATGAAAGCAAATGGGCCATTACAGCTG CTGGTGGTATACCTCCACTTGTTCAAATCTTGGAGTCAGGATCAGTTAAAGCAAAGGAAGATTCAGCAACAATCCTTAGGAACCTATGCAATCACAGTGA GGATATACGTGCTTGTGTTGAAAGTGCTGATGCTGTTCCTGCATTGTTGTGGTTATTGAAGAATGGAAGCCCAAATGGGAAGGAGATTGCAGCAAAGACC TTGAATCACTTGATTCATAAATCTGATACCGCAACTATCAGTCAGCTTACAGCATTATTGACCAGTGATCTTCCTGAATCTAAGGTTTATGTTTTAGATG CTTTGAGAAGTATGCTTTCTGTTGTTCCTCTTGGTGATATTCTACGTGAAGGTAGTGCTGCCAGTGATGCAATTGATACAATGATAAAAATATTGAGGTC AACCAAGGAAGAAACCCAGGCAAAGTCTGCATCAGCTCTGGCAGGAATTTTTGAAACAAGGAAAGATGTGCGTGAAAGCAGCATTGCTGTTAAAACGCTT TGGTCAGTCATGAAGTTGCTTAATGTTGAATCTGAAAGTATCTTAATAGAGTCGTCGCGCTGCCTGGCTGCAATATTTCTTTCCATCAAAGAGAACAGGG ATGTAGCTGCTATTGCTAGAGATGCATTATCCCCCCTAGTTGCACTAGCTAACTCTTCAGTTTTGGAAGTGGCAGAGCTGGCAACATGTGCTTTAGCAAA CCTTATTTTAGATAGTGAAACTGCAGAGAAAGCTGTTGCCAAAGAAGTTATCTTGCCTGCTACGAAAGTATTACGTGAAGGCACAATTTCTGGTAAAACA CATGCAGCAGCAGCAATTGCTCGCCTCTTACATTCTAGAGAAGTTGATTTTGCTGTAATTGACTGTGTGAGTCGTGCTGGCACTGTTCTGGCACTAGTTT CTTTCTTAGACTCTGCAATTAATGAATCTGTTGCCACGTCCGAGGCTCTAGAAGCACTTGCCATTTTGTCCAGGTCGGAAGTGACCAATGCACATAATAA ACCTGCATGGGCAGTTTTGGCTGAATTCCCTAAAAGCATAAGCCCAATAGTCCTGTCTATTGCTGATTCAACACCGATGTTGCAGGATAAAGCTATAGAG ATATTATCTAGATTATGCAAGGATCAGCCTGTTATCTTAGGAGACACTGTTGTTACTGCCTCTGGATGTATATCTTCAATAGCCAAGAGGATAGTCAGTT CCACTTCTTCAAATGCAAAGGTCAAAAGCGGGGGCACTGCAATTCTTATTTGTGCTGCAAAAGTAAATCACCAGAGACTGGTGGAAGATCTCAATTTATC AAACTTGTCTGCAGATCTTGTTCACTCTCTTGTTGATATGCTTATTTCTGCAGAGCGTAGTTTGGGTAATCAAGATGATGACAAAAAGGAAGTCATCAGC ATTTACAGGCTTACAAAAGAAGAAGTCAATGGTGGTGAATCCAACACTGGCACTGCCGTTATATCTGGTGCCCACTTAGCTACGTGGTTACTGTCTATTC TTGCTTGTCATGATGAAAGAAGTAGAATTGCAATAATGGAGGCTGGTGCAATTGAGGTTCTAACCGATATGATTTCAAATTGTTACTCACAATATAGTCA GATTGATTATAAAGAAGATAGCAGCATGTGGATTTCTGCTTTATTGTTGGCAATATTATTTCAAGACAGAGATATCATACGAGAAAATGCAACCATGAAA TCTATACCAGCCCTTGCCAATTTATTGAAGTCAGAGGAATCAGCCAACAGATATTTTGCTGCACAAGCAGTTACTAGCCTAGTCTGTAATGGGAGTAGGG GAACTCTTCTGTCTGTGGCAAATTCCGGGGCAGCAGGTGGACTTATCACCTTGCTTGGCTGTGCAGATTCTGATATACAGGATCTTATACAATTGTCGGA GGAATTTGCATTGGTGCGCTATCCTGATCAAGTTGCTCTTGAGAGGTTGTTTAGGGTTGATGACATAAGAGTTGGTGCCGCCTCTCGGAAGGCAATACCT GCCCTAGTTGATTTGCTCAAACCAATTCCAGATCGCCCAGGAGCACCATTTTTAACAATTGGGCTTTTGACTCAGCTTGCTGGAGATTGTCCACCAAATA CGATTCTAATGGTAGAGTCTGGAGCTTTAGAGGCCCTTACTAAGTATCTTTCGCTGGGTCCGCAAGATGCAACTGAAGAAGCTGCTACAGATCTGTTAGG AATTCTGTTTAGCAGCGCTGAGATACGGAGACATGAGTCAGCTTTTGGTGCTGTTCCTCAACTTGTGGCTGTACTACGGTTAGGAGGAAGAGCTTCAAGG TATAGTGCTGCAAAAGCCTTGGAAACTTTATTCTCTGCTGATCATATTAGAAATGCAGAGAGTGCTCGACAAGCTGTTCAACCCTTGGTGGAGATTCTTA ACAGTGGTTTAGAGAGGGAGCAGCATGCTGCAATTGCTGCATTGGTTAGGCTACTGAGTGATAACCCTTCAAGGGCACTTGCTGTTGCAGATGTTGAGAT GAATGCAGTGGATGTCCTTTGCAGGATCCTTTCATCAGACTGCTCATTGGACCTCAAAGGGGATGCTGCTGAATTATGCTGTGTTCTTTTTGGAAATACA AGGATTCGGTCCACAATGGCTGCTGCCCGCTGTGTTGAACCTCTGGTCTCTCTCCTTGTTTCTGAGTATAGTCCTGCTCAACATTCAGTTGTCCGGGCTT TAGACAAGCTTGTTGATGATGAGCAACTGGCTGAATTAGTTGCTGCTCATGGTGCAGTTATTCCTCTAGTTGGCCTACTGTACGGTAGGAACTATGTGCT TCATGAGGCCATTTCCAGAGCTCTGGTCAAATTAGGAAAAGATAGACCTGCTTGTAAAATGGAAATGGTGAGAGCTGGAGTTATTGAATGCATACTTGAC ATCCTACATGAAGCACCTGATTATCTATGTGCAGCTTTTGCAGAATTGTTGCGTATTTTGACCAATAATGCTAACATAGCTAAAGGACCATCTGCTGCTA AAGTGGTTGAACCCCTACTTTTGTTGCTGACTAGACATGAATTTGGGCCTGATGGACAACATAGTGCATTGCAGGTTTTGGTTAATATCTTAGAGCATCC ACAATGTCGTGCTGATTATTCATTGACTTCTAACCAAGCTATCGAGCCACTTATTCCCTTGCTTGATTCTCCAATATCAGCCGTTCAACAGTTGGCTGCT GAGCTTCTCTCACATCTTCTTTTAGAAGAACACCTTCAGAGAGATTCTGTGGCACAGCAAGTAATTGGCCCTCTTATACGAGCTCTTGGTTCTGGTATAC ATATATTGCAGCAGAGAGCTGTAAAGGCTCTGGTTGGTATTGCACTAATATGGCCAAATGAAATTGCAAAAGAGGGTGGTGTTTTTGAAATTTCCAAAGT GATATTGCAAGAAGATCCTTCCCTTCCTCATGCTGTATGGGAGTCTGCTGCCTCTATTTTAGCAAGTATTCTTCAATATAGTTCTGAATTTTACTTGGAA GTGCCTGTCGCTGTTTTGGTAAGGCTGCTTCGGTCTGGCTTAGAGGGCACAGTTGTTGGTGCGTTGAATGCTCTTCTTGTATTGGAAAGTGATGATGGAA CTAGTGCAGAAGCAATGGCTGAAAGTGGTGCTATAGAGGCTCTCTTGGAAATCCTAAGATCTCATCAATGTGAGGAAACTGCTGCAAGACTCTTAGAAGT ATTGCTGAACAACGTAAAGATCAGAGAAACAAAAGTTACTAAATCAGCTATCTTACCATTATCCCAGTACCTCTTGGATCCACAAACCCAAGCACAACAG GCAAGGTTGTTGGCAACTTTGGCTCTTGGTGATCTATTCCAGAATGAGGGACTTGCTCGGACACCTGATGCGGTTTCAGCTTGTCGTGCTTTAGTAAATG TGCTTGAAGACCAACCAACTGAAGAAATGAAAGTCGTAGCCATATGTGCTTTGCAAAACCTTGTGATGTACAGTCGATCAAATAAAAGAGCTGTTGCAGA GGCTGGTGGTGTTCAGGTCATACTAGATCTGATAGGTTCAAGTCATCCGGAAACATCTGTTCAGGCTGCAATGTTTATTAAACTTCTCTTTTCAAATCAC ACTATTCAAGAGTATGCCTCCAGTGAAACAGTCAGGACAATAACTGCTGCTATCGAAAAAGATTTATGGGCTACTGGAACTGTGAATGATGAGTATCTGA AAGCCTTAAATTCTCTATTTAGCAACTTCCCACGACTGAGAGCAACTGAACCAGCAACTCTTAGCATTCCACATCTTGTTACATCCTTAAAGACAGGCTC AGAGGCTTCTCAGGAAGCTGCATTGGATGCACTTTTTCTGCTCAGACAAGCTTGGTCAGCATGCCCAGCAGAAGTTTCAAGAGCCCAATCCATAGCAGCT GCAGATGCTATTCCTTTGCTGCAGTACTTAATCCAGTCCGGACCACCTCGGTTTCAGGAGAAGGCAGAATTCTTATTGCAGTGTTTGCCAGGAACGTTGG TCGTGATCATAAAGCGTGGTAATAATATGAAGCAGTCTGTTGGTAATCCAAGTGTTTATTGTAAACTTACACTTGGCAACACTCCTCCAAAGCAAACCAA GGTGGTCTCAACTGGCCCTAATCCAGATTGGGATGAGAGCTTTTCATGGTCCTTTGAGAGTCCTCCAAAAGGCCAAAAGCTTCACATTTCTTGCAAAAAT AAGAGCAAAATGGGAAAGAGTTCATTTGGAAAAGTTACAATCCAGATTGATAGGGTGGTAATGCTGGGAGCAGTATCTGGTGAGTACACACTGTTACCAG AAAGCAAAAGTGGCCCATCAAGGAATTTAGAAATAGAATTTCAGTGGTCTAACAAGTGATACCCCTTTTACTATAGGGGATAAAAGTTCATTTTTTTTGG GTTTAAATCCTTGTTTTGTGTATGATTGAGTGTATATAGCAGCATTTATTTAGTCCCAAACAAATTATTTTATGACCTGGTTCTTCATTTCCTAGGGTCA CCACTATGGTCATGTTCATCAGGCCTGCTTCTGTTTTCTTATATATGTATCAAAAACATATTGTACTTATGTACTTGGGGATTCTACACCTTTTATGCAT ATTGAGAAGAAATTTGAAAATGAAATAACAATGGTATAGTGTCATGTGTTACCAAAAAAATTAAATGCCTTCTGATTTAAATGTGGACCTAGTTTGTTTT ATTATTGAAAGATAAAAAGATGTATGTACT BLAST |
| Tissue | pods |
| Gene name | LI_gene_188690; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_397161
| Blastp | Protein CELLULOSE SYNTHASE INTERACTIVE 1 from Arabidopsis with 81% of identity |
|---|---|
| Blastx | Protein CELLULOSE SYNTHASE INTERACTIVE 1 from Arabidopsis with 80.87% of identity |
| Eggnog | ARM(ENOG410ZTP2) |
| Kegg | Link to kegg annotations (AT2G22125) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019416641.1) |
| Pfam | Armadillo/beta-catenin-like repeat (PF00514.22) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |