| Id Trinity | TRINITY_DN51935_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_397729 |
| Sequence | TAGAAATTGAATGATTAACTTTTTAATCATTTTGAGAACCTAGTAACGTCATGTTGGTATTCTCTTCTATTTATTAAGAGCTAAAAAAAATCACATTCAC ATTTCATTCACCATTTACTACACCAACAAAAATGGCATCAGAATTGAATTCCAGAGGTCATGAAGTTCAACCTATCCTCAACACTGATTTCCAAAAATCA CAAAAATCACCACTCTCCATAATAACCAGACCTGTTCACTACATTCTCTTCGAACAAAATCTTATTTTTATTCTCTTTGGTATTCTCGTCTCTTCTTTAT TCTTCACCTTCTTTCCTTCATCTAAAAATTCCTCTCAATACGACCCTATTTCGATATCTTACTTCAACCATGACTCTGTCTCTACATTCCAGTACTCGAC TCAACAATATGGATTACCGGTTCATTCGGTTGGGAGAGTACCCTTAGGTATTAAGAGTAAAGGGCTCAGGATTCTAGTAACCGGTGGCGCGGGTTTTGTT GGGTCCCACCTAGTTGATCGATTAATTGCTCGAGGTGACAATGTTATTGTGTTGGATAATTTTTTCACCGGGAGAAAAGAAAATGTAATACACCATTTTG GTAATCCACGGTTTGAGCTTATAAGACACGATGTCGTTGAACCACTACTAATTGAGGTTGACCAGATCTACCATCTTGCTTGTCCAGCTTCTCCAGTTCA TTACAAGTATAACCCGGTGAAGACAATTATATCCTTTTATTTATTTTTTGTTTATTCCATAAATTTTAATAGTATTATTTTAAATTGAGATCACAATTAC AATTACGGCCCAATTTTGTAATTAGATTCCATTTATAACTATGTCATGATGCATGAACATGACTTCATGGCTGGTTCATCGGTCAAATTGACTTGATTAT CCAATACGTCAAGAAAAAAGTTATTCACATATCTAGTATAGGTATCACGAGTGCAATTACAATCGTAAACCATATTTTAAAATCATGTGTATTATGTTTT GCATCTTGGTTATGAGTTTTTCAATTATGGTCGTTGTTACAATTCGATTACATTTATAGTAATCTTGTTAAGGAAAATATTGCTAATGTAGTAGGTTGTA TTTATCGTAATTATGTTATGAAAAATATCGATCGATGTTATTACAATCTGTATCACTACAACCGTAATTATGATTATTGACCATATTTTAAAGCCATGTA TATTATTATGTTTTGCAAGTTGGATGTTATCATGTTATGGTTCTTTGTTTATGTTGTTTGAAGTGGAATTCTTAACGGTGTGATTACAAGACCAATGTGG TGGGAACGTTGAATATGTTGGGATTGGCTAAGAGAGTGAGAGCAAGGTTTCTATTAACAAGTACAAGTGAGGTTTATGGAGATCCTTTGCAACATCCTCA AAAGGAGACATACTGGGGCAACGTTAACCCTATTGGTGTTAGAAGCTGCTACGACGAGGGAAAACGTACGGCAGAGACATTGACGATGGATTATCACAGA GGAGCAGGACTTCAGGTTAGAATTGCCAGGATCTTTAACACCTATGGGCCTCGAATGTGCTTAGATGATGGTCGTGTTGTTAGTAATTTTGTTGCTCAGG CACTAAGAAAAGAACCTTTGACTGTTTATGGGGATGGGAAACAGACAAGGAGTTTTCAGTATGTTTCTGATTTGGTGGAGGGTCTAATACGCCTTATGGA AGGAGACCATGTAGGACCTTTCAATATTGGGAATCCCGGAGAATTCACCATGCTTGAACTTGCTAAGGTTGTACAAGAAACAATTGATCCAAATGCAAAG ATAGTATACAAAACCAACACAGAGGATGACCCACATAAGAGAAAACCAGACATTAGTAAGGCTAAGGAACTACTTGGTTGGGAACCTAAAGTGGACCTAC GTAGTGGACTTCCTCTAATGGTTTCTGATTTCAGACAACGCATTTTTGGTGACAACAAAGAAAGTGGTGCAACTTCTGCATGATTCTTACTTAGAGTGTG AATGGGATTAAGATTGTTCTTTGCACTATTTCTTATATTGTTTCACTATTAAGACCATATTTCTTTTTGTTTAATTATTATTTTTTAAATTTCTAACTAC ATGTTGAAACAACATGACTTTTGAGTGATTTTTTTTATTTCTAGACTCAAAAGTAGTGTTAACATGACTTTTAAGTGACCC BLAST |
| Tissue | pods |
| Gene name | LI_gene_188708; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_397729
| Blastp | UDP-glucuronic acid decarboxylase 4 from Arabidopsis with 90.28% of identity |
|---|---|
| Blastx | UDP-glucuronic acid decarboxylase 4 from Arabidopsis with 90.67% of identity |
| Eggnog | Nad-dependent epimerase dehydratase(COG0451) |
| Kegg | Link to kegg annotations (AT2G47650) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_020227477.1) |
| Pfam | NAD dependent epimerase/dehydratase family (PF01370.20) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |