Ll_transcript_397752

• Id Trinity: TRINITY_DN51935_c0_g2_i4
• Name Transcript: Ll_transcript_397752
• Sequence: TGACGGTATATGGGGATGGGAAGCAGACAAGGAGTTTCCAGTATGTTTCTGATTTGGTAAGCCATTTTTCTTTATATTAAAGTAGGTATCCCTTCCCTAG ATCAATTTTATTTTTTTTGTGATATATAACAGTAGTGTCTAATATCTATACAAGCTCATTATATCCTTCTTTATTCATTTGATTTTTTTTTTGTAAAAAA TTAATATTTGATTAAATATGAATGATGAATGATGCAATAACAACATATGAAACTCATACTCGATGCATATATTCTTTCTCATAATAATAATAATCACATA GCTTGGGCAAGAAATTTAATTCTGTGTTCTTTTGAAAAAATCTGTAATATTTTTTAACATGATTTTCAAATATCTGTGTTATAATTTCTATTTGAGTGTA GAAGAAGTTTAGGAGAAAAAAATTGTAGTAGTAAAGTAGAAGGAAAATCAATTAAACCTGGGATTTTAGAAAAACCGATTGAAACAAAAGTAGTAAGACA TATTCCCACTTCTTATTGCTGTTTACTGTATTAATGTGATATTTTTTCGTGCTGTTACAGGTGGAGGGCCTCATGCGCCTTATGGAAGGAGAACATGTGG GACCTTTTAACCTTGGAAATCCAGGCGAATTTACCATGCTTGAACTTGCCAAGGTGGTCCAAGAAACAATAGACCCAGATGCAAAGATAGAGTATAGGGA CAACACCGAGGATGACCCACACAAGAGAAAGCCTGATATTAGTAAGGCCAAGGAGCAACTTGGCTGGGAACCCAAGGTGGACCTTCGCAAGGGCCTCCCT CTAATGGTTTCTGACTTCAGGCAACGCATTTTTGGTGACCACAAAGAAGGTGCTGCTGCAACCTTTGCCTAATTATTGCTTGGAGTATGTTATAAAGTGA GAAAGTGAAAAGACAGTAGTTCAGAGATTACATTAAGGGTGTTTCCAATCCCTTAGAGGTGCATTAGTTACACCAGCATATGAGCTTCACAGTCCCTTTT GTCCTTTGTTCTCCATCAAGATTGATAGCTATTCATTCTCAATTCCTGCAATCTATATTCTTTTTGTATGTTATTTTGAGATGTAATTGCTATGTGCAAG ATGCTAAAGTTATTAGCTATTTCTACATTTTACCTTCACTTACTTTATTTTATCGAACTTCAACTTGATCTTTGATCTTATACAGTTTGCTACCCTCATG TTTCATGTTTGTGAATAATAATAATAATGATGATTATTTTTCTAGTGTTACTCATCTTTCCATGTAATGATATACTTCATGAGAACAAAAGAG
• Tissue: pods
• Gene name: LI_gene_188709;
• Additional information: details;

Expression of Ll_transcript_397752

FPKM

• PAB: 18.8
• PNAB: 21.4
• PS1: 13.5
• PS2: 11.3
• PS3: 14.8
• PW1: 39.6
• PW2: 126.9
• PW3: 88.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_397752

• Blastp: UDP-glucuronic acid decarboxylase 2 from Arabidopsis with 88.17% of identity
• Blastx: UDP-glucuronic acid decarboxylase 2 from Arabidopsis with 86.27% of identity
• Eggnog: Nad-dependent epimerase dehydratase(COG0451)
• Kegg: Link to kegg annotations (AT3G62830)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019427927.1)
• Pfam: GDP-mannose 4,6 dehydratase (PF16363.4)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;