Ll_transcript_398774

• Id Trinity: TRINITY_DN51944_c1_g2_i12
• Name Transcript: Ll_transcript_398774
• Sequence: AAAAAATAAATCTCATAAAAATGGAGTCTTTTTTTTGGCCATCTACAAATTATTTACTACTATAACCATTGTTATAAAATCTTGCGAAGAAAAATGGTTT CCGTTTAAGACCCTCTCGGCGCACGTTTAGCACCTTGCTAACCTGCGCATGTGGCCATGGCGAGTGGAAGAATTCGAGGGCTTATGAACAAATCAACACT AATAAATGCAGAAATTTGAAGGTTGATTTGGGAAAGACACAAATGACAGAGAATGATAAAGCAAAACAGTTCCAAGATTATCAAAGCAGCGATGGCCATT AAGCCTAAGGTATTAAACCCTTGGGGTAATTTTCATATTCCAAATTTAGAAATGTTGATGAAAACATAGTTAACTGGTACACTGTACTGGTATATGGTTC TTTGGACATGTGGTTTGTTACTTTTTAGGAGCTATTTTTTGTTACGAACTCGGTATGTGCTACGCGGTACATAGGATAAACGAGAGAATTATGTAACTAT TGTTAAGAAGTTACAGTTTATTGAGCCTATTGTAGGTGTGATAAGAGAATAGGGAAAATCATCATTGAAGATATACAATCTGAGATTGCTTTGTGTTGGG GGCTAACCCCACCTTTTTTTAGTCATGGAAGGATTTGTAAAGAAAATTTGGGGTCAACTAGGTGTGGAAAAAGTCGGAATAATGAAGCACGATATGTATT TGGTAAAATTCTCCAATGAAATCTGGTTTGAAATGAAGGGGGTATTATCATTGAGTAGCAAGTCTTTTGTATATGGAAACCCTTTCATTGTTCAGCTTGA CATGGATATGGACATACAACTTAAGATTTCAAAAAAGGTACCAAACAAGGCTAGAAAGGAAGGAAACAAAAGAATAATATCACACTGTACAAGAAGGAAA CAGTTTAAGATTGTTGATGATGAAAAAGGAAAATGTCAGCAGCCGAAATCAACTACTGAGACAAAAATAGACCAAGTTTCACCAGGCGAAGTCCAAATCA GTTGCAGATAACAGCAGCAAGCGAGCAATCTTATGTACATGCCGCACACGAGACACGACAAAGTAATGCTACTTCAATAGCTAACACTTCCGGTCAGCAA CCAAAAACAAGGCCAACACAGAGATCATCCAGAGCTTACTAGCTTCTGTAATTGAAGGAAGCATCTTATTGTGCACGTAGAATTGTTGGATTCGTGGTTT AAACATTTAGTGAAGTCCTCTCTTTTCATTGATATTGCCCTGGTGTGTACTTTTAAGGAAGGCAATAAAAAGAAAATTAGTCGCCTGAAGAAACAAACCG GCAAGGATGGAATGTAATAAAAATGATGCCTTAAAGGCTAAAGAGCTTGCAGAAGAGAAGCTTTTAAAGAAGGACTATGTTGGGGCAAAGATATATGCAA TCAAGGCTCGAGATTTGGATCCCAATCTTGTTGACCTTCCTCCATTGATGGCAGCGATTGAGGTGAATATCTCTGCTGAAAGAAGAGTTAATGGACAAGT TGATTGGTATGGGGTCCTTGGCGCACAACCCTTGTCAGATGATGTAACAATTCGAAGATGTTATAAGACACGGGTTCTTATGCTGCACCCCGATAAAAAT AAATCAGCAGTTGCACTTGAAGCATTTAAACTAGTCACACAGGCATGGAGTTTATTTTCTGATAAAGACCAGAAAATCATCTATGACCGAAACCTAATTT CATGGGGCAGATATATAGACATTCCTGGTGGGAAACCTTCTCTACCAGCTCGTCAGGATAGTTTCTACAATAATAATATTTTCAGCACTGCTAACTGCAT AGATAGAGATCAAATGAATGCTACGCATCCCATTCTTACTCCAGTATCTCCTGTGACATCGAAACAGACATTTTGGACCAGGTGTCGTTCCTGCGGCATA CAACTTGAGTACCATACTGTTTACATCAACTGCAAAATTATTTGCTTCAGCTGCCGTCAGCCCCTTTTGGCTCGTGAGGAACCACCCCCACCTGTATACA GAAATGACTCATCCACTTCAATAGTTTCTCAGATGAAGCAACATGGCTTCAGCTCAGCCAGAATTGAAAGAAACTGTCATGCTTCAGGAAGGAACCCAAT GTATGCTGTCAACTCATCACTTTGGTCAGGTCATCTCTCTACGCATGGTGGTATTTCCAGTGTGCTGGTTCCAGCTTCTTCTTCTGCTGCTGAAGCTCCT GGTGTTTATGGAATGTCTTCTGAGAATTTGAAGAGACGGTATGGCGATTCAACACCTGTCATCAGGGAGGAGGGCATTGTTGGGAAAACTCATGCTGGTG CGAGAAATGTTTCTGATTCATCTTCCAAACCCTCTTGTTTTGGTCCAAATTCTGTTTCGATAGCAGATAGCTCAAGGAAAATAAGGCGCACAGATGGAAA TCAAGTACATGGTGATGGAAGAGGCATGGAAGCCAAAATTGCATGTCAAAATGGAGGAATAAGATTTGCTAATCAGTTAGTATCTCAGAATGATAATGCT GCTGGATATTGTAAACGGAATGGTACTAAGGATGTATTACAGCAGCAATGGAGGACCATGTTGATCGAAAAGGCACGAAACTCTATTCATAAAAATCTTG GTGAATTGAAGGTCGCTTCTATACCAACAAATTCACGAAAGGAAAAGAACACTGATGCACAAATCAGAGTGAAGAAAGAGAGGGCTACAAGTGGGGTAAA ACATGCTGCCCCAGAATTGGTTGAATCTGAGACTGTAGGCAATAAGTGTTTCTCTGCTGACTCAGAAGTTACTGAGTTTCTCACCATGTGTGTTGCAGAC CCAGATTTCCATGATTTCGATGGGGACCGTATTGAAAACGCCTTTGGTAAGAATGAAATTTGGGCTGTCTATGATGATGATGATGGCATGCCACGCTTCT ATGCTTTAATCAACTGTGTGATTTCAAAAAAGCCTTTCAATATGAGGATCAGTTGGCTTAGCTCTAAGACCAATGATGAATTGGCCCCAATTAAGTGGGT CAGTGCTGGCTTCGCCAAGACTGTTGGGGATTTACGAATTGGTAAGCATGACGTCATTTCTACCACTCTTAATTCCTTCTCGCACAGGGTCAAGTGGACT AAAGGATCAAGAGGGCTTATACATATATATCCTATGAAGGGGGACGTTTGGGCTCTGTATCGAAACTGGTCTGTTGAATGGAATGAATTTACCAAAGATG AAATTGTACATAAGTATGACATGGTGGAAGTGCTTGATGACTACAGCGAGCGGCAAGGTGTAAGTGTTGCTCCGCTTGTTAAAGTTGCAGGTTTCAAGAC AGTATTCCGCAGGAATGAAGATCCAAAGAAAATTATGAATATTCCAAGGGCGGAGATGTTTCGCTTCTCACACCAGGTACCTTCATACTTGCTTACTGGT CAAGAAGGTCCTAATGCTCCTACTGGTTGCTTGGAGCTAGATCCTGCTGCTACACCCAATGAACTTCTCCAGACAAGCATAGAAGCTGCAGAGGAAGAAA TGACAATTGAGAAATCTTTAGAAGAGGAACCGATGCCCAATGTGACTTTCACAGAGGCTGCTGTCGAAGATGTGCCCACAAAAGAGGCGGCTGGCTCAAA CTAGAAAGGGGAAACAGGTCTGAGGTTTTGTTTTATACAAGCTGAAACCACCCTAAGGAATGAATAAGAGCCAGATTTGAATCTTTTAAATTTTTTACAA ATTTTTATTTATTAAAAACAATTAGTGAATGAACTTTTCTGCATTTGTAGCCCAATTATGAAGCTTTTCTTGTTTTCTCTGTATATTGGTGGGGCTGCAC TTTTGGTTTTAGTGTTTGGAGTTTCGTTCAAGTTTAATTTCTGCCGCATGTGACTCTGTCTGAAATGCCAATTAGTTACTGCAGTTTTTATGAGTCAATA ATGATATTTAGTAGCATTTAAGCTCATTCGAGTGGAGGGGTCTATATTTGTTTTTCTGGTTGCTTTGTATCTCACAACCCACCACTTTTTTTTGGCATCA ATTTCTTGATTAATTGCTTAGTTTATGCCTTAGATTGACAGTGATTATATGTCTGTATTTTACATTGTGACTGTTGATTTTTAATGACGAGTTTGTTCTA AATTTTATGTATTATTCTATTATTAAGCATTTGAGTTTTGTCGAATTATTTATATAATAATTAGATTCCTTAAATGTCATTCATCTTAGCCGCATTTTCT TAAATGTCTTATGGAAAATTTGAGGCACTACTACTTTCCTAAGTGGATATTTTATTATTCATATTATCATTGTTTTTATATTATAGAAATTTGATAAAGT TTTATGTTGGTCGTCAACTTTTTAACGCAATCTTCTCATTTTATCTGGTTGGGCATAAATGAGAATGTTGTGTTAGATGAGTGTACAAACAAGACAAGAT ATGATTATAAATCATAGGGGAACCGATCATGAAAGATTTAGAAATTATTTATTTATTGATGGACATGACTTATATGATGATTTCTTTCTATCCAGGAGCC AATTCCATCTAGTGAGAATAAATGTTGGGTTGTTGCATTAGGGCATGCAAATATACAAATGCTACATTCAAAATTATGATATGTTGCATTACTTTGTGAC TTTTAATGTTATA
• Tissue: pods
• Gene name: LI_gene_188778;
• Additional information: details;

Expression of Ll_transcript_398774

FPKM

• PAB: 0
• PNAB: 0.1
• PS1: 0.3
• PS2: 0.3
• PS3: 0.2
• PW1: 0.3
• PW2: 0.3
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_398774

• Blastp: J protein JJJ2 from Eremothecium with 33.67% of identity
• Blastx: J protein JJJ2 from Eremothecium with 33.67% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (AGOS_AEL112C)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019415359.1)
• Pfam: DnaJ domain (PF00226.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;