Ll_transcript_397373

• Id Trinity: TRINITY_DN51938_c0_g1_i2
• Name Transcript: Ll_transcript_397373
• Sequence: ATGAGGTGAGAGGGCCACGTTTGAAGGATACGGTGGACGTGTCCGCACTGAAGCCATGCAACCTCACCTTGGTGGAAGAGGATTACGATGAACACGACGC CGTATGCCACGTCAGATGCCTCCTCGACATTATCGCCTGCACCACCAGCTTTGGCCTTTCGCCGGCGCCGGAGAAGAACGCTACCATCTCCGGAAAACTA TCTCCGGCGGATGTGGTTGACGGAGACTGTGAGATAAGTCAGCCATGTCCTAAGCTTGGAAAGTTCTACGAGTTTTTCTCTCTTTCTCATCTCACTCCAC CACTCCAATATATAAAGAAAACAGTGAGACGACAAGTTTCGGAGATATCGGAGTCTGATCATTTCTTCTCTCTTGATGTGAAACTATGTAATGGGAAAGT GGTGCATGTTGAAGCTTGGAGGAAGGGATTCTACAGTGTTGGGAAACAGAGGATTCTCAGTCATACTCTTGTAGATTTGTTGAGACAGTTTAGTCGACCG TTTGATGTTGCTTATGATAATCTTTTGAAAGCATTTTCGGAACGGAACAAGTTTGGGAATCTCCCTTATGGATTCAGAGCCAATACATGGCTTGTTCCTC CGGTTGTGGCACAATCACCGTCATTTTTTCCTCCTCTTCCCATGGAGGATGAAAACTGGGGAGGAAATGGTGGTGGTCTAGGAAGAGATGGGAAGTATGA TTTGATTTCCTGGGCCCATGAGTTTTCATTTATTGCATCTATGCCTTGCAAGACAGCAGAAGAAAGACAAGTCCGTGATAGAAAAGCATTCCTTCTTCAC AGTCTATTCGTTGATGTCGCCATTTTCAGAGCTATTAAGGCTGTTAAACATGTGATGGAAGAACCAGATTTAAACTGCTCTATCTCAGAAAGTAATATTC TTTACACCGAGACAGTTGGTCATTTGAGTATTGAAGTCACAAAAGATGCTACTGTTGCAAGTTGTAAAGTCGATACTAAAGTGGACGGAGTTAAAGCCAC AGGAGTAAATCAGAAGGATCTATTAGCTCGAAATCTATTGAAAGGAATTACTGCTGACGAGAACACTGCAGCCCATGATATTACCACTTTAGGTGTTATT AATGTGAGATATTGTGGTTATGTGGCTTATGTGAAAGTTGAGGGTGGAGAAAACGACAATTTTGACTCTTCATCTTATCAAAATACTGAATTTCTTGATC AGCTAGAGGGTGGCGCCAATGCACTCAACATTAACAGTTTGAGATTACTTCTCAACACAACACAGTCGGAAAACAGTAGACCAGTTACTGAGATACAAAC ACTTGAGAATGAAGAGCTTGGAGCCTCTCATGCTTTTGTGGAGAGTCTGATCAAAGAAAGCCTTTCTAAGCTTGAGGTTGAGGAAAGGGATTTGGACAAT TTTGTAAGATGGGAACTCGGAGCCTGCTGGTTACAACATTTGCAAGATCAAAATAACACCGAAAAAGATAAGAAACCATCTTTGGATAAGGCGAAGAGTG AAGTGAAGGTTGAGGGGCTAGGGAAACCCCTTAAACCCCTCAAGAATAGTAAAAATAAATCAGATCTAAGTAATCCTAAATCGGCATCTGAAAACTCCAA ATCTCATCATGTGTGTGTTATTGGGGAGGCTGAAAGTGCTTCATTACCTTCTGCAGAATCCCAACATGAAACTACGACAGCAGAAAATGAGCTTGTGCTC AAGAGGATTTTATCTGGGGCAGCTTTTAACCAACTAAAAGAATCTGGAACTGGACTTCACCGCAAGTCAATTCAAGATCTGATTGACTTGTCTAAGAAAT ACTACGTCGATGTTGCTCTACCAAAACTGGTAGCAGATTTTGGCTCATTGGAACTCTCTCCTGTTGATGGCCGCACCCTAACCGATTTCATGCATACTCG GGGTCTACGTATACATTCTCTTGGACATGTTGTCAAGCTATCTAAAAAGCTATCACATGTTCAATCACTTTGTATTCATGAGATGATAGTTCGAGCTTTC AAGCACATCCTGCAGGCTGTGATTGCAGTTGTTGACAAGGAGAAAGTGGTTACAGCAATAGCTGGTGCATTGAATTTGTTTCTTGGTGTTCCTGAAAATA GAGAATCAGATAAATCATGCAAAACCCATCCCGTTGTTTGGAAATGGCTAGAGGTTTTTCTGAAGAAGCGATTTGATTGGGATGTTAGCAACTTGAATTA CAATGATGTGAGGAAGTTTGCAATTTTACGTGGATTATGTCACAAGGTTGGCATTGAGCTTGTTCCAAGGGATTTTGACATGGATTCTCCGACCCCTTTC CGCAAATCTGATATTGTCAGCTTGATCCCAGTTCACAAGCAAGCAGCATGCTCATCTGCAGATGGAAGGCAGCTTCTAGAGTCATCAAAAACAGCTTTAG ACAAGGGAAAGCTTGAAGATGCAGTTACCTATGGAGCGAAGGCTCTTGCCAAGCTTGTTGCGGTTTGTGGTCCCTATCATCGAATGACAGCAGGGGCATA CAGCTTACTTGCTGTAGTTTTATACCATACTGGAGATTTTAATCAGGCAACAATTTATCAACAAAAAGCTCTGGACATCAATGAGAGAGAGTTAGGTCTG GATCATCCAGATACGATGAAGAGTTATGGGGATCTTGCAGTTTTCTATTATAGACTTCAACACACAGAGCTGGCTCTGAAGTATGTAAAGCGTGCTCTAT ATCTTCTGCATCTAACATGTGGCCCATCTCATCCAAACACGGCCGCAACATACATTAATGTGGCTATGATGGAGGAAGGTCTGGGAAATGTGCATGTTGC TCTCAGATATCTTCACAAAGCTTTAAAATGCAACAAAAGATTACTTGGCCCAGATCATATTCAGACGGCTGCAAGTTATCACGCAATAGCAATAGCACTT TCGTTGATGGAAGCATATCCTTTGAGTGTGCAGCATGAGCAAACAACTTTGAAAATTCTGCGGGCAAAACTTGGCCCAGATGACTTGCGTACACAGGATG CTGCTGCATGGCTTGAGTATTTCGAGTCCAAGGCTTTTGAACAACAAGAGGCTGCACGTAGCGGTGCTCGAAAGCCTGATGCATCAATAGCTAGCAAAGG CCACCTAAGTGTGTCAGATCTGCTTGATTACATTAATCCTAATGATGATGCCAAAGGAAGAGATGTGGCAGTAAAGAGAAGAAGCCAGATAGCAAAGGTG AGGACAAAATCTAACCAGAACAATGGCTCAGCAAGTTCTGACGAGTCTTCAAAAGAAACTTCAAAAGAGACTTCAGATGAGGATGTACATATACCTGTAC CAGGAGTTTCTGCAAATGCTGAGCAGGAGACAAAGTCTGTGCCCGATTCAGAACAGCCTATTTTAGAAAAGACCTCAGATGAAAAACAACATATTTGGGG TAACTCGTCTGAGGCAAATGCTGATGGAGAGGATGGATGGCAACCAGTTCAACGACCAAAGTCTTCCGGTTCATATGGCCAGCAACGGAAGCAAAGACGA GCAACAATTAACAAAGTTTCTTACCAGAAGAAGAATGTGGAATCTGGCACAGACCATCCTTCTGTAAGGAGTACTAATCAGAGTGGGAGATATTACTTTT CGAAGAAGCGAACAATATCCCATGGGAGTTCTACTGATAATCATTCAGAAAACGTAGCCCAGGGCTCTAAATTTGGGAGGAAAGTGGTCAAAGCTGTTAC GTACAGGGTCAAGTCCGTTTCTGCAGTTACAGATACTACTGCAAAGGATACATCAAAAATCATAGATCACCTATTTAGTTCTAACACGGCAGAACTCAGT TCAAATTCTTCATCAAATGATGTCAATCCTGTCAAGACTTCTATGGTTAGTCTTGGAAAATCTCCTTCATATAAGGAAGTGGCATTGGCTCCTCCTGGGA CAATCTCCAAGTTGCAGGTCTATAATCCCCAAAGTGAGATTCCTGGTAGTAATGACCGCGGTGTTGGAAAACATGAAGAGGAAGATACTGAAGCACATGC TAACTCTAACCCAACCGTAGAAGAAGTAAACAATATATTTGAACAGAAGGACGCAGATTTTTCTGAGAAGAGAGACGGAACACAGTTTGCTGATGTTGCA CAATATAATCTTGAGAGTGCTAAGAGACTTGAATCTGGGGATGTTGAGGCTCATGAAGCAGCTGATAATATCATAATGATTGATGCAGTGGAGGATCCTG TGGATTCTCACAAACTAGAACTTGATACAAGTGCATCTCGCAGTTTTGAAATACCTAATAGTGATACAAATATCATCTCACAAGAAGGTGATGATTTACG GGTCAATATCTCTCCATCAAGTAAGAAGTTGTCTGCGTCTGCAGCTCCATTCAACCCATCGCCAGGTATTGCACGCCCTGCACCAGTTTCCATGAACATA ACTCTTCCTTCTGGTCCAACCATTTGCCCCTGGCCAGTAAATATGAATGTTCACCGTGGACCTGCTACTTTGTTACCTGCAGTTACCGCAATGTGTTCCT CTCCTCACCATGCATACCCTTCACCTCCGGCAACACCAAACATGATTCAACCATTGCCATTTATGTATCCTCCTTTCACTCAACCTCAATCAATACTAAC CACCAACTTTCCAGTTACCACCAGTGCATTTCATGCCAATCATTTTGCTTGGCAATGTAATATGAACCAAACAGTACCTAAGTTTGCTCCCAACCCTGTC TGGCAGGGGTGCCATCCTGTAGAATTTTCTCTTCCAGCACCTGTCCTTGAACCAATTCCTGATCACATTTTGCAGCCACAGGAACAGTGTAATGTTTCTC AAATTCCAGGTTCTACATTGGTTCTTCCGGAGGACGCGAATAATGTCAGGGAATCTAACGAAGAGGTGAAAGTTCTCGAATCAAAGACTAGTGAATATGA GTTTGGTAAAGTTCATCCAGAAATCGTAAAGGAAAATGCTGGGAACATGACAAATCATAATATCGGCTTGAATGAAAGTGTTGGCAATAGTGAAGAGAAC TTGGACGGTGGGAAAACTGTCAGCATTTTGATTCGGGGAAGAAGAAACCGGAAGCATTCTTTGAGAATGCCGATAAGTTTGCTTACTAGACCCAACAGCT CTCAGTCGTTTAAAGCTGTTTATAACCGCGTAATTAGAGGAAATGACGCCGTTCCGAAGTCCATCAACTTGTCTTCTGGTAAAGATTGTATAGCTACTGC TTAACTCAGTTCTTATTGTTACTAACAAGAAATAGTAGCAGAATTACTGCTGGTAACGAAGAGAGATACTTCATAATGTCACATACAGAAGGAGATGTGG TGCTTTAATCATCTTTGGAACTCAATTACAGTTTTCCTGCAGCTGTGTGGCTGCACTACCTTTTGGAATGTTAGATTCTTCTACATGGAGGTGGATGACT GGAGTTTTTTCTTCAATTTGAGGTTCTTTGCAGTGAGTTTGGGTTACAGAGGTGAACCTTCAATGTAACAAATTCAGTTAGGAAATTTTGATATTCTGAA TTAAATCATTAAAGACAGTTTCTAATTTTTTCTCAGTATTTTTAACACCATTTACAATGACATTGTCAATTAATTTGGGTCATTTGTATAGACTTATCAA TAATTTGCCAGGAATTAGTGGTTTTTTTTGTTGGTTGACTTGAGATTTAATCTAATTCTTATAATTGAAATCATGTGATGGATAAATTTTGAGTGATATA TTTTTCATAAATGGCAAGG
• Tissue: pods
• Gene name: LI_gene_188728;
• Additional information: details;

Expression of Ll_transcript_397373

FPKM

• PAB: 2
• PNAB: 6.9
• PS1: 3.7
• PS2: 3.1
• PS3: 3.7
• PW1: 3.7
• PW2: 6.4
• PW3: 4.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_397373

• Blastp: Protein TSS from Arabidopsis with 46.4% of identity
• Blastx: Protein TSS from Arabidopsis with 53.17% of identity
• Eggnog: Involved in proper cytoplasmic distribution of mitochondria (By similarity)(ENOG410XQUQ)
• Kegg: Link to kegg annotations (AT4G28080)
• CantataDB: Link to cantataDB annotations (CNT0001002)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019440439.1)
• Pfam: Translation initiation factor eIF3 subunit 135 (PF12807.6)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;