Ll_transcript_397736

• Id Trinity: TRINITY_DN51935_c0_g2_i3
• Name Transcript: Ll_transcript_397736
• Sequence: TGACGGTATATGGGGATGGGAAGCAGACAAGGAGTTTCCAGTATGTTTCTGATTTGGTAAGCCATTTTTCTTTATATTAAAGTAGGTATCCCTTCCCTAG ATCAATTTTATTTTTTTTGTGATATATAACAGTAGTGTCTAATATCTATACAAGCTCATTATATCCTTCTTTATTCATTTGATTTTTTTTTTGTAAAAAA TTAATATTTGATTAAATATGAATGATGAATGATGCAATAACAACATATGAAACTCATACTCGATGCATATATTCTTTCTCATAATAATAATAATCACATA GCTTGGGCAAGAAATTTAATTCTGTGTTCTTTTGAAAAAATCTGTAATATTTTTTAACATGATTTTCAAATATCTGTGTTATAATTTCTATTTGAGTGTA GAAGAAGTTTAGGAGAAAAAAATTGTAGTAGTAAAGTAGAAGGAAAATCAATTAAACCTGGGATTTTAGAAAAACCGATTGAAACAAAAGTAGTAAGACA TATTCCCACTTCTTATTGCTGTTTACTGTATTAATGTGATATTTTTTCGTGCTGTTACAGGTGGAGGGCCTCATGCGCCTTATGGAAGGAGAACATGTGG GACCTTTTAACCTTGGAAATCCAGGCGAATTTACCATGCTTGAACTTGCCAAGGTAAATTTGTGTTTTTTGCATACTTAATTTTGAATTAGTAGAGGGGG AAAGTTTAATAAGAAACTAGTCTAAGAGAAAAAGTTTAATATCTATGCATTGTAGGTATAGGAATTTTGGATACATTTTTCCCATCCAGGTATTAGAACT TAATAATCACGTTTGTGCACAGAATAGGACGGAAAAAAAAAAGATGCTCATAGCATTGTGCATCACATTAGTGATTCTGACAATAATGTATATATTTTGA CAAGTAGTGCAAACAAACAAAAGTAATGTTTCAGTAATTCAGTCTCACACGGTAGACATTATTAATTGAATGTATGAATATTATGTCCCTTAAATAAGCT ATGTGGTTGGTGCTGATGTAGGTGGTCCAAGAAACAATAGACCCAGATGCAAAGATAGAGTATAGGGACAACACCGAGGATGACCCACACAAGAGAAAGC CTGATATTAGTAAGGCCAAGGAGCAACTTGGCTGGGAACCCAAGGTGGACCTTCGCAAGGGCCTCCCTCTAATGGTTTCTGACTTCAGGCAACGCATTTT TGGTGACCACAAAGAAGATGCTACTACAACCTCTGCCTAATTCTTACATGGACTATGTTATGCATACCTTAATAGTAGAGATTACAGTGAAGGGTGTTTC CCATCCCTTATAGGTGTATTAGTTATGAGCTCTGCATAATAGTCACTTCTGTTGTTTGCTCTTCATCAATCTTTTATATGTGGGATATCACCCTCTTTCA ATATTGGAGCTAGCCATTCTCAATTCCTGCAATCTATATTCTTTTTTCTATATAATTTTGGATTGTAATTGGGGTGTGCAAGATTCTACAATTATAGCTA TTTCTACATTTTACCTTTATTTTATCAAACTTCGATTTTGGTCTTTGAATGATGGTGATTATGTTTTGTATTCCCCATCATTCCACGTAGTAATATAATC TATGAGAACAAAGGAACCAATTTGAACAATCTATTGGTTGTGCACCATGGAGAAAATGAAGTTGACTGGTATAAAACAAGTTTCTGAATAATTTGTAGGT ACATGCCCAAAGTTGACAGTATCTCTCAGTAGAGTGGGTTTATGACTTCACATCGATGAGAGGCGTAGAAAGCGGCGTTGTGGAACCTCGCGATCACGAA GAAAGCCTGCTTGTTCTGCATCCCATTTGTTAACCTCAGATGTTGTCATTTTATCAGTACCATGGTTATGTGTTTGATTTGGTTGAAATGACTCAAAATT TGCCTTGTTAGCATGCTTGTCTAGCCAATCTATGATGTCTGTAAAAACAATTTCGATGTTTTCATCAGTCTCACCAGCTGTTAATCCATGCCACATTCCT GGGTACAACTTCATGGTCTTGTCTATGCTACTGGCTTTCTCATATAATGCCTTG
• Tissue: pods
• Gene name: LI_gene_188709;
• Additional information: -

Expression of Ll_transcript_397736

FPKM

• PAB: 2.5
• PNAB: 0
• PS1: 1.2
• PS2: 1.1
• PS3: 0.8
• PW1: 0.2
• PW2: 5
• PW3: 2.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_397736

• Blastp: Caffeoylshikimate esterase from Arabidopsis with 58% of identity
• Blastx: UDP-glucuronic acid decarboxylase 4 from Arabidopsis with 83.33% of identity
• Eggnog: alpha beta hydrolase fold(COG2267)
• Kegg: Link to kegg annotations (AT1G52760)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019441744.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;