| Id Trinity | TRINITY_DN51931_c1_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_397149 |
| Sequence | TTTCAACACACTTCTTTATTTTTGTATTATCATTATATTCATGAATTCATCTTTCTTTTCTTAATTACTCTCATTCTTTGCTATTCTACAGTGAAGGGAG TCACTTTTTTGATCTGATAACCTAAGCTGGCGACCACACTCACTTGGCCAATGTTTGCTCCTCATGATATGGAAAGAAATGGTGATGGGAAGATTCATGA TTCAGACTCTTCAGTTCCCCATTCTGCTCTGAAGATGGGATTGAGAGAACGCAGCAGCAGCAACATGGAGGATCCAGACGGGACATTAGCAAGTGTTGCC CAATGCATTGAGCAGCTGCGTCAGAGCTCATCTTCTGTGCAAGAGAAAGAGCATTCATTGAAGAAGTTATTGGAGCTTATTGATATGCGTGAAAATGCTT TCAGTGCCGTTGGATCTCACTCTCAGGCAGTTCCAGTACTTGTGTCCCTTCTCCGGTCAGGGTCATTGAATGTGAAGATACAAGCAGCAACTGTATTGGG CTCCCTTTGTAAAGAAAATGAGCTAAGGGTGAAAGTATTACTTGGAGGATGCATTCCTCCATTGCTTGGTCTGCTCAAGTCAAGTTCAGCTGAAGGTCAA GTTGCTGCTGCGAAGACTATATTTGCTGTGACTCAAGGTGGTGCCAGAGACCATGTTGGATCAAAAATCTTTTCAACTGAAGGAGTTGTGCCGGTGCTCT GGCAGCAGCTGCAAAAGGGCCTCAAGAATGGAAATGTAGTTGATAGTTTATTGACTGGAGCGTTGAAAAATCTCTCCAGCAGTACTGAAGGGTTCTGGAA TGCCACAGTACAAGCTGGAGGAGTGGACATACTAGTGAAGTTACTGACAACGGGACAGTCTAGTACTTTAGCTAACGTGTGCTTTTTACTTGCCTGTATG ATGATGGAGGATGCATCTGTGTGTTCAAAGGTGTTGGCAGCAGAGGCAACAAAACAACTCCTCAAACTTTTAGGCCAAGGTAATGATGCCCCTGTTAGAG CTGAAGCAGCTGGTGCTCTTAAATCTCTCTCTGCCCAGAGCAAAGATGCAAGGCGGGAGATATCAAATTCTAATGGCATTCCTGCTTTGATCAGTGCTAC CATAGCTCCTTCCAAGGAGTTCATGCAAGGTGAATATGCTCAAGCATTACAGGAGAATGCTATGTGTGCTCTAGCAAACATCTCTGGTGGTTTATCTTCT GTCATCTCCAGCCTTGGTCAAAGCCTTGAATCATGCACCTCACCTACCCAAAGTGCTGACACCTTAGGGGCTTTAGCTTCAGCTCTTATGATATATGATG ACAAGGCAGAATCTACTAAGGCATCAGATCCGTTGGTAGTTGAGCAGACTTTACTAAAGCAATTTAAACCTCATGTACCCTTCCTTGTCCAGGAACGAAC CATTGAAGCCCTAGCTAGTTTGTACAGCAACCCCATGCTCTCTATTAAGCTTGAAAGTTCTGATGCAAAGCGTTTGCTTGTTGGTCTAATAACAATGGCG TCCAATGAAGTGCAAGAGGAGCTTCTAAAAGCTCTCTTGACACTGTGCAATGGTGAAGGCAGTCTGTGGCGCACACTTCAAGGCCGTGAAGGAGTTCAGC TGCTGATATCTCTCTTGGGACTTTCATCAGAGCACCAGCAAGAATGTGCTGTTTCCCTCCTTTGCCTTCTATCTAATGAAAATGATGAAAGCAAATGGGC CATTACAGCTGCTGGTGGTATACCTCCACTTGTTCAAATCTTGGAGTCAGGATCAGTTAAAGCAAAGGAAGATTCAGCAACAATCCTTAGGAACCTATGC AATCACAGTGAGGATATACGTGCTTGTGTTGAAAGTGCTGATGCTGTTCCTGCATTGTTGTGGTTATTGAAGAATGGAAGCCCAAATGGGAAGGAGATTG CAGCAAAGACCTTGAATCACTTGATTCATAAATCTGATACCGCAACTATCAGTCAGCTTACAGCATTATTGACCAGTGATCTTCCTGAATCTAAGGTTTA TGTTTTAGATGCTTTGAGAAGTATGCTTTCTGTTGTTCCTCTTGGTGATATTCTACGTGAAGGTAGTGCTGCCAGTGATGCAATTGATACAATGATAAAA ATATTGAGGTCAACCAAGGAAGAAACCCAGGCAAAGTCTGCATCAGCTCTGGCAGGAATTTTTGAAACAAGGAAAGATGTGCGTGAAAGCAGCATTGCTG TTAAAACGCTTTGGTCAGTCATGAAGTTGCTTAATGTTGAATCTGAAAGTATCTTAATAGAGTCGTCGCGCTGCCTGGCTGCAATATTTCTTTCCATCAA AGAGAACAGGGATGTAGCTGCTATTGCTAGAGATGCATTATCCCCCCTAGTTGCACTAGCTAACTCTTCAGTTTTGGAAGTGGCAGAGCTGGCAACATGT GCTTTAGCAAACCTTATTTTAGATAGTGAAACTGCAGAGAAAGCTGTTGCCAAAGAAGTTATCTTGCCTGCTACGAAAGTATTACGTGAAGGCACAATTT CTGGTAAAACACATGCAGCAGCAGCAATTGCTCGCCTCTTACATTCTAGAGAAGTTGATTTTGCTGTAATTGACTGTGTGAGTCGTGCTGGCACTGTTCT GGCACTAGTTTCTTTCTTAGACTCTGCAATTAATGAATCTGTTGCCACGTCCGAGGCTCTAGAAGCACTTGCCATTTTGTCCAGGTCGGAAGTGACCAAT GCACATAATAAACCTGCATGGGCAGTTTTGGCTGAATTCCCTAAAAGCATAAGCCCAATAGTCCTGTCTATTGCTGATTCAACACCGATGTTGCAGGATA AAGCTATAGAGATATTATCTAGATTATGCAAGGATCAGCCTGTTATCTTAGGAGACACTGTTGTTACTGCCTCTGGATGTATATCTTCAATAGCCAAGAG GATAGTCAGTTCCACTTCTTCAAATGCAAAGGTCAAAAGCGGGGGCACTGCAATTCTTATTTGTGCTGCAAAAGTAAATCACCAGAGACTGGTGGAAGAT CTCAATTTATCAAACTTGTCTGCAGATCTTGTTCACTCTCTTGTTGATATGCTTATTTCTGCAGAGCGTAGTTTGGGTAATCAAGATGATGACAAAAAGG AAGTCATCAGCATTTACAGGCTTACAAAAGAAGAAGTCAATGGTGGTGAATCCAACACTGGCACTGCCGTTATATCTGGTGCCCACTTAGCTACGTGGTT ACTGTCTATTCTTGCTTGTCATGATGAAAGAAGTAGAATTGCAATAATGGAGGCTGGTGCAATTGAGGTTCTAACCGATATGATTTCAAATTGTTACTCA CAATATAGTCAGATTGATTATAAAGAAGATAGCAGCATGTGGATTTCTGCTTTATTGTTGGCAATATTATTTCAAGACAGAGATATCATACGAGAAAATG CAACCATGAAATCTATACCAGCCCTTGCCAATTTATTGAAGTCAGAGGAATCAGCCAACAGATATTTTGCTGCACAAGCAGTTACTAGCCTAGTCTGTAA TGGGAGTAGGGGAACTCTTCTGTCTGTGGCAAATTCCGGGGCAGCAGGTGGACTTATCACCTTGCTTGGCTGTGCAGATTCTGATATACAGGATCTTATA CAATTGTCGGAGGAATTTGCATTGGTGCGCTATCCTGATCAAGTTGCTCTTGAGAGGTTGTTTAGGGTTGATGACATAAGAGTTGGTGCCGCCTCTCGGA AGGCAATACCTGCCCTAGTTGATTTGCTCAAACCAATTCCAGATCGCCCAGGAGCACCATTTTTAACAATTGGGCTTTTGACTCAGCTTGCTGGAGATTG TCCACCAAATACGATTCTAATGGTAGAGTCTGGAGCTTTAGAGGCCCTTACTAAGTATCTTTCGCTGGGTCCGCAAGATGCAACTGAAGAAGCTGCTACA GATCTGTTAGGAATTCTGTTTAGCAGCGCTGAGATACGGAGACATGAGTCAGCTTTTGGTGCTGTTCCTCAACTTGTGGCTGTACTACGGTTAGGAGGAA GAGCTTCAAGGTATAGTGCTGCAAAAGCCTTGGAAACTTTATTCTCTGCTGATCATATTAGAAATGCAGAGAGTGCTCGACAAGCTGTTCAACCCTTGGT GGAGATTCTTAACAGTGGTTTAGAGAGGGAGCAGCATGCTGCAATTGCTGCATTGGTTAGGCTACTGAGTGATAACCCTTCAAGGGCACTTGCTGTTGCA GATGTTGAGATGAATGCAGTGGATGTCCTTTGCAGGATCCTTTCATCAGACTGCTCATTGGACCTCAAAGGGGATGCTGCTGAATTATGCTGTGTTCTTT TTGGAAATACAAGGATTCGGTCCACAATGGCTGCTGCCCGCTGTGTTGAACCTCTGGTCTCTCTCCTTGTTTCTGAGTATAGTCCTGCTCAACATTCAGT TGTCCGGGCTTTAGACAAGCTTGTTGATGATGAGCAACTGGCTGAATTAGTTGCTGCTCATGGTGCAGTTATTCCTCTAGTTGGCCTACTGTACGGTAGG AACTATGTGCTTCATGAGGCCATTTCCAGAGCTCTGGTCAAATTAGGAAAAGATAGACCTGCTTGTAAAATGGAAATGGTGAGAGCTGGAGTTATTGAAT GCATACTTGACATCCTACATGAAGCACCTGATTATCTATGTGCAGCTTTTGCAGAATTGTTGCGTATTTTGACCAATAATGCTAACATAGCTAAAGGACC ATCTGCTGCTAAAGTGGTTGAACCCCTACTTTTGTTGCTGACTAGACATGAATTTGGGCCTGATGGACAACATAGTGCATTGCAGGTTTTGGTTAATATC TTAGAGCATCCACAATGTCGTGCTGATTATTCATTGACTTCTAACCAAGCTATCGAGCCACTTATTCCCTTGCTTGATTCTCCAATATCAGCCGTTCAAC AGTTGGCTGCTGAGCTTCTCTCACATCTTCTTTTAGAAGAACACCTTCAGAGAGATTCTGTGGCACAGCAAGTAATTGGCCCTCTTATACGAGCTCTTGG TTCTGGTATACATATATTGCAGCAGAGAGCTGTAAAGGCTCTGGTTGGTATTGCACTAATATGGCCAAATGAAATTGCAAAAGAGGGTGGTGTTTTTGAA ATTTCCAAAGTGATATTGCAAGAAGATCCTTCCCTTCCTCATGCTGTATGGGAGTCTGCTGCCTCTATTTTAGCAAGTATTCTTCAATATAGTTCTGAAT TTTACTTGGAAGTGCCTGTCGCTGTTTTGGTAAGGCTGCTTCGGTCTGGCTTAGAGGGCACAGTTGTTGGTGCGTTGAATGCTCTTCTTGTATTGGAAAG TGATGATGGAACTAGTGCAGAAGCAATGGCTGAAAGTGGTGCTATAGAGGCTCTCTTGGAAATCCTAAGATCTCATCAATGTGAGGAAACTGCTGCAAGA CTCTTAGAAGTATTGCTGAACAACGTAAAGATCAGAGAAACAAAAGTTACTAAATCAGCTATCTTACCATTATCCCAGTACCTCTTGGATCCACAAACCC AAGCACAACAGGCAAGGTTGTTGGCAACTTTGGCTCTTGGTGATCTATTCCAGAATGAGGGACTTGCTCGGACACCTGATGCGGTTTCAGCTTGTCGTGC TTTAGTAAATGTGCTTGAAGACCAACCAACTGAAGAAATGAAAGTCGTAGCCATATGTGCTTTGCAAAACCTTGTGATGTACAGTCGATCAAATAAAAGA GCTGTTGCAGAGGCTGGTGGTGTTCAGGTCATACTAGATCTGATAGGTTCAAGTCATCCGGAAACATCTGTTCAGGCTGCAATGTTTATTAAACTTCTCT TTTCAAATCACACTATTCAAGAGTATGCCTCCAGTGAAACAGTCAGGACAATAACTGCTGCTATCGAAAAAGATTTATGGGCTACTGGAACTGTGAATGA TGAGTATCTGAAAGCCTTAAATTCTCTATTTAGCAACTTCCCACGACTGAGAGCAACTGAACCAGCAACTCTTAGCATTCCACATCTTGTTACATCCTTA AAGACAGGCTCAGAGGCTTCTCAGGAAGCTGCATTGGATGCACTTTTTCTGCTCAGACAAGCTTGGTCAGCATGCCCAGCAGAAGTTTCAAGAGCCCAAT CCATAGCAGCTGCAGATGCTATTCCTTTGCTGCAGTACTTAATCCAGTCCGGACCACCTCGGTTTCAGGAGAAGGCAGAATTCTTATTGCAGTGTTTGCC AGGAACGTTGGTCGTGATCATAAAGCGTGGTAATAATATGAAGCAGTCTGTTGGTAATCCAAGTGTTTATTGTAAACTTACACTTGGCAACACTCCTCCA AAGCAAACCAAGGTGGTCTCAACTGGCCCTAATCCAGATTGGGATGAGAGCTTTTCATGGTCCTTTGAGAGTCCTCCAAAAGGCCAAAAGCTTCACATTT CTTGCAAAAATAAGAGCAAAATGGGAAAGAGTTCATTTGGAAAAGTTACAATCCAGATTGATAGGGTGGTAATGCTGGGAGCAGTATCTGGTGAGTACAC ACTGTTACCAGAAAGCAAAAGTGGCCCATCAAGGAATTTAGAAATAGAATTTCAGTGGTCTAACAAGTGATACCCCTTTTACTATAGGGGATAAAAGTTC ATTTTTTTTGGGTTTAAATCCTTGTTTTGTGTATGATTGAGTGTATATAGCAGCATTTATTTAGTCCCAAACAAATTATTTTATGACCTGGTTCTTCATT TCCTAGGGTCACCACTATGGTCATGTTCATCAGGCCTGCTTCTGTTTTCTTATATATGTATCAAAAACATATTGTACTTATGTACTTGGGGATTCTACAC CTTTTATGCATATTGAGAAGAAATTTGAAAATGAAATAACAATGGTATAGTGTCATGTGTTACCAAAAAAATTAAATGCCTTCTGATTTAAATGTGGACC TAGTTTGTTTTATTATTGAAAGATAAAAAGATGTATGTACT BLAST |
| Tissue | pods |
| Gene name | LI_gene_188690; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_397149
| Blastp | Protein CELLULOSE SYNTHASE INTERACTIVE 1 from Arabidopsis with 80.58% of identity |
|---|---|
| Blastx | Protein CELLULOSE SYNTHASE INTERACTIVE 1 from Arabidopsis with 80.58% of identity |
| Eggnog | ARM(ENOG410ZTP2) |
| Kegg | Link to kegg annotations (AT2G22125) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019416641.1) |
| Pfam | Armadillo/beta-catenin-like repeat (PF00514.22) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |