Ll_transcript_398115

• Id Trinity: TRINITY_DN51940_c1_g1_i3
• Name Transcript: Ll_transcript_398115
• Sequence: CGTTAATAAAGAAGAAGCGACTCTGTAAAAAGCGTAGCTTTGCTGATAAAAAGTTCAAATAGACAGCCACAGAGACATAAAGAGTCACAAAGAGTTCTAC AAATTACGCTATTCCTCCCCCTTGTGTTTATTATCGTACTCTGTCTTCGATTTTCGATTCAGGGAACAGTTTAAGAGTGTGTGGATCGGTAAAACAATCT CTGAGGTAAGATAAAGGGTTTCTATTTTTCTGCTATTTCTTCAATTTCTCTGGGGGGTTTTCAATTGGGTAGTTTTTTTCATTTTTTGTTACTACCCTGT TCTGAAATTGTATAAAAGATTGTTTTTTTATTGTTAAGTTTTGGTTTTTCTATTTGGGTTAGTGTTTGTGTCATTGAAATACAATTCTAGAGAACCGTGA ATTGGTTCATGAGTATCAATTTGTTCTTTTGCGAATTGGTTCCCAGGAACGAACCAGACTTTCACCAGTAAAATAAAGAACAAAAAAAAGAAGAGTAATT GATGATGTACACACTCAGATAGATAAATGAGTCACAACAAAGAGGAAAGAATTTATCTTTGGTATTTTTCCTATGGTGAATTAAAGTTGTTTCAAACCTA CAAAAAGCAAAACTGAAAGAGCCATAGAAACCGTATTGAGTATACCTCTAACGTTACCGAAGAGAATCGCCTATCACGTGATTATGGTTTGTGTTCTTTG TTTAAGTGACATGGATCAGTGGATTGTGTGGTGTTAAAAAGTTTTAATTTTTCATTCTTCCCATGTTTGATTTTGATTCCGGGGATGTTGTCAATTATAT ACTCGTTGAAGGTTGTTTATATTGATATTTGTTTTGTTGGGTTTTGTTGCATGCTTGAATTATTATTGAATATTGACTATTTGTTGATGACATGCTTGCC ATGGTGTTTGCATTATAATTGGCTTAGTAATAAGTGTTGACCATTTTGTTCTTGATGTAGCTCTTTGCTTATGTGGTATCTATTTGTTTAAGAACTTGCA AGAGCAATTTGCCATTATTTAGTTAATTCATTATTTTGCAAGTGAATCTGTGATGTTCGTTGTTTTTGTTTTTGTTTGTATTTTTTTATATCTTTTCTAT GGTTGTATACTGTTTTTGTCTTCTGAGAGCCTAAGGTGCTTCACTTGCAGGTGGTCGTGAAGTAATGGAGTCTCATGACGAGACAGGATGCCAGGCACAA GAGCGTCCCATACTTTGCGTTAACAATTGTGGCTTCTTCGGAAGGGCTGCTACGATGAACATGTGTTCCAAGTGCTACAAGGACATGCTGCTGAAGCAGG AGCAGGACAAACTTGCTGCATCATCGGTTGAAAACATTGTGAACGGAACATCCAATGGCAACGGAAAACAGGTTGTGAAATCAGCTGCCATTGATGTACA AGTTGAAACTGTGGAGGTCAAGACAATCTGCGCTGAGATTTCTGCTGATTCGTCCTCTGGTGAGAGTTTGCAAAACAAAGCCAAGACAGGTCCCAGCCGA TGCGCCACTTGCAAGAAGCGTGTCGGGCTAACTGGTTTCAGCTGCAAATGTGGAAACCTCTTCTGTGCAATGCATCGCTATTCTGATAAACATGATTGCC AATTTGATTATAGGACTGCCGGGCAGGATGCTATAGCTAAAGCCAACCCCATAATTAAGGCCGATAAGCTTGACAAAATATAGGCTTGAACTAAAGTACA AAGCTTGAAGCTTCGTCTTATATCAGCAAGTCGACGATCATATATATAGACTGCTTGGCTTTTTAGGTGTCCTTTAGTGATTAAAATGGTCAATGTCATG GTCAAAGGACATATTTTATGTAAAACTTTCACTCCTTGTTGATTGGTGAGATTCACTTGTTAGCTCCGGTGTGAGTGTTTGTGCTTGTTTGATGAACTCC TTTTGTAATTTGACTTGTGATTGATCTGCATTTTTTCTTCTTCCATGTTGCATGAACTGTATCCCTGCTTAGTTTTTCTGTGCTCTTGTTATTGAATTGT TTTAATAATGTTTAATTTGTTTCCTGTGACTACCCAATTTCGTTCAGGGTCTTTTTAGAATGTTCGGCCGAAAATCGGGGCGAGATATTTTGTATGCAC
• Tissue: pods
• Gene name: LI_gene_188736;
• Additional information: details;

Expression of Ll_transcript_398115

FPKM

• PAB: 1.1
• PNAB: 0.3
• PS1: 0.7
• PS2: 0.4
• PS3: 0.7
• PW1: 0.5
• PW2: 0.6
• PW3: 0.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_398115

• Blastp: Zinc finger A20 and AN1 domain-containing stress-associated protein 8 from Oryza sativa with 64.91% of identity
• Blastx: Zinc finger A20 and AN1 domain-containing stress-associated protein 8 from Oryza sativa with 64.91% of identity
• Eggnog: zinc finger(ENOG4111UWC)
• Kegg: Link to kegg annotations (4341520)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019444112.1)
• Pfam: A20-like zinc finger (PF01754.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;